/* * catout.c * * Functions related to catalogue output. * *%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% * * This file part of: SExtractor * * Copyright: (C) 1993-2020 IAP/CNRS/SorbonneU * * License: GNU General Public License * * SExtractor is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * SExtractor is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * You should have received a copy of the GNU General Public License * along with SExtractor. If not, see . * * Last modified: 15/07/2020 * *%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/ #ifdef HAVE_CONFIG_H #include "config.h" #endif #include #include #include #include #include "define.h" #include "globals.h" #include "prefs.h" #include "fits/fitscat.h" #include "param.h" #include "sexhead.h" #include "sexhead1.h" #include "sexheadsc.h" #include "xml.h" objstruct outobj, flagobj; obj2struct outobj2, flagobj2; catstruct *fitscat; tabstruct *objtab = NULL; FILE *ascfile; char *buf; int catopen_flag = 0; double ddummy; int idummy; /******************************* readcatparams *******************************/ /* Read the catalog config file */ void readcatparams(char *filename) { keystruct *key; FILE *infile; char str[MAXCHAR], *keyword, *sstr; int i, size; /* Prepare the OBJECTS tables*/ objtab = new_tab("OBJECTS"); if ((infile = fopen(filename,"r")) == NULL) error(EXIT_FAILURE, "*ERROR*: can't read ", filename); /* Scan the catalog config file*/ thecat.nparam = 0; while (fgets(str, MAXCHAR, infile)) { sstr = str + strspn(str," \t"); if (*sstr!=(char)'#' && *sstr!=(char)'\n') { keyword = strtok(sstr, " \t{[(\n\r"); if (keyword && (i = findkey(keyword,(char *)objkey,sizeof(keystruct)))!=RETURN_ERROR) { key = objkey+i; if (add_key(key, objtab, 0) != RETURN_ERROR) thecat.nparam++; *((char *)key->ptr) = (char)'\1'; if (key->naxis) { for (i=0; inaxis; i++) key->naxisn[i] = 1; size=t_size[key->ttype]; for (i=0; (sstr = strtok(NULL, " \t,;.)]}\r")) && *sstr!=(char)'#' && *sstr!=(char)'\n'; i++) { if (i>=key->naxis) error(EXIT_FAILURE, "*Error*: too many dimensions for keyword ", keyword); if (!(size*=(key->naxisn[i]=atoi(sstr)))) error(EXIT_FAILURE, "*Error*: wrong array syntax for keyword ", keyword); } key->nbytes = size; } } else warning(keyword, " catalog parameter unknown"); } } fclose(infile); /* Now we copy the flags to the proper structures */ flagobj = outobj; flagobj2 = outobj2; /* Differentiate between outobj and outobj2 vectors */ memset(&outobj2, 0, sizeof(outobj2)); updateparamflags(); return; } /******************************* alloccatparams ******************************/ /* Allocate memory for parameter arrays */ void alloccatparams(void) { keystruct *key; int i; /* Go back to multi-dimensional arrays for memory allocation */ if (thecat.nparam) for (i=objtab->nkey, key=objtab->key; i--; key = key->nextkey) if (key->naxis) { /*------ Only outobj2 vectors are dynamic */ if (!*((char **)key->ptr)) { QMALLOC(*((char **)key->ptr), char, key->nbytes); key->ptr = *((char **)key->ptr); key->allocflag = 1; } } return; } /*************************** changecatparamarrays ****************************/ /* Change parameter array dimensions */ void changecatparamarrays(char *keyword, int *axisn, int naxis) { keystruct *key; int d,i, size; if (thecat.nparam) for (i=objtab->nkey, key=objtab->key; i--; key = key->nextkey) if (key->naxis && !strcmp(keyword, key->name)) { size = t_size[key->ttype]; if (key->naxis != naxis) key->naxis = naxis; for (d=0; dnaxisn[d]=axisn[d]); key->nbytes = size; break; } return; } /***************************** updateparamflags ******************************/ /* Update parameter flags according to their mutual dependencies. */ void updateparamflags() { int i; /*----------------------------- Model-fitting -----------------------------*/ prefs.pattern_flag |= FLAG(obj2.prof_disk_patternvector) | FLAG(obj2.prof_disk_patternmodvector) | FLAG(obj2.prof_disk_patternargvector) | FLAG(obj2.prof_disk_patternspiral); FLAG(obj2.prof_disk_scale) |= prefs.pattern_flag; FLAG(obj2.prof_concentration) |= FLAG(obj2.prof_concentrationerr); FLAG(obj2.fluxcorerr_prof) |= FLAG(obj2.magcorerr_prof); FLAG(obj2.fluxcor_prof) |= FLAG(obj2.magcor_prof) | FLAG(obj2.fluxcorerr_prof); FLAG(obj2.poserraw_prof) |= FLAG(obj2.poserrbw_prof); FLAG(obj2.poserrcxxw_prof) |= FLAG(obj2.poserrcyyw_prof) | FLAG(obj2.poserrcxyw_prof); FLAG(obj2.poserrthetas_prof) |= FLAG(obj2.poserrtheta1950_prof) | FLAG(obj2.poserrtheta2000_prof); FLAG(obj2.poserrthetaw_prof) |= FLAG(obj2.poserrthetas_prof); FLAG(obj2.poserrmx2w_prof) |= FLAG(obj2.poserrmy2w_prof) | FLAG(obj2.poserrmxyw_prof) | FLAG(obj2.poserrthetaw_prof)|FLAG(obj2.poserraw_prof) | FLAG(obj2.poserrcxxw_prof); FLAG(obj2.poserra_prof) |= FLAG(obj2.poserrb_prof) | FLAG(obj2.poserrtheta_prof) | FLAG(obj2.poserraw_prof); FLAG(obj2.poserrcxx_prof) |= FLAG(obj2.poserrcyy_prof) | FLAG(obj2.poserrcxy_prof); FLAG(obj2.poserrmx2_prof) |= FLAG(obj2.poserrmy2_prof) | FLAG(obj2.poserrmxy_prof) | FLAG(obj2.poserrmx2w_prof); FLAG(obj2.alpha1950_prof) |= FLAG(obj2.delta1950_prof) | FLAG(obj2.poserrtheta1950_prof); FLAG(obj2.alpha2000_prof) |= FLAG(obj2.delta2000_prof) | FLAG(obj2.alpha1950_prof) | FLAG(obj2.poserrtheta2000_prof); FLAG(obj2.alphas_prof) |= FLAG(obj2.deltas_prof) | FLAG(obj2.alpha2000_prof); FLAG(obj2.xw_prof) |= FLAG(obj2.yw_prof) | FLAG(obj2.alphas_prof); FLAG(obj2.xf_prof) |= FLAG(obj2.yf_prof); FLAG(obj2.x_prof) |= FLAG(obj2.y_prof) | FLAG(obj2.xw_prof) | FLAG(obj2.xf_prof) | FLAG(obj2.poserra_prof) | FLAG(obj2.poserrcxx_prof) | FLAG(obj2.poserrmx2_prof) | FLAG(obj2.prof_concentration) | FLAG(obj2.prof_class_star) | FLAG(obj2.fluxcor_prof); FLAG(obj2.prof_dirac_fluxratio) |= FLAG(obj2.prof_dirac_fluxratioerr); FLAG(obj2.prof_dirac_mag) |= FLAG(obj2.prof_dirac_magerr); FLAG(obj2.prof_spheroid_fluxratio) |= FLAG(obj2.prof_spheroid_fluxratioerr); FLAG(obj2.prof_spheroid_mag) |= FLAG(obj2.prof_spheroid_magerr); FLAG(obj2.prof_spheroid_reff) |= FLAG(obj2.prof_spheroid_refferr); FLAG(obj2.prof_spheroid_aspect) |= FLAG(obj2.prof_spheroid_aspecterr); FLAG(obj2.prof_spheroid_theta) |= FLAG(obj2.prof_spheroid_thetaerr); FLAG(obj2.prof_spheroid_sersicn) |= FLAG(obj2.prof_spheroid_sersicnerr); FLAG(obj2.prof_disk_fluxratio) |= FLAG(obj2.prof_disk_fluxratioerr); FLAG(obj2.prof_disk_mag) |= FLAG(obj2.prof_disk_magerr); FLAG(obj2.prof_disk_scale) |= FLAG(obj2.prof_disk_scaleerr); FLAG(obj2.prof_disk_aspect) |= FLAG(obj2.prof_disk_aspecterr); FLAG(obj2.prof_disk_inclination) |= FLAG(obj2.prof_disk_inclinationerr); FLAG(obj2.prof_disk_theta) |= FLAG(obj2.prof_disk_thetaerr); FLAG(obj2.prof_bar_fluxratio) |= FLAG(obj2.prof_bar_fluxratioerr); FLAG(obj2.prof_bar_mag) |= FLAG(obj2.prof_bar_magerr); FLAG(obj2.prof_bar_length) |= FLAG(obj2.prof_bar_lengtherr); FLAG(obj2.prof_bar_aspect) |= FLAG(obj2.prof_bar_aspecterr); FLAG(obj2.prof_bar_theta) |= FLAG(obj2.prof_bar_thetaerr); FLAG(obj2.prof_arms_fluxratio) |= FLAG(obj2.prof_arms_fluxratioerr); FLAG(obj2.prof_arms_mag) |= FLAG(obj2.prof_arms_magerr); FLAG(obj2.prof_e1errw) |= FLAG(obj2.prof_e2errw) | FLAG(obj2.prof_e12corrw); FLAG(obj2.prof_e1w) |= FLAG(obj2.prof_e2w) | FLAG(obj2.prof_e1errw); FLAG(obj2.prof_pol1errw) |= FLAG(obj2.prof_pol2errw) | FLAG(obj2.prof_pol12corrw); FLAG(obj2.prof_pol1w) |= FLAG(obj2.prof_pol2w) | FLAG(obj2.prof_pol1errw); FLAG(obj2.prof_aw) |= FLAG(obj2.prof_bw); FLAG(obj2.prof_cxxw) |= FLAG(obj2.prof_cyyw) | FLAG(obj2.prof_cxyw); FLAG(obj2.prof_thetas) |= FLAG(obj2.prof_theta1950) | FLAG(obj2.prof_theta2000); FLAG(obj2.prof_thetaw) |= FLAG(obj2.prof_thetas); FLAG(obj2.prof_mx2w) |= FLAG(obj2.prof_my2w) | FLAG(obj2.prof_mxyw) | FLAG(obj2.prof_thetaw) | FLAG(obj2.prof_aw) | FLAG(obj2.prof_cxxw) | FLAG(obj2.prof_e1w) | FLAG(obj2.prof_pol1w); FLAG(obj2.dtheta1950) |= FLAG(obj2.prof_theta1950) | FLAG(obj2.prof_spheroid_theta1950) | FLAG(obj2.prof_disk_theta1950) // | FLAG(obj2.prof_arms_theta1950) | FLAG(obj2.prof_bar_theta1950) | FLAG(obj2.poserrtheta1950_psf) | FLAG(obj2.win_theta1950) | FLAG(obj2.winposerr_theta1950) | FLAG(obj2.poserr_theta1950) | FLAG(obj2.theta1950) | FLAG(obj2.poserrtheta1950_prof); FLAG(obj2.dtheta2000) |= FLAG(obj2.prof_theta2000) | FLAG(obj2.prof_spheroid_theta2000) | FLAG(obj2.prof_disk_theta2000) // | FLAG(obj2.prof_arms_theta2000) | FLAG(obj2.prof_bar_theta2000) | FLAG(obj2.poserrtheta2000_psf) | FLAG(obj2.win_theta2000) | FLAG(obj2.winposerr_theta2000) | FLAG(obj2.poserr_theta2000) | FLAG(obj2.theta2000) | FLAG(obj2.poserrtheta2000_prof); FLAG(obj2.prof_spheroid_thetas) |= FLAG(obj2.prof_spheroid_theta2000) | FLAG(obj2.prof_spheroid_theta1950); FLAG(obj2.prof_spheroid_thetaw) |= FLAG(obj2.prof_spheroid_thetas); FLAG(obj2.prof_disk_thetas) |= FLAG(obj2.prof_disk_theta2000) | FLAG(obj2.prof_disk_theta1950); FLAG(obj2.prof_disk_thetaw) |= FLAG(obj2.prof_disk_thetas); FLAG(obj2.prof_bar_thetas) |= FLAG(obj2.prof_bar_theta2000) | FLAG(obj2.prof_bar_theta1950); FLAG(obj2.prof_bar_thetaw) |= FLAG(obj2.prof_bar_thetas); /* FLAG(obj2.prof_arms_thetaw) |= FLAG(obj2.prof_arms_thetas) | FLAG(obj2.prof_arms_theta2000) | FLAG(obj2.prof_arms_theta1950); */ FLAG(obj2.prof_arms_scalew) |= FLAG(obj2.prof_arms_startw) | FLAG(obj2.prof_arms_scaleerrw) | FLAG(obj2.prof_arms_starterrw); FLAG(obj2.prof_bar_lengthw) |= FLAG(obj2.prof_bar_aspectw) | FLAG(obj2.prof_bar_thetaw) | FLAG(obj2.prof_bar_lengtherrw) | FLAG(obj2.prof_bar_aspecterrw) | FLAG(obj2.prof_bar_thetaerrw); FLAG(obj2.prof_disk_scalew) |= FLAG(obj2.prof_disk_aspectw) | FLAG(obj2.prof_disk_thetaw) | FLAG(obj2.prof_disk_scaleerrw) | FLAG(obj2.prof_disk_aspecterrw) | FLAG(obj2.prof_disk_thetaerrw) | FLAG(obj2.prof_arms_scalew); FLAG(obj2.prof_disk_fluxmean) |= FLAG(obj2.prof_disk_mumean); FLAG(obj2.prof_disk_fluxeff) |= FLAG(obj2.prof_disk_mueff); FLAG(obj2.prof_disk_peak) |= FLAG(obj2.prof_disk_mumax) | FLAG(obj2.prof_disk_fluxeff) | FLAG(obj2.prof_disk_fluxmean); FLAG(obj2.prof_spheroid_reffw) |= FLAG(obj2.prof_spheroid_aspectw) | FLAG(obj2.prof_spheroid_thetaw) | FLAG(obj2.prof_spheroid_refferrw) | FLAG(obj2.prof_spheroid_aspecterrw) | FLAG(obj2.prof_spheroid_thetaerrw); FLAG(obj2.prof_spheroid_fluxmean) |= FLAG(obj2.prof_spheroid_mumean); FLAG(obj2.prof_spheroid_fluxeff) |= FLAG(obj2.prof_spheroid_mueff); FLAG(obj2.prof_spheroid_peak) |= FLAG(obj2.prof_spheroid_mumax) | FLAG(obj2.prof_spheroid_fluxeff) | FLAG(obj2.prof_spheroid_fluxmean); FLAG(obj2.prof_flagw) |= FLAG(obj2.prof_spheroid_reffw) | FLAG(obj2.prof_disk_scalew) | FLAG(obj2.prof_bar_lengthw) | FLAG(obj2.prof_arms_scalew) | FLAG(obj2.prof_mx2w); FLAG(obj2.prof_e1err) |= FLAG(obj2.prof_e2err) | FLAG(obj2.prof_e12corr) | FLAG(obj2.prof_e1errw); FLAG(obj2.prof_e1) |= FLAG(obj2.prof_e2) | FLAG(obj2.prof_e1err) | FLAG(obj2.prof_e1w); FLAG(obj2.prof_pol1err) |= FLAG(obj2.prof_pol2err) | FLAG(obj2.prof_pol12corr) | FLAG(obj2.prof_pol1errw); FLAG(obj2.prof_pol1) |= FLAG(obj2.prof_pol2) | FLAG(obj2.prof_pol1err) | FLAG(obj2.prof_pol1w); FLAG(obj2.prof_a) |= FLAG(obj2.prof_b) | FLAG(obj2.prof_theta) | FLAG(obj2.prof_aw); FLAG(obj2.prof_cxx) |= FLAG(obj2.prof_cyy) | FLAG(obj2.prof_cxy) | FLAG(obj2.prof_cxxw); FLAG(obj2.prof_mx2) |= FLAG(obj2.prof_my2) | FLAG(obj2.prof_mxy) | FLAG(obj2.prof_e1) | FLAG(obj2.prof_pol1) | FLAG(obj2.prof_a) | FLAG(obj2.prof_cxx) | FLAG(obj2.prof_mx2w); FLAG(obj2.prof_conva) |= FLAG(obj2.prof_convb) | FLAG(obj2.prof_convtheta); FLAG(obj2.prof_convcxx) |= FLAG(obj2.prof_convcyy) /*| FLAG(obj2.fluxcor_prof) */; FLAG(obj2.prof_convmx2) |= FLAG(obj2.prof_convcxx) | FLAG(obj2.prof_conva); FLAG(obj2.fluxmean_prof) |= FLAG(obj2.mumean_prof); FLAG(obj2.peak_prof) |= FLAG(obj2.mumax_prof); FLAG(obj2.fluxeff_prof) |= FLAG(obj2.mueff_prof) | FLAG(obj2.fluxmean_prof) | FLAG(obj2.peak_prof); FLAG(obj2.prof_arms_flux) |= FLAG(obj2.prof_arms_fluxerr) | FLAG(obj2.prof_arms_mag) | FLAG(obj2.prof_arms_fluxratio) | FLAG(obj2.prof_arms_scalew) | FLAG(obj2.prof_arms_scale) | FLAG(obj2.prof_arms_posang) | FLAG(obj2.prof_arms_pitch) | FLAG(obj2.prof_arms_start) | FLAG(obj2.prof_arms_quadfrac); FLAG(obj2.prof_bar_theta) |= FLAG(obj2.prof_bar_lengthw); FLAG(obj2.prof_bar_flux) |= FLAG(obj2.prof_bar_fluxerr) | FLAG(obj2.prof_bar_mag) | FLAG(obj2.prof_bar_fluxratio) | FLAG(obj2.prof_bar_lengthw) | FLAG(obj2.prof_bar_length) | FLAG(obj2.prof_bar_aspect) | FLAG(obj2.prof_bar_posang) | FLAG(obj2.prof_bar_theta) | FLAG(obj2.prof_arms_flux); FLAG(obj2.prof_disk_flux) |= FLAG(obj2.prof_disk_fluxerr) | FLAG(obj2.prof_disk_mag) | FLAG(obj2.prof_disk_fluxratio) | FLAG(obj2.prof_disk_scalew) | FLAG(obj2.prof_disk_scale) | FLAG(obj2.prof_disk_aspect) | FLAG(obj2.prof_disk_inclination) | FLAG(obj2.prof_disk_theta) | FLAG(obj2.prof_disk_peak) | FLAG(obj2.prof_bar_flux); FLAG(obj2.prof_spheroid_flux) |= FLAG(obj2.prof_spheroid_fluxerr) | FLAG(obj2.prof_spheroid_mag) | FLAG(obj2.prof_spheroid_fluxratio) | FLAG(obj2.prof_spheroid_reffw) | FLAG(obj2.prof_spheroid_reff) | FLAG(obj2.prof_spheroid_aspect) | FLAG(obj2.prof_spheroid_theta) | FLAG(obj2.prof_spheroid_sersicn) | FLAG(obj2.prof_spheroid_peak); FLAG(obj2.prof_dirac_flux) |= FLAG(obj2.prof_dirac_fluxerr) | FLAG(obj2.prof_dirac_mag) | FLAG(obj2.prof_dirac_fluxratio); FLAG(obj2.prof_offset_flux) |= FLAG(obj2.prof_offset_fluxerr); FLAG(obj2.fluxerr_dprof) |= FLAG(obj2.magerr_dprof); FLAG(obj2.flux_dprof) |= FLAG(obj2.mag_dprof) | FLAG(obj2.fluxerr_dprof); prefs.dprof_flag |= FLAG(obj2.dprof_chi2) | FLAG(obj2.dprof_flag) | FLAG(obj2.dprof_niter) | FLAG(obj2.flux_dprof); FLAG(obj2.fluxerr_prof) |= FLAG(obj2.magerr_prof) | FLAG(obj2.prof_concentrationerr) | FLAG(obj2.fluxcorerr_prof) | FLAG(obj2.prof_arms_fluxratio) | FLAG(obj2.prof_bar_fluxratio) | FLAG(obj2.prof_disk_fluxratio) | FLAG(obj2.prof_spheroid_fluxratio) | FLAG(obj2.prof_dirac_fluxratio); FLAG(obj2.flux_prof) |= FLAG(obj2.mag_prof) | FLAG(obj2.fluxerr_prof) | FLAG(obj2.fluxcor_prof); prefs.prof_flag |= FLAG(obj2.prof_chi2) | FLAG(obj2.prof_niter) | FLAG(obj2.prof_vector) | FLAG(obj2.prof_errvector) | FLAG(obj2.prof_errmatrix) | FLAG(obj2.x_prof) | FLAG(obj2.y_prof) | FLAG(obj2.prof_flag) | FLAG(obj2.flux_prof) | FLAG(obj2.prof_mx2) | FLAG(obj2.fluxeff_prof) | FLAG(obj2.prof_disk_flux) | FLAG(obj2.prof_spheroid_flux) | FLAG(obj2.prof_dirac_flux) | FLAG(obj2.prof_offset_flux) | prefs.dprof_flag; /* If only global parameters are requested, fit a Sersic model */ if (prefs.prof_flag && !(FLAG(obj2.prof_spheroid_flux) | FLAG(obj2.prof_disk_flux) | FLAG(obj2.prof_dirac_flux) | FLAG(obj2.prof_offset_flux))) { FLAG(obj2.prof_spheroid_flux) |= prefs.prof_flag; FLAG(obj2.prof_spheroid_sersicn) |= prefs.prof_flag; } /*------------------------------ Astrometry ---------------------------------*/ FLAG(obj2.win_aw) |= FLAG(obj2.win_bw) | FLAG(obj2.win_polarw); FLAG(obj2.win_cxxw) |= FLAG(obj2.win_cyyw) | FLAG(obj2.win_cxyw); FLAG(obj2.win_thetas) |= FLAG(obj2.win_theta1950) | FLAG(obj2.win_theta2000); FLAG(obj2.win_thetaw) |= FLAG(obj2.win_thetas); FLAG(obj2.win_mx2w) |= FLAG(obj2.win_my2w) | FLAG(obj2.win_mxyw) | FLAG(obj2.win_thetaw) | FLAG(obj2.win_aw) | FLAG(obj2.win_cxxw); FLAG(obj2.win_a) |= FLAG(obj2.win_b) | FLAG(obj2.win_theta) | FLAG(obj2.win_polar) | FLAG(obj2.win_aw); FLAG(obj2.win_cxx) |= FLAG(obj2.win_cyy) | FLAG(obj2.win_cxy) | FLAG(obj2.win_cxxw); FLAG(obj2.win_mx2) |= FLAG(obj2.win_my2) | FLAG(obj2.win_mxy) | FLAG(obj2.win_a) | FLAG(obj2.win_cxx) | FLAG(obj2.win_mx2w); FLAG(obj2.winposerr_aw) |= FLAG(obj2.winposerr_bw); FLAG(obj2.winposerr_cxxw) |= FLAG(obj2.winposerr_cyyw) | FLAG(obj2.winposerr_cxyw); FLAG(obj2.winposerr_thetas) |= FLAG(obj2.winposerr_theta1950) | FLAG(obj2.winposerr_theta2000); FLAG(obj2.winposerr_thetaw) |= FLAG(obj2.winposerr_thetas); FLAG(obj2.winposerr_mx2w) |= FLAG(obj2.winposerr_my2w) | FLAG(obj2.winposerr_mxyw) | FLAG(obj2.winposerr_thetaw) | FLAG(obj2.winposerr_aw) | FLAG(obj2.winposerr_cxxw); FLAG(obj2.winposerr_a) |= FLAG(obj2.winposerr_b) | FLAG(obj2.winposerr_theta); FLAG(obj2.winposerr_cxx) |= FLAG(obj2.winposerr_cyy) | FLAG(obj2.winposerr_cxy); FLAG(obj2.winposerr_mx2) |= FLAG(obj2.winposerr_my2) | FLAG(obj2.winposerr_mxy) | FLAG(obj2.winposerr_a) | FLAG(obj2.winposerr_cxx) | FLAG(obj2.winposerr_mx2w); FLAG(obj2.winpos_alpha1950) |= FLAG(obj2.winpos_delta1950) | FLAG(obj2.win_theta1950) | FLAG(obj2.winposerr_theta1950); FLAG(obj2.winpos_alpha2000) |= FLAG(obj2.winpos_delta2000) | FLAG(obj2.winpos_alpha1950) | FLAG(obj2.win_theta2000) | FLAG(obj2.winposerr_theta2000); FLAG(obj2.winpos_alphas) |= FLAG(obj2.winpos_deltas) | FLAG(obj2.winpos_alpha2000); FLAG(obj2.winpos_xf) |= FLAG(obj2.winpos_yf); FLAG(obj2.winpos_xw) |= FLAG(obj2.winpos_yw) | FLAG(obj2.winpos_alphas); FLAG(obj2.poserr_aw) |= FLAG(obj2.poserr_bw); FLAG(obj2.poserr_cxxw) |= FLAG(obj2.poserr_cyyw) | FLAG(obj2.poserr_cxyw); FLAG(obj2.poserr_thetas) |= FLAG(obj2.poserr_theta1950) | FLAG(obj2.poserr_theta2000); FLAG(obj2.poserr_thetaw) |= FLAG(obj2.poserr_thetas); FLAG(obj2.poserr_mx2w) |= FLAG(obj2.poserr_my2w) | FLAG(obj2.poserr_mxyw) | FLAG(obj2.poserr_thetaw) | FLAG(obj2.poserr_aw) | FLAG(obj2.poserr_cxxw); FLAG(obj2.poserr_a) |= FLAG(obj2.poserr_b) | FLAG(obj2.poserr_theta) | FLAG(obj2.winposerr_a); FLAG(obj2.poserr_cxx) |= FLAG(obj2.poserr_cyy) | FLAG(obj2.poserr_cxy); FLAG(obj.poserr_mx2) |= FLAG(obj.poserr_my2) | FLAG(obj.poserr_mxy) | FLAG(obj2.poserr_a) | FLAG(obj2.poserr_cxx) | FLAG(obj2.poserr_mx2w) | FLAG(obj2.winposerr_mx2); FLAG(obj2.peakalpha1950) |= FLAG(obj2.peakdelta1950); FLAG(obj2.alpha1950) |= FLAG(obj2.delta1950) | FLAG(obj2.theta1950) | FLAG(obj2.poserr_theta1950) | FLAG(obj2.dtheta1950); ; FLAG(obj2.peakalpha2000) |= FLAG(obj2.peakdelta2000) | FLAG(obj2.peakalpha1950); FLAG(obj2.alpha2000) |= FLAG(obj2.delta2000) | FLAG(obj2.alpha1950) | FLAG(obj2.dtheta2000); FLAG(obj2.peakalphas) |= FLAG(obj2.peakdeltas) | FLAG(obj2.peakalpha2000); FLAG(obj2.alphas) |= FLAG(obj2.deltas) | FLAG(obj2.alpha2000); FLAG(obj2.thetas) |= FLAG(obj2.theta1950) | FLAG(obj2.theta2000); FLAG(obj2.thetaw) |= FLAG(obj2.thetas); FLAG(obj2.aw) |= FLAG(obj2.bw) | FLAG(obj2.polarw); FLAG(obj2.cxxw) |= FLAG(obj2.cyyw) | FLAG(obj2.cxyw); FLAG(obj2.mx2w) |= FLAG(obj2.my2w) | FLAG(obj2.mxyw) | FLAG(obj2.thetaw) | FLAG(obj2.aw) | FLAG(obj2.cxxw); FLAG(obj2.peakxw) |= FLAG(obj2.peakyf); FLAG(obj2.peakxw) |= FLAG(obj2.peakyw) | FLAG(obj2.peakalphas); FLAG(obj.peakx) |= FLAG(obj.peaky) | FLAG(obj2.peakxw) | FLAG(obj2.peakxf); FLAG(obj2.mxf) |= FLAG(obj2.myf); FLAG(obj2.mxw) |= FLAG(obj2.myw) | FLAG(obj2.mx2w) | FLAG(obj2.alphas) | FLAG(obj2.poserr_mx2w) | ((FLAG(obj2.assoc) | FLAG(obj2.assoc_number)) && (prefs.assoccoord_type==ASSOCCOORD_WORLD)); FLAG(obj2.mamaposx) |= FLAG(obj2.mamaposy); FLAG(obj2.fluxerr_win) |= FLAG(obj2.snr_win); FLAG(obj2.flux_win) |= FLAG(obj2.mag_win)|FLAG(obj2.magerr_win) | FLAG(obj2.flux_win) | FLAG(obj2.fluxerr_win); FLAG(obj2.winpos_dgeox) |= FLAG(obj2.winpos_dgeoy); FLAG(obj2.winpos_x) |= FLAG(obj2.winpos_y) | FLAG(obj2.winpos_dgeox) | FLAG(obj2.winposerr_mx2) | FLAG(obj2.win_mx2) | FLAG(obj2.winpos_xw) | FLAG(obj2.winpos_xf) | FLAG(obj2.win_flag) | FLAG(obj2.flux_win) |FLAG(obj2.winpos_niter); FLAG(obj2.area_flagw) |= FLAG(obj2.npixw) | FLAG(obj2.fdnpixw) | FLAG(obj2.fwhmw) | FLAG(obj2.maxmu) | FLAG(obj2.threshmu) | FLAG(obj2.prof_spheroid_mumax) | FLAG(obj2.prof_disk_mumax) | FLAG(obj2.mumax_prof); /*------------------------------ Photometry ---------------------------------*/ FLAG(obj2.fluxerr_best) |= FLAG(obj2.magerr_best); FLAG(obj2.flux_best) |= FLAG(obj2.mag_best) | FLAG(obj2.fluxerr_best); FLAG(obj2.hl_radius) |= FLAG(obj2.winpos_x) | prefs.prof_flag; FLAG(obj2.flux_auto) |= FLAG(obj2.mag_auto) | FLAG(obj2.magerr_auto) | FLAG(obj2.fluxerr_auto) | FLAG(obj2.kronfactor) | FLAG(obj2.flux_best) | FLAG(obj2.flux_radius) | FLAG(obj2.hl_radius) | FLAG(obj2.fluxcor_prof); FLAG(obj2.flux_petro) |= FLAG(obj2.mag_petro) | FLAG(obj2.magerr_petro) | FLAG(obj2.fluxerr_petro) | FLAG(obj2.petrofactor); FLAG(obj2.fluxerr_isocor) |= FLAG(obj2.magerr_isocor) | FLAG(obj2.fluxerr_best); FLAG(obj2.flux_isocor) |= FLAG(obj2.mag_isocor) | FLAG(obj2.fluxerr_isocor) | FLAG(obj2.flux_best); FLAG(obj2.flux_aper) |= FLAG(obj2.mag_aper)|FLAG(obj2.magerr_aper) | FLAG(obj2.fluxerr_aper); FLAG(obj2.flux_galfit) |= FLAG(obj2.mag_galfit) | FLAG(obj2.magerr_galfit) | FLAG(obj2.fluxerr_galfit); /*---------------------------- External flags -------------------------------*/ VECFLAG(obj.imaflag) |= VECFLAG(obj.imanflag); /*------------------------------ PSF-fitting --------------------------------*/ FLAG(obj2.fwhm_psf) |= FLAG(obj2.fwhmw_psf); FLAG(obj2.poserraw_psf) |= FLAG(obj2.poserrbw_psf); FLAG(obj2.poserrcxxw_psf) |= FLAG(obj2.poserrcyyw_psf) | FLAG(obj2.poserrcxyw_psf); FLAG(obj2.poserrthetas_psf) |= FLAG(obj2.poserrtheta1950_psf) | FLAG(obj2.poserrtheta2000_psf); FLAG(obj2.poserrthetaw_psf) |= FLAG(obj2.poserrthetas_psf); FLAG(obj2.poserrmx2w_psf) |= FLAG(obj2.poserrmy2w_psf) | FLAG(obj2.poserrmxyw_psf) | FLAG(obj2.poserrthetaw_psf) | FLAG(obj2.poserraw_psf) | FLAG(obj2.poserrcxxw_psf); FLAG(obj2.poserra_psf) |= FLAG(obj2.poserrb_psf) | FLAG(obj2.poserrtheta_psf); FLAG(obj2.poserrcxx_psf) |= FLAG(obj2.poserrcyy_psf) | FLAG(obj2.poserrcxy_psf); FLAG(obj2.poserrmx2_psf) |= FLAG(obj2.poserrmy2_psf) | FLAG(obj2.poserrmxy_psf) | FLAG(obj2.poserra_psf) | FLAG(obj2.poserrcxx_psf) | FLAG(obj2.poserrmx2w_psf); FLAG(obj2.alpha1950_psf) |= FLAG(obj2.delta1950_psf) | FLAG(obj2.poserrtheta1950_psf); FLAG(obj2.alpha2000_psf) |= FLAG(obj2.delta2000_psf) | FLAG(obj2.alpha1950_psf) | FLAG(obj2.poserrtheta2000_psf); FLAG(obj2.alphas_psf) |= FLAG(obj2.deltas_psf) | FLAG(obj2.alpha2000_psf); FLAG(obj2.xw_psf) |= FLAG(obj2.yw_psf) | FLAG(obj2.poserrmx2w_psf) | FLAG(obj2.alphas_psf); FLAG(obj2.fluxerr_psf) |= FLAG(obj2.poserrmx2_psf) | FLAG(obj2.magerr_psf); FLAG(obj2.mx2_pc) |= FLAG(obj2.my2_pc) | FLAG(obj2.mxy_pc) | FLAG(obj2.a_pc) | FLAG(obj2.b_pc) | FLAG(obj2.theta_pc) | FLAG(obj2.vector_pc) | FLAG(obj2.gdposang) | FLAG(obj2.gdscale) | FLAG(obj2.gdaspect) | FLAG(obj2.flux_galfit) | FLAG(obj2.gde1) | FLAG(obj2.gde2) | FLAG(obj2.gbposang) | FLAG(obj2.gbscale) | FLAG(obj2.gbaspect) | FLAG(obj2.gbratio); FLAG(obj2.flux_psf) |= FLAG(obj2.mag_psf) | FLAG(obj2.x_psf) | FLAG(obj2.y_psf) | FLAG(obj2.xw_psf) | FLAG(obj2.fluxerr_psf) | FLAG(obj2.niter_psf) | FLAG(obj2.chi2_psf) | FLAG(obj2.mx2_pc); /*-------------------------------- Others -----------------------------------*/ FLAG(obj.fwhm) |= FLAG(obj2.fwhmw); FLAG(obj.iso[0]) |= FLAG(obj2.sprob); for (i=0; ikey)) for (i=0,n=1; i++nkey; key=key->nextkey) { if (*key->unit) fprintf(ascfile, "# %3d %-22.22s %-58.58s [%s]\n", n, key->name,key->comment, key->unit); else fprintf(ascfile, "# %3d %-22.22s %-58.58s\n", n, key->name,key->comment); n += key->nbytes/t_size[key->ttype]; } else if (prefs.cat_type == ASCII_SKYCAT && (key = objtab->key)) { if (objtab->nkey<3) error(EXIT_FAILURE,"The SkyCat format requires at least 4 parameters:", " Id Ra Dec Mag"); /*--- We add a tab between rows, as required by Skycat */ fprintf(ascfile, skycathead, 8.0); for (i=1,key=key->nextkey; i++nkey; key=key->nextkey) { if (i>4) fprintf(ascfile, "\t%s", key->name); sprintf(gstr, "\t%s", key->printf); strcpy(key->printf, gstr); } fprintf(ascfile, "\n------------------\n"); } else if (prefs.cat_type == ASCII_VO && objtab->key) { write_xml_header(ascfile); write_vo_fields(ascfile); fprintf(ascfile, " \n"); } } else { fitscat = new_cat(1); init_cat(fitscat); strcpy(fitscat->filename, prefs.cat_name); if (open_cat(fitscat, WRITE_ONLY) != RETURN_OK) error(EXIT_FAILURE,"*Error*: cannot open for writing ",prefs.cat_name); switch(prefs.cat_type) { case FITS_LDAC: case FITS_TPX: /*------ Save a "pure" primary HDU */ save_tab(fitscat, fitscat->tab); break; case FITS_10: /*------ Add to the primary HDU extraction parameters */ key = headkey1; while (*key->name) addkeyto_head(fitscat->tab, key++); save_tab(fitscat, fitscat->tab); break; default: error (EXIT_FAILURE, "*Internal Error*: Unknown FITS type in ", "initcat()"); } } catopen_flag = 1; return; } /****** write_vo_fields ******************************************************* PROTO int write_vo_fields(FILE *file) PURPOSE Write the list of columns to an XML-VOTable file or stream INPUT Pointer to the output file (or stream). OUTPUT -. NOTES -. AUTHOR E. Bertin (IAP) VERSION 14/07/2006 ***/ void write_vo_fields(FILE *file) { keystruct *key; char datatype[40], arraysize[40], str[40]; int i, d; if (!objtab || !objtab->key) return; key=objtab->key; for (i=0; i++nkey; key=key->nextkey) { /*--- indicate datatype, arraysize, width and precision attributes */ /*--- Handle multidimensional arrays */ arraysize[0] = '\0'; if (key->naxis>1) { for (d=0; dnaxis; d++) { sprintf(str, "%s%d", d?"x":" arraysize=\"", key->naxisn[d]); strcat(arraysize, str); } strcat(arraysize, "\""); } switch(key->ttype) { case T_BYTE: strcpy(datatype, "unsignedByte"); break; case T_SHORT: strcpy(datatype, "short"); break; case T_LONG: strcpy(datatype, "int"); break; case T_FLOAT: strcpy(datatype, "float"); break; case T_DOUBLE: strcpy(datatype, "double"); break; default: error(EXIT_FAILURE, "*Internal Error*: Unknown datatype in ", "initcat()"); } fprintf(file, " \n", key->name, key->voucd, datatype,key->vounit, arraysize); fprintf(file, " %s\n", key->comment); fprintf(file, " \n"); } return; } /********************************* reinitcat *********************************/ /* Initialize the catalog header */ void reinitcat(picstruct *field) { tabstruct *tab, *asctab; keystruct *key; if (prefs.cat_type == CAT_NONE) return; if (prefs.cat_type != ASCII_HEAD && prefs.cat_type != ASCII && prefs.cat_type != ASCII_SKYCAT && prefs.cat_type != ASCII_VO) { update_tab(objtab); switch(prefs.cat_type) { case FITS_LDAC: /*------ We create a dummy table (only used through its header) */ QCALLOC(asctab, tabstruct, 1); asctab->headnblock = field->tab->headnblock; QMEMCPY(field->tab->headbuf, asctab->headbuf, char, asctab->headnblock*FBSIZE); key = headkey; while (*key->name) addkeyto_head(asctab, key++); tab = new_tab("LDAC_IMHEAD"); add_tab(tab, fitscat, 0); key = new_key("Field Header Card"); key->ptr = asctab->headbuf; asctab->headbuf = NULL; free_tab(asctab); key->htype = H_STRING; key->ttype = T_STRING; key->nobj = 1; key->nbytes = 80*(fitsfind(key->ptr, "END ")+1); key->naxis = 2; QMALLOC(key->naxisn, int, key->naxis); key->naxisn[0] = 80; key->naxisn[1] = key->nbytes/80; add_key(key, tab, 0); save_tab(fitscat, tab); strcpy(objtab->extname, "LDAC_OBJECTS"); break; case FITS_TPX: /*------ We create a dummy table (only used through its header) */ QCALLOC(asctab, tabstruct, 1); asctab->headnblock = field->tab->headnblock; QMEMCPY(field->tab->headbuf, asctab->headbuf, char, asctab->headnblock*FBSIZE); key = headkey; while (*key->name) addkeyto_head(asctab, key++); tab = new_tab("TPX_IMHEAD"); add_tab(tab, fitscat, 0); key = new_key("Field Header Card"); key->ptr = asctab->headbuf; asctab->headbuf = NULL; free_tab(asctab); key->htype = H_STRING; key->ttype = T_STRING; key->nobj = fitsfind(key->ptr, "END ")+1; key->nbytes = 80; key->naxis = 1; QMALLOC(key->naxisn, int, key->naxis); key->naxisn[0] = 80; add_key(key, tab, 0); save_tab(fitscat, tab); strcpy(objtab->extname, "TPX_OBJECTS"); break; case FITS_10: /*------ Add to the primary HDU extraction parameters */ /* key = headkey1; while (*key->name) addkeyto_head(fitscat->tab, key++); save_tab(fitscat, fitscat->tab); */ break; default: error (EXIT_FAILURE, "*Internal Error*: Unknown FITS type in ", "reinitcat()"); } objtab->cat = fitscat; init_writeobj(fitscat, objtab, &buf); } zerocat(); return; } /********************************* writecat **********************************/ /* Write out in the catalog each one object. */ void writecat(int n, objliststruct *objlist) { outobj = objlist->obj[n]; switch(prefs.cat_type) { case FITS_10: case FITS_LDAC: case FITS_TPX: write_obj(objtab, buf); break; case ASCII: case ASCII_HEAD: case ASCII_SKYCAT: print_obj(ascfile, objtab); break; case ASCII_VO: voprint_obj(ascfile, objtab); break; case CAT_NONE: break; default: error (EXIT_FAILURE, "*Internal Error*: Unknown catalog type", ""); } return; } /********************************** endcat ***********************************/ /* Terminate the catalog output. */ void endcat(char *error) { keystruct *key; int i; if (!catopen_flag) { if (prefs.cat_type == ASCII_VO) write_xmlerror(prefs.cat_name, error); return; } switch(prefs.cat_type) { case ASCII: case ASCII_HEAD: if (!prefs.pipe_flag) fclose(ascfile); break; case ASCII_SKYCAT: fprintf(ascfile, skycattail); if (!prefs.pipe_flag) fclose(ascfile); break; case ASCII_VO: fprintf(ascfile, " \n"); fprintf(ascfile, " \n"); /*---- Add configuration file meta-data */ write_xml_meta(ascfile, error); fprintf(ascfile, "\n"); fprintf(ascfile, "\n"); if (!prefs.pipe_flag) fclose(ascfile); break; case FITS_LDAC: case FITS_TPX: case FITS_10: free_cat(&fitscat,1); break; case CAT_NONE: break; default: break; } /* Free allocated memory for arrays */ key = objtab->key; for (i=objtab->nkey; i--; key=key->nextkey) if (key->naxis && key->allocflag) free(key->ptr); objtab->key = NULL; objtab->nkey = 0; free_tab(objtab); objtab = NULL; return; } /******************************** reendcat ***********************************/ /* Terminate the catalog output. */ void reendcat() { keystruct *key; tabstruct *tab; OFF_T2 pos; char *head; switch(prefs.cat_type) { case ASCII: case ASCII_HEAD: case ASCII_SKYCAT: case ASCII_VO: break; case FITS_LDAC: case FITS_TPX: end_writeobj(fitscat, objtab, buf); key = NULL; if (!(tab=fitscat->tab->prevtab) || !(key=name_to_key(tab, "Field Header Card"))) error(EXIT_FAILURE,"*Error*: cannot update table ", "ASCFIELD"); head = key->ptr; fitswrite(head, "SEXNDET ", &thecat.ndetect,H_INT,T_LONG); fitswrite(head, "SEXNFIN ", &thecat.ntotal, H_INT,T_LONG); fitswrite(head, "SEXDATE ", thecat.ext_date, H_STRING, T_STRING); fitswrite(head, "SEXTIME ", thecat.ext_time, H_STRING, T_STRING); fitswrite(head, "SEXELAPS", &thecat.ext_elapsed, H_FLOAT, T_DOUBLE); QFTELL(fitscat->file, pos, fitscat->filename); QFSEEK(fitscat->file, tab->headpos, SEEK_SET, fitscat->filename); save_tab(fitscat, tab); remove_tab(fitscat, "LDAC_IMHEAD", 0); QFSEEK(fitscat->file, pos, SEEK_SET, fitscat->filename); break; case FITS_10: end_writeobj(fitscat, objtab, buf); fitswrite(fitscat->tab->headbuf,"SEXNDET ",&thecat.ndetect,H_INT,T_LONG); fitswrite(fitscat->tab->headbuf,"SEXNFIN ",&thecat.ntotal, H_INT,T_LONG); QFTELL(fitscat->file, pos, fitscat->filename); QFSEEK(fitscat->file, fitscat->tab->headpos, SEEK_SET,fitscat->filename); save_tab(fitscat, fitscat->tab); QFSEEK(fitscat->file, pos, SEEK_SET, fitscat->filename); break; case CAT_NONE: break; default: break; } return; } /********************************** zerocat **********************************/ /* Reset to 0 all measurements in the current catalog. */ void zerocat(void) { keystruct *key; int i; key = objtab->key; for (i=objtab->nkey; i--; key=key->nextkey) memset(key->ptr, 0, key->nbytes); return; }