Commit fb1a0772 authored by Emmanuel Bertin's avatar Emmanuel Bertin
Browse files

Moved codebase to new autogen.sh pre-configure stage.

Replaced doc PDF with (very preliminary) Sphinx source.
Pushed version number to 2.24.
parent 779e15bc
#
# Makefile.am
#
# Main Makefile. Process this file with automake to generate a Makefile
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#
# This file part of: an AstrOmatic package
#
# Copyright: (C) 2017 IAP/CNRS/UPMC
#
# License: GNU General Public License
#
# AstrOmatic software is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License as published
# by the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# AstrOmatic software is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
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# along with AstrOmatic software. If not, see
# <http://www.gnu.org/licenses/>.
#
# Last modified: 13/06/2017
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
EXTRA_DIST = compat control rules
The files in that subdirectory are for building custom, optimized binary Debian packages with the command make deb (using gcc) or make deb-best (using icc/MKL). They are not meant to be used for building packages of the official Debian/Ubuntu distros.
@PACKAGE_TARNAME@ (@PACKAGE_VERSION@-1) UNRELEASED; urgency=low
* Automatic Debian release.
-- @PACKAGER@ <@PACKAGE_BUGREPORT@> @DATE1@
#
# control
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#
# This file part of: SCAMP
#
# Copyright: (C) 2006-2017 IAP/CNRS/UPMC
#
# License: GNU General Public License
#
# SCAMP is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# SCAMP is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with SCAMP. If not, see <http://www.gnu.org/licenses/>.
#
# Last modified: 19/06/2017
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
Source: sextractor
Section: science
Priority: optional
Maintainer: Emmanuel Bertin <bertin@iap.fr>
Build-Depends: debhelper (>= 9)
Homepage: http://astromatic.net/software/sextractor
Package: sextractor
Architecture: any
Depends: ${misc:Depends}, ${shlibs:Depends}
Description: Extract catalogs of sources from astronomical images
#! /usr/bin/make -f
# These are used for cross-compiling and for saving the configure script
# from having to guess our platform (since we know it already)
DEB_HOST_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
DEB_BUILD_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
DEB_BUILD_ARCH ?= $(shell dpkg-architecture -qDEB_BUILD_ARCH)
DEB_BUILD_OPTIONS = noddebs
%:
dh $@ --parallel --with autoreconf
override_dh_auto_configure:
ifeq ($(USE_BEST),1)
dh_auto_configure -- --host=$(DEB_HOST_GNU_TYPE) \
--build=$(DEB_BUILD_GNU_TYPE) \
--prefix=/usr --mandir=\$${prefix}/share/man \
--enable-icc --enable-mkl \
--enable-auto-flags --enable-best-link
else
ifeq ($(USE_ICC),1)
dh_auto_configure -- --host=$(DEB_HOST_GNU_TYPE) \
--build=$(DEB_BUILD_GNU_TYPE) \
--prefix=/usr --mandir=\$${prefix}/share/man \
--enable-icc
else
dh_auto_configure -- --host=$(DEB_HOST_GNU_TYPE) \
--build=$(DEB_BUILD_GNU_TYPE) \
--prefix=/usr --mandir=\$${prefix}/share/man
endif
endif
override_dh_installchangelogs:
dh_installchangelogs ChangeLog
#
# Makefile.am
#
# Makefile for Sphinx documentation.
# Process this file with automake to generate a Makefile
#
EXTRA_DIST = requirements.txt TODO src theme
# You can set these variables from the command line.
SPHINXOPTS =
SPHINXBUILD = sphinx-build
PAPER =
BUILDDIR = build
# Internal variables.
PAPEROPT_a4 = -D latex_paper_size=a4
PAPEROPT_letter = -D latex_paper_size=letter
ALLSPHINXOPTS = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) src
# the i18n builder cannot share the environment and doctrees with the others
I18NSPHINXOPTS = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) src
all:
pdf: latexpdf
.PHONY: help
help:
@echo "Please use \`make <target>' where <target> is one of"
@echo " html to make standalone HTML files"
@echo " dirhtml to make HTML files named index.html in directories"
@echo " singlehtml to make a single large HTML file"
@echo " pickle to make pickle files"
@echo " json to make JSON files"
@echo " htmlhelp to make HTML files and a HTML help project"
@echo " qthelp to make HTML files and a qthelp project"
@echo " applehelp to make an Apple Help Book"
@echo " devhelp to make HTML files and a Devhelp project"
@echo " epub to make an epub"
@echo " epub3 to make an epub3"
@echo " latex to make LaTeX files, you can set PAPER=a4 or PAPER=letter"
@echo " latexpdf to make LaTeX files and run them through pdflatex"
@echo " latexpdfja to make LaTeX files and run them through platex/dvipdfmx"
@echo " text to make text files"
@echo " man to make manual pages"
@echo " texinfo to make Texinfo files"
@echo " info to make Texinfo files and run them through makeinfo"
@echo " gettext to make PO message catalogs"
@echo " changes to make an overview of all changed/added/deprecated items"
@echo " xml to make Docutils-native XML files"
@echo " pseudoxml to make pseudoxml-XML files for display purposes"
@echo " linkcheck to check all external links for integrity"
@echo " doctest to run all doctests embedded in the documentation (if enabled)"
@echo " coverage to run coverage check of the documentation (if enabled)"
@echo " dummy to check syntax errors of document sources"
.PHONY: clean
clean:
rm -rf $(BUILDDIR)/*
.PHONY: html
html:
$(SPHINXBUILD) -b html $(ALLSPHINXOPTS) $(BUILDDIR)/html
@echo
@echo "Build finished. The HTML pages are in $(BUILDDIR)/html."
.PHONY: dirhtml
dirhtml:
$(SPHINXBUILD) -b dirhtml $(ALLSPHINXOPTS) $(BUILDDIR)/dirhtml
@echo
@echo "Build finished. The HTML pages are in $(BUILDDIR)/dirhtml."
.PHONY: singlehtml
singlehtml:
$(SPHINXBUILD) -b singlehtml $(ALLSPHINXOPTS) $(BUILDDIR)/singlehtml
@echo
@echo "Build finished. The HTML page is in $(BUILDDIR)/singlehtml."
.PHONY: pickle
pickle:
$(SPHINXBUILD) -b pickle $(ALLSPHINXOPTS) $(BUILDDIR)/pickle
@echo
@echo "Build finished; now you can process the pickle files."
.PHONY: json
json:
$(SPHINXBUILD) -b json $(ALLSPHINXOPTS) $(BUILDDIR)/json
@echo
@echo "Build finished; now you can process the JSON files."
.PHONY: htmlhelp
htmlhelp:
$(SPHINXBUILD) -b htmlhelp $(ALLSPHINXOPTS) $(BUILDDIR)/htmlhelp
@echo
@echo "Build finished; now you can run HTML Help Workshop with the" \
".hhp project file in $(BUILDDIR)/htmlhelp."
.PHONY: qthelp
qthelp:
$(SPHINXBUILD) -b qthelp $(ALLSPHINXOPTS) $(BUILDDIR)/qthelp
@echo
@echo "Build finished; now you can run "qcollectiongenerator" with the" \
".qhcp project file in $(BUILDDIR)/qthelp, like this:"
@echo "# qcollectiongenerator $(BUILDDIR)/qthelp/SExtractor.qhcp"
@echo "To view the help file:"
@echo "# assistant -collectionFile $(BUILDDIR)/qthelp/SExtractor.qhc"
.PHONY: applehelp
applehelp:
$(SPHINXBUILD) -b applehelp $(ALLSPHINXOPTS) $(BUILDDIR)/applehelp
@echo
@echo "Build finished. The help book is in $(BUILDDIR)/applehelp."
@echo "N.B. You won't be able to view it unless you put it in" \
"~/Library/Documentation/Help or install it in your application" \
"bundle."
.PHONY: devhelp
devhelp:
$(SPHINXBUILD) -b devhelp $(ALLSPHINXOPTS) $(BUILDDIR)/devhelp
@echo
@echo "Build finished."
@echo "To view the help file:"
@echo "# mkdir -p $$HOME/.local/share/devhelp/SExtractor"
@echo "# ln -s $(BUILDDIR)/devhelp $$HOME/.local/share/devhelp/SExtractor"
@echo "# devhelp"
.PHONY: epub
epub:
$(SPHINXBUILD) -b epub $(ALLSPHINXOPTS) $(BUILDDIR)/epub
@echo
@echo "Build finished. The epub file is in $(BUILDDIR)/epub."
.PHONY: epub3
epub3:
$(SPHINXBUILD) -b epub3 $(ALLSPHINXOPTS) $(BUILDDIR)/epub3
@echo
@echo "Build finished. The epub3 file is in $(BUILDDIR)/epub3."
.PHONY: latex
latex:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo
@echo "Build finished; the LaTeX files are in $(BUILDDIR)/latex."
@echo "Run \`make' in that directory to run these through (pdf)latex" \
"(use \`make latexpdf' here to do that automatically)."
.PHONY: latexpdf
latexpdf:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo "Running LaTeX files through pdflatex..."
$(MAKE) -C $(BUILDDIR)/latex all-pdf
@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
.PHONY: latexpdfja
latexpdfja:
$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
@echo "Running LaTeX files through platex and dvipdfmx..."
$(MAKE) -C $(BUILDDIR)/latex all-pdf-ja
@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
.PHONY: text
text:
$(SPHINXBUILD) -b text $(ALLSPHINXOPTS) $(BUILDDIR)/text
@echo
@echo "Build finished. The text files are in $(BUILDDIR)/text."
.PHONY: man
man:
$(SPHINXBUILD) -b man $(ALLSPHINXOPTS) $(BUILDDIR)/man
@echo
@echo "Build finished. The manual pages are in $(BUILDDIR)/man."
.PHONY: texinfo
texinfo:
$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
@echo
@echo "Build finished. The Texinfo files are in $(BUILDDIR)/texinfo."
@echo "Run \`make' in that directory to run these through makeinfo" \
"(use \`make info' here to do that automatically)."
.PHONY: info
info:
$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
@echo "Running Texinfo files through makeinfo..."
make -C $(BUILDDIR)/texinfo info
@echo "makeinfo finished; the Info files are in $(BUILDDIR)/texinfo."
.PHONY: gettext
gettext:
$(SPHINXBUILD) -b gettext $(I18NSPHINXOPTS) $(BUILDDIR)/locale
@echo
@echo "Build finished. The message catalogs are in $(BUILDDIR)/locale."
.PHONY: changes
changes:
$(SPHINXBUILD) -b changes $(ALLSPHINXOPTS) $(BUILDDIR)/changes
@echo
@echo "The overview file is in $(BUILDDIR)/changes."
.PHONY: linkcheck
linkcheck:
$(SPHINXBUILD) -b linkcheck $(ALLSPHINXOPTS) $(BUILDDIR)/linkcheck
@echo
@echo "Link check complete; look for any errors in the above output " \
"or in $(BUILDDIR)/linkcheck/output.txt."
.PHONY: doctest
doctest:
$(SPHINXBUILD) -b doctest $(ALLSPHINXOPTS) $(BUILDDIR)/doctest
@echo "Testing of doctests in the sources finished, look at the " \
"results in $(BUILDDIR)/doctest/output.txt."
.PHONY: coverage
coverage:
$(SPHINXBUILD) -b coverage $(ALLSPHINXOPTS) $(BUILDDIR)/coverage
@echo "Testing of coverage in the sources finished, look at the " \
"results in $(BUILDDIR)/coverage/python.txt."
.PHONY: xml
xml:
$(SPHINXBUILD) -b xml $(ALLSPHINXOPTS) $(BUILDDIR)/xml
@echo
@echo "Build finished. The XML files are in $(BUILDDIR)/xml."
.PHONY: pseudoxml
pseudoxml:
$(SPHINXBUILD) -b pseudoxml $(ALLSPHINXOPTS) $(BUILDDIR)/pseudoxml
@echo
@echo "Build finished. The pseudo-XML files are in $(BUILDDIR)/pseudoxml."
.PHONY: dummy
dummy:
$(SPHINXBUILD) -b dummy $(ALLSPHINXOPTS) $(BUILDDIR)/dummy
@echo
@echo "Build finished. Dummy builder generates no files."
The present documentation of SExtractor is still very incomplete: this
is rather a ``proto-documentation''. Chapters are missing. The english
is so-so. We will progressively upgrade the documentation during 2011.
Emmanuel Bertin.
sphinxcontrib-bibtex
.. File Installing.rst
Installing the software
=======================
Hardware requirements
---------------------
|SExtractor| runs in (ANSI) text-mode from a shell. A graphical environment
is not necessary to operate the software.
Memory requirements depend on the size of the images to be processed.
Processing a single image should typically require about 100MB of memory.
For large images (hundreds of Mpixels or more), or in double-image / weighted
mode, |SExtractor|'s memory footprint should be around 500MB, and up to 2GB in
the worst cases. Swap-space can be put to contribution, although a strong
performance hit is to be expected.
Obtaining |SExtractor|
----------------------
For Linux users, the simplest way to have |SExtractor| up and running is to
install the standard binary package the comes with your Linux distribution.
Run, e.g., ``apt-get sextractor`` (on Debian) or ``dnf sextractor`` (Fedora) as
root and |SExtractor|, as well as all its dependencies, will automatically be
installed. If you decided to install the package this way you may skip the
following and move straight to the :ref:`next section <using_SExtractor>`.
However if |SExtractor| is not available in your distribution, or to obtain the
most recent version, the |SExtractor| source package can be downloaded from
`the official GitHub repository <https://github.com/astromatic/sextractor>`_ .
One may choose `one of the stable releases
<https://github.com/astromatic/sextractor/releases>`_, or for the fearless,
`a copy of the current master development branch
<https://github.com/astromatic/sextractor/archive/master.zip>`_.
Software requirements
---------------------
|SExtractor| has been developed on
`GNU/Linux <http://en.wikipedia.org/wiki/Linux>`_ machines and should compile on
any `POSIX <http://en.wikipedia.org/wiki/POSIX>`_-compliant system (this
includes |OSX|_ and `Cygwin <http://www.cygwin.com>`_ on |Windows|_, at the
price of some difficulties with the configuration), provided that the
*development* packages of the following libraries have been installed:
* |ATLAS|_ V3.6 and above [#atlas_install]_,
* |FFTw|_ V3.0 and above [#fftw_install]_,
On Fedora/Redhat distributions for instance, the development packages above are
available as ``atlas-devel`` and ``fftw-devel``. Note that |ATLAS| and |FFTw|
are not necessary if |SExtractor| is linked with |Intel|'s |MKL|_ library.
Installation
------------
To install from the |GitHub| source package, you must first uncompress the
archive:
.. code-block:: console
$ unzip sextractor-<version>.zip
A new directory called :file:`sextractor-<version>` should now appear at the
current location on your disk. Enter the directory and generate the files
required by the `autotools <http://en.wikipedia.org/wiki/GNU_Build_System>`_,
which the package relies on:
.. code-block:: console
$ cd sextractor-<version>
$ sh autogen.sh
A :program:`configure` script is created. This script has many options, which
may be listed with the ``--help`` option:
.. code-block:: console
$ ./configure --help
No options are required for compiling with the default GNU C compiler
(:program:`gcc`) if all the required libraries are installed at their default
locations:
.. code-block:: console
$ ./configure
Compared to :program:`gcc` and the librairies above, the combination of the
|Intel| compiler (:program:`icc`) and the |MKL|_ libraries can give the
|SExtractor| executable a strong boost in performance, thanks to better
vectorized code. If :program:`icc` and the |MKL| are installed on your system
[#geticc]_ , you can take advantage of them using
.. code-block:: console
$ ./configure --enable-mkl
Additionally, if the |SExtractor| binary is to be run on a different machine
that does not have :program:`icc` and the |MKL| installed (e.g., a cluster
computing node), you must configure a partially statically linked executable
using
.. code-block:: console
$ ./configure --enable-mkl --enable-auto-flags --enable-best-link
In all cases, |SExtractor| can now be compiled with
.. code-block:: console
$ make -j
An :file:`src/sex` executable is created. For system-wide installation, run
the usual
.. code-block:: console
$ sudo make install
You may now check that the software is properly installed by simply
typing in your shell:
.. code-block:: console
$ sex
which will return the version number and other basic information (note that
some shells require the :program:`rehash` command to be run before making a
freshly installed executable accessible in the execution path).
.. [#mac_install] Mac OS X |.dmg|_ packages should be available soon.
.. [#atlas_install] Use the ``--with-atlas`` and/or
``--with-atlas-incdir`` options of the |SExtractor| :command:`configure`
script to specify the |ATLAS| library and include paths if |ATLAS| files are
installed at unusual locations.
.. [#fftw_install] Make sure that |FFTW| has been compiled with
:command:`configure` options ``--enable-threads --enable-float``.
.. [#geticc] The Linux versions of the |Intel| compiler and |MKL| are
`available for free to academic researchers, students, educators and open
source contributors <http://software.intel.com/qualify-for-free-software>`_.
.. include:: keys.rst
.. File Introduction.rst
Introduction
============
|SExtractor|_ (Source-Extractor) is a program that builds a catalogue
of objects from an astronomical image. It is particularly oriented
towards the reduction of large scale galaxy-survey data, but it also performs
well on moderately crowded star fields. Its main features are:
* Support for multi-extension FITS (|MEF|_)
* Speed: up to about 50 Mpixel/s or 10,000 sources/s with a 3 GHz processor
* Ability to work with very large images (up to 2Gx2G pixels on 64 bit machines)
thanks to buffered image access
* Real-time filtering of images to improve detectability
* Robust deblending of overlapping extended objects
* Flexible catalogue output of desired parameters only
* Pixel-to-pixel photometry in dual-image mode
* Fast and accurate Point-Spread-Function and galaxy model fitting.
* Handling of weight maps and flag maps.
* Optimum handling of images with variable SNR.
* Built-in catalogue cross-identification.
* Special mode for photographic scans.
* |XML|_ |VOTable|_-compliant catalogue output.
* |XSLT|_ filter sheet provided for convenient access to metadata from a
regular web browser.
.. include:: keys.rst
.. File License.rst
License
=======
|SExtractor|_ *is free software: you can redistribute it and/or modify it under
the terms of the GNU General Public License as published by the Free
Software Foundation, either version 3 of the License, or (at your
option) any later version.* |SExtractor| *is distributed in the hope that it will
be useful, but WITHOUT ANY WARRANTY; without even the implied warranty
of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details. You should have received a copy
of the GNU General Public License along with* |SExtractor|. *If not, see*
`www.gnu.org/licenses/ <http://www.gnu.org/licences/>`_.
.. include:: keys.rst
# -*- coding: utf-8 -*-
#
# SCAMP documentation build configuration file, created by
# sphinx-quickstart on Tue Sep 27 15:11:21 2016.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))
import sphinx_rtd_theme
# -- General configuration ------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
# 'sphinx.ext.intersphinx',
# 'sphinx.ext.todo',
'sphinx.ext.mathjax',
'sphinxcontrib.bibtex',
'sphinx.ext.githubpages'
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'
# The encoding of source files.
#
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = u'SCAMP'
filename = 'scamp'
copyright = u'2016, IAP/CNRS/UPMC'
author = u'E. Bertin, A. Moneti'
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = '2.5.0'
# The full version, including alpha/beta/rc tags.
release = '2.5.0'
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
today = 'Sun May 28 2017'
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['keys.rst']
# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True
# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True
numfig = True
# -- Options for HTML output ----------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'sphinx_rtd_theme'
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
#
# html_theme_options = {}
# Add any paths that contain custom themes here, relative to this directory.
html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]
# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = u'SCAMP v2.5'
# A shorter title for the navigation bar. Default is the same as html_title.
#
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
# html_logo = None
# The name of an image file (relative to this directory) to use as a favicon of
# the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['../theme']
# Trick for having ReadTheDocs read custom theme changes
def setup(app):
app.add_stylesheet("css/custom.css")
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []
# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}
# If false, no module index is generated.
#
# html_domain_indices = True
# If false, no index is generated.
#
# html_use_index = True
# If true, the index is split into individual pages for each letter.
#
# html_split_index = False
# If true, links to the reST sources are added to the pages.
#
html_show_sourcelink = False
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
html_show_sphinx = False
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
#
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
# 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
# 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'
# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}
# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'
# Output file base name for HTML help builder.
htmlhelp_basename = filename + 'doc'
# -- Options for LaTeX output ---------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#
'papersize': 'a4paper',
# The font size ('10pt', '11pt' or '12pt').
#
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
#
'preamble': '\usepackage{amssymb}',
# Latex figure (float) alignment
#
# 'figure_align': 'htbp',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, filename + '.tex', project + u' Documentation',
author, 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False
# If true, show page references after internal links.
#
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
#
latex_show_urls = 'footnote'
# Documents to append as an appendix to all manuals.
#
# latex_appendices = []
# It false, will not define \strong, \code, itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True
# If false, no module index is generated.
#
# latex_domain_indices = True
# -- Options for manual page output ---------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, filename, project + u' Documentation',
author, 1)
]
# If true, show URL addresses after external links.
#
# man_show_urls = False
# -- Options for Texinfo output -------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, filename, project + u' Documentation',
author, project, 'One line description of project.',
'Miscellaneous'),
]
# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []
# If false, no module index is generated.
#
# texinfo_domain_indices = True
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'
# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False
# -- Options for Epub output ----------------------------------------------
# Bibliographic Dublin Core info.
epub_title = project
epub_author = author
epub_publisher = author
epub_copyright = copyright
# The basename for the epub file. It defaults to the project name.
# epub_basename = project
# The HTML theme for the epub output. Since the default themes are not
# optimized for small screen space, using the same theme for HTML and epub
# output is usually not wise. This defaults to 'epub', a theme designed to save
# visual space.
#
# epub_theme = 'epub'
# The language of the text. It defaults to the language option
# or 'en' if the language is not set.
#
# epub_language = ''
# The scheme of the identifier. Typical schemes are ISBN or URL.
# epub_scheme = ''
# The unique identifier of the text. This can be a ISBN number
# or the project homepage.
#
# epub_identifier = ''
# A unique identification for the text.
#
# epub_uid = ''
# A tuple containing the cover image and cover page html template filenames.
#
# epub_cover = ()
# A sequence of (type, uri, title) tuples for the guide element of content.opf.
#
# epub_guide = ()
# HTML files that should be inserted before the pages created by sphinx.
# The format is a list of tuples containing the path and title.
#
# epub_pre_files = []
# HTML files that should be inserted after the pages created by sphinx.
# The format is a list of tuples containing the path and title.
#
# epub_post_files = []
# A list of files that should not be packed into the epub file.
epub_exclude_files = ['search.html']
# The depth of the table of contents in toc.ncx.
#
# epub_tocdepth = 3
# Allow duplicate toc entries.
#
# epub_tocdup = True
# Choose between 'default' and 'includehidden'.
#
# epub_tocscope = 'default'
# Fix unsupported image types using the Pillow.
#
# epub_fix_images = False
# Scale large images.
#
# epub_max_image_width = 0
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# epub_show_urls = 'inline'
# If false, no index is generated.
#
# epub_use_index = True
# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'https://docs.python.org/': None}
# -- Options for pybtex ----------------------------------------------
from pybtex.style.formatting.unsrt import Style as UnsrtStyle, date, pages, toplevel
from pybtex.style.template import * # ... and anything else needed
from pybtex.plugin import register_plugin
class ADSArxivStyle(UnsrtStyle):
def format_article(self, e):
volume_and_pages = first_of [
# volume and pages, with optional issue number
optional [
join [
field('volume'),
optional['(', field('number'),')'],
':', pages
],
],
# pages only
words ['pages', pages],
]
myurl = first_of [
optional_field('adsurl'),
join ['http://arxiv.org/abs/', optional_field('eprint')],
optional_field('url'),
optional [join ['http://dx.doi.org/', field('doi')]]
]
template = toplevel [
self.format_names('author'),
href [myurl, self.format_title(e, 'title')] \
if len(myurl.format_data(e)) > 0 \
else tag('strong') [self.format_title(e, 'title')],
sentence(capfirst=False) [
tag('emph') [field('journal')],
optional[ volume_and_pages ],
field('year')],
sentence(capfirst=False) [ optional_field('note') ],
]
return template.format_data(e)
def format_inproceedings(self, e):
myurl = first_of [
optional_field('adsurl'),
optional [join ['http://arxiv.org/abs/', field('eprint')]],
optional_field('url'),
optional [join ['http://dx.doi.org/', field('doi')]]
]
template = toplevel [
sentence [self.format_names('author')],
href [myurl, self.format_title(e, 'title')] \
if len(myurl.format_data(e)) > 0 \
else tag('strong') [self.format_title(e, 'title')],
words [
'In',
sentence(capfirst=False) [
optional[ self.format_editor(e, as_sentence=False) ],
self.format_btitle(e, 'booktitle', as_sentence=False),
self.format_volume_and_series(e, as_sentence=False),
optional[ pages ],
],
self.format_address_organization_publisher_date(e),
],
sentence(capfirst=False) [ optional_field('note') ],
]
return template.format_data(e)
register_plugin('pybtex.style.formatting', 'adsarxiv', ADSArxivStyle)
# -*- coding: utf-8 -*-
#
# @PACKAGE_NAME@ documentation build configuration file, created by
# sphinx-quickstart on Tue Sep 27 15:11:21 2016.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))
import sphinx_rtd_theme
# -- General configuration ------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
# 'sphinx.ext.intersphinx',
# 'sphinx.ext.todo',
'sphinx.ext.mathjax',
'sphinxcontrib.bibtex',
'sphinx.ext.githubpages'
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'
# The encoding of source files.
#
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = u'@PACKAGE_NAME@'
filename = '@PACKAGE_TARNAME@'
copyright = u'2017, IAP/CNRS/UPMC'
author = u'E. Bertin'
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = '@PACKAGE_VERSION@'
# The full version, including alpha/beta/rc tags.
release = '@PACKAGE_VERSION@'
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
today = '@DATE2@'
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['keys.rst']
# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True
# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True
numfig = True
# -- Options for HTML output ----------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'sphinx_rtd_theme'
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
#
# html_theme_options = {}
# Add any paths that contain custom themes here, relative to this directory.
html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]
# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = u'@PACKAGE_NAME@ v@PACKAGE_VERSION@'
# A shorter title for the navigation bar. Default is the same as html_title.
#
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
# html_logo = None
# The name of an image file (relative to this directory) to use as a favicon of
# the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['../theme']
# Trick for having ReadTheDocs read custom theme changes
def setup(app):
app.add_stylesheet("css/custom.css")
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []
# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}
# If false, no module index is generated.
#
# html_domain_indices = True
# If false, no index is generated.
#
# html_use_index = True
# If true, the index is split into individual pages for each letter.
#
# html_split_index = False
# If true, links to the reST sources are added to the pages.
#
html_show_sourcelink = False
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
html_show_sphinx = False
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
#
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
# 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
# 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'
# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}
# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'
# Output file base name for HTML help builder.
htmlhelp_basename = filename + 'doc'
# -- Options for LaTeX output ---------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#
'papersize': 'a4paper',
# The font size ('10pt', '11pt' or '12pt').
#
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
#
'preamble': '\usepackage{amssymb}',
# Latex figure (float) alignment
#
# 'figure_align': 'htbp',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, filename + '.tex', project + u' Documentation',
author, 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False
# If true, show page references after internal links.
#
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
#
latex_show_urls = 'footnote'
# Documents to append as an appendix to all manuals.
#
# latex_appendices = []
# It false, will not define \strong, \code, itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True
# If false, no module index is generated.
#
# latex_domain_indices = True
# -- Options for manual page output ---------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, filename, project + u' Documentation',
author, 1)
]
# If true, show URL addresses after external links.
#
# man_show_urls = False
# -- Options for Texinfo output -------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, filename, project + u' Documentation',
author, project, 'One line description of project.',
'Miscellaneous'),
]
# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []
# If false, no module index is generated.
#
# texinfo_domain_indices = True
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'
# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False
# -- Options for Epub output ----------------------------------------------
# Bibliographic Dublin Core info.
epub_title = project
epub_author = author
epub_publisher = author
epub_copyright = copyright
# The basename for the epub file. It defaults to the project name.
# epub_basename = project
# The HTML theme for the epub output. Since the default themes are not
# optimized for small screen space, using the same theme for HTML and epub
# output is usually not wise. This defaults to 'epub', a theme designed to save
# visual space.
#
# epub_theme = 'epub'
# The language of the text. It defaults to the language option
# or 'en' if the language is not set.
#
# epub_language = ''
# The scheme of the identifier. Typical schemes are ISBN or URL.
# epub_scheme = ''
# The unique identifier of the text. This can be a ISBN number
# or the project homepage.
#
# epub_identifier = ''
# A unique identification for the text.
#
# epub_uid = ''
# A tuple containing the cover image and cover page html template filenames.
#
# epub_cover = ()
# A sequence of (type, uri, title) tuples for the guide element of content.opf.
#
# epub_guide = ()
# HTML files that should be inserted before the pages created by sphinx.
# The format is a list of tuples containing the path and title.
#
# epub_pre_files = []
# HTML files that should be inserted after the pages created by sphinx.
# The format is a list of tuples containing the path and title.
#
# epub_post_files = []
# A list of files that should not be packed into the epub file.
epub_exclude_files = ['search.html']
# The depth of the table of contents in toc.ncx.
#
# epub_tocdepth = 3
# Allow duplicate toc entries.
#
# epub_tocdup = True
# Choose between 'default' and 'includehidden'.
#
# epub_tocscope = 'default'
# Fix unsupported image types using the Pillow.
#
# epub_fix_images = False
# Scale large images.
#
# epub_max_image_width = 0
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# epub_show_urls = 'inline'
# If false, no index is generated.
#
# epub_use_index = True
# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'https://docs.python.org/': None}
# -- Options for pybtex ----------------------------------------------
from pybtex.style.formatting.unsrt import Style as UnsrtStyle, date, pages, toplevel
from pybtex.style.template import * # ... and anything else needed
from pybtex.plugin import register_plugin
class ADSArxivStyle(UnsrtStyle):
def format_article(self, e):
volume_and_pages = first_of [
# volume and pages, with optional issue number
optional [
join [
field('volume'),
optional['(', field('number'),')'],
':', pages
],
],
# pages only
words ['pages', pages],
]
myurl = first_of [
optional_field('adsurl'),
join ['http://arxiv.org/abs/', optional_field('eprint')],
optional_field('url'),
optional [join ['http://dx.doi.org/', field('doi')]]
]
template = toplevel [
self.format_names('author'),
href [myurl, self.format_title(e, 'title')] \
if len(myurl.format_data(e)) > 0 \
else tag('strong') [self.format_title(e, 'title')],
sentence(capfirst=False) [
tag('emph') [field('journal')],
optional[ volume_and_pages ],
field('year')],
sentence(capfirst=False) [ optional_field('note') ],
]
return template.format_data(e)
def format_inproceedings(self, e):
myurl = first_of [
optional_field('adsurl'),
optional [join ['http://arxiv.org/abs/', field('eprint')]],
optional_field('url'),
optional [join ['http://dx.doi.org/', field('doi')]]
]
template = toplevel [
sentence [self.format_names('author')],
href [myurl, self.format_title(e, 'title')] \
if len(myurl.format_data(e)) > 0 \
else tag('strong') [self.format_title(e, 'title')],
words [
'In',
sentence(capfirst=False) [
optional[ self.format_editor(e, as_sentence=False) ],
self.format_btitle(e, 'booktitle', as_sentence=False),
self.format_volume_and_series(e, as_sentence=False),
optional[ pages ],
],
self.format_address_organization_publisher_date(e),
],
sentence(capfirst=False) [ optional_field('note') ],
]
return template.format_data(e)
register_plugin('pybtex.style.formatting', 'adsarxiv', ADSArxivStyle)
.. SExtractor documentation master file, created by
sphinx-quickstart on Tue Sep 27 15:11:21 2016.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
======================
SExtractor User Manual
======================
Contents
--------
.. toctree::
:numbered:
:maxdepth: 2
Introduction
Installing
references
Indices and tables
------------------
* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
.. |ATLAS| replace:: :program:`ATLAS`
.. _ATLAS: http://math-atlas.sourceforge.net
.. |.dmg| replace:: :file:`.dmg`
.. _.dmg: https://en.wikipedia.org/wiki/Apple_Disk_Image
.. |FFTw| replace:: :program:`FFTw`
.. _FFTw: http://www.fftw.org
.. |FITS| replace:: :abbr:`FITS (Flexible Image Transport System)`
.. _FITS: http://fits.gsfc.nasa.gov
.. |fv| replace:: :program:`fv`
.. _fv: http://heasarc.gsfc.nasa.gov/ftools/fv/
.. |GitHub| replace:: GitHub
.. _GitHub: https://github.com
.. |Intel| replace:: Intel\ :sup:`®`\
.. _Intel: http://intel.com
.. |MEF| replace:: :abbr:`MEF (Multi-Extension FITS)`
.. _MEF: http://www.stsci.edu/hst/HST_overview/documents/datahandbook/intro_ch23.html
.. |MKL| replace:: :abbr:`MKL (Math Kernel Library)`
.. _MKL: http://software.intel.com/intel-mkl
.. |OSX| replace:: Apple OS X\ :sup:`®`\
.. _OSX: http://www.apple.com/osx
.. |PSFEx| replace:: :program:`PSFEx`
.. _PSFEx: http://astromatic.net/software/psfex
.. |RPM| replace:: :program:`RPM`
.. _RPM: http://www.rpm.org
.. |SCAMP| replace:: :program:`SCAMP`
.. _SCAMP: http://astromatic.net/software/scamp
.. |SExtractor| replace:: :program:`SExtractor`
.. _SExtractor: http://astromatic.net/software/sextractor
.. |SWarp| replace:: :program:`SWarp`
.. _SWarp: http://astromatic.net/software/swarp
.. |TPV| replace:: ``TPV``
.. _TPV: fits.gsfc.nasa.gov/registry/tpvwcs/tpv.html
.. |TOPCAT| replace:: :program:`TOPCAT`
.. _TOPCAT: http://www.star.bris.ac.uk/~mbt/topcat/
.. |VOTable| replace:: VOTable
.. _VOTable: http://www.ivoa.net/documents/VOTable
.. |WCS| replace:: WCS
.. _WCS: http://www.atnf.csiro.au/people/mcalabre/WCS/index.html
.. |WCSLIB| replace:: :program:`WCSLIB`
.. _WCSLIB: http://www.atnf.csiro.au/people/mcalabre/WCS/wcslib
.. |Windows| replace:: Microsoft Windows\ :sup:`®`\
.. _Windows: http://www.microsoft.com/windows
.. |XML| replace:: :abbr:`XML (eXtensible Markup Language)`
.. _XML: http://en.wikipedia.org/wiki/XML
.. |XSLT| replace:: :abbr:`XSLT (eXtensible Stylesheet Language Transformations)`
.. _XSLT: http://en.wikipedia.org/wiki/XSLT
@ARTICLE{1996A&AS..117..393B,
author = {{Bertin}, E. and {Arnouts}, S.},
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doi = {10.1051/aas:1996164},
adsurl = {http://adsabs.harvard.edu/abs/1996A&AS..117..393B},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@ARTICLE{2002A&A...395.1061G,
author = {{Greisen}, E.~W. and {Calabretta}, M.~R.},
title = "{Representations of world coordinates in FITS}",
journal = {\aap},
eprint = {astro-ph/0207407},
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volume = 395,
pages = {1061-1075},
doi = {10.1051/0004-6361:20021326},
adsurl = {http://adsabs.harvard.edu/abs/2002A&A...395.1061G},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@ARTICLE{2002A&A...395.1077C,
author = {{Calabretta}, M.~R. and {Greisen}, E.~W.},
title = "{Representations of celestial coordinates in FITS}",
journal = {\aap},
eprint = {astro-ph/0207413},
keywords = {methods: data analysis, techniques: image processing, astronomical data bases: miscellaneous, astrometry},
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volume = 395,
pages = {1077-1122},
doi = {10.1051/0004-6361:20021327},
adsurl = {http://adsabs.harvard.edu/abs/2002A&A...395.1077C},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@INPROCEEDINGS{2002ASPC..281..228B,
author = {{Bertin}, E. and {Mellier}, Y. and {Radovich}, M. and {Missonnier}, G. and
{Didelon}, P. and {Morin}, B.},
title = "{The TERAPIX Pipeline}",
keywords = {astronomy: optical, astronomy: software, pipelines: data reduction, software: package, software: development, software: data analysis, data analysis, databases, distributed processing},
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year = 2002,
series = {Astronomical Society of the Pacific Conference Series},
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pages = {228},
adsurl = {http://adsabs.harvard.edu/abs/2002ASPC..281..228B},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@INPROCEEDINGS{2006ASPC..351..112B,
author = {{Bertin}, E.},
title = "{Automatic Astrometric and Photometric Calibration with SCAMP}",
booktitle = {Astronomical Data Analysis Software and Systems XV},
year = 2006,
series = {Astronomical Society of the Pacific Conference Series},
volume = 351,
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month = jul,
pages = {112},
adsurl = {http://adsabs.harvard.edu/abs/2006ASPC..351..112B},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@INPROCEEDINGS{2004ASPC..314..551C,
author = {{Calabretta}, M.~R. and {Valdes}, F. and {Greisen}, E.~W. and
{Allen}, S.~L.},
title = "{Representations of distortions in FITS world coordinate systems}",
booktitle = {Astronomical Data Analysis Software and Systems (ADASS) XIII},
year = 2004,
series = {Astronomical Society of the Pacific Conference Series},
volume = 314,
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month = jul,
pages = {551},
adsurl = {http://adsabs.harvard.edu/abs/2004ASPC..314..551C},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
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