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Commit 33dff68d authored by Yan Zhaojun's avatar Yan Zhaojun
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update

parent 7f51aaa2
Pipeline #7593 failed with stage
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csst_ifs_sim/csst_ifs_sim.py
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...@@ -138,7 +138,7 @@ class CDM03bidir(): ...@@ -138,7 +138,7 @@ class CDM03bidir():
# read in trap information # read in trap information
trapdata = np.loadtxt( trapdata = np.loadtxt(
os.path.join(self.values['dir_path'],self.values['paralleltrapfile'])) os.path.join(self.values['dir_path'], self.values['paralleltrapfile']))
if trapdata.ndim > 1: if trapdata.ndim > 1:
self.nt_p = trapdata[:, 0] self.nt_p = trapdata[:, 0]
self.sigma_p = trapdata[:, 1] self.sigma_p = trapdata[:, 1]
...@@ -150,7 +150,7 @@ class CDM03bidir(): ...@@ -150,7 +150,7 @@ class CDM03bidir():
self.taur_p = [trapdata[2],] self.taur_p = [trapdata[2],]
trapdata = np.loadtxt( trapdata = np.loadtxt(
os.path.join(self.values['dir_path'],self.values['serialtrapfile'])) os.path.join(self.values['dir_path'], self.values['serialtrapfile']))
if trapdata.ndim > 1: if trapdata.ndim > 1:
self.nt_s = trapdata[:, 0] self.nt_s = trapdata[:, 0]
self.sigma_s = trapdata[:, 1] self.sigma_s = trapdata[:, 1]
...@@ -260,15 +260,7 @@ class CDM03bidir(): ...@@ -260,15 +260,7 @@ class CDM03bidir():
return np.asanyarray(CTIed) return np.asanyarray(CTIed)
#################################################################################################################
#################################################################################################################
"""
These functions can be used for logging information.
.. Warning:: logger is not multiprocessing safe.
:version: 0.3
"""
def lg(log_filename, loggername='logger'): def lg(log_filename, loggername='logger'):
""" """
Sets up a logger. Sets up a logger.
...@@ -297,7 +289,7 @@ def lg(log_filename, loggername='logger'): ...@@ -297,7 +289,7 @@ def lg(log_filename, loggername='logger'):
logger.addHandler(handler) logger.addHandler(handler)
return logger return logger
##############################################################################
def IFSinformation(): def IFSinformation():
""" """
...@@ -651,7 +643,7 @@ def ill2flux(path, E): ...@@ -651,7 +643,7 @@ def ill2flux(path, E):
""" """
# use template from sky_bkg (background_spec_hst.dat) # use template from sky_bkg (background_spec_hst.dat)
filename = os.path.join(path,'IFS_inputdata/refs/background_spec_hst.dat') filename = os.path.join(path, 'IFS_inputdata/refs/background_spec_hst.dat')
cat_spec = pd.read_csv(filename, sep='\\s+', header=None, comment='#') cat_spec = pd.read_csv(filename, sep='\\s+', header=None, comment='#')
wave0 = cat_spec[0].values # A wave0 = cat_spec[0].values # A
spec0 = cat_spec[2].values # erg/s/cm^2/A/arcsec^2 spec0 = cat_spec[2].values # erg/s/cm^2/A/arcsec^2
...@@ -745,7 +737,7 @@ class StrayLight(object): ...@@ -745,7 +737,7 @@ class StrayLight(object):
self.ecliptic = self.equator.transform_to('barycentrictrueecliptic') self.ecliptic = self.equator.transform_to('barycentrictrueecliptic')
self.pointing = transRaDec2D(radec[0], radec[1]) self.pointing = transRaDec2D(radec[0], radec[1])
self.slcdll = ctypes.CDLL( self.slcdll = ctypes.CDLL(
os.path.join(self.path,'IFS_inputdata/refs/libstraylight.so')) # dylib os.path.join(self.path, 'IFS_inputdata/refs/libstraylight.so')) # dylib
self.slcdll.Calculate.argtypes = [ctypes.c_double, ctypes.POINTER(ctypes.c_double), self.slcdll.Calculate.argtypes = [ctypes.c_double, ctypes.POINTER(ctypes.c_double),
ctypes.POINTER(ctypes.c_double), ctypes.POINTER( ctypes.POINTER(ctypes.c_double), ctypes.POINTER(
...@@ -768,11 +760,12 @@ class StrayLight(object): ...@@ -768,11 +760,12 @@ class StrayLight(object):
ctypes.POINTER(ctypes.c_double)] ctypes.POINTER(ctypes.c_double)]
self.slcdll.Init.argtypes = [ self.slcdll.Init.argtypes = [
ctypes.c_char_p, ctypes.c_char_p, ctypes.c_char_p, ctypes.c_char_p] ctypes.c_char_p, ctypes.c_char_p, ctypes.c_char_p, ctypes.c_char_p]
self.deFn = os.path.join(self.path,"IFS_inputdata/refs/DE405") self.deFn = os.path.join(self.path, "IFS_inputdata/refs/DE405")
self.PSTFn = os.path.join(self.path,"IFS_inputdata/refs/PST") self.PSTFn = os.path.join(self.path, "IFS_inputdata/refs/PST")
self.RFn = os.path.join(self.path,"IFS_inputdata/refs/R") self.RFn = os.path.join(self.path, "IFS_inputdata/refs/R")
self.ZolFn = os.path.join(self.path,"IFS_inputdata/refs/Zodiacal") self.ZolFn = os.path.join(self.path, "IFS_inputdata/refs/Zodiacal")
self.brightStarTabFn = os.path.join(self.path,"IFS_inputdata/refs/BrightGaia_with_csst_mag") self.brightStarTabFn = os.path.join(
self.path, "IFS_inputdata/refs/BrightGaia_with_csst_mag")
self.slcdll.Init(str.encode(self.deFn), str.encode( self.slcdll.Init(str.encode(self.deFn), str.encode(
self.PSTFn), str.encode(self.RFn), str.encode(self.ZolFn)) self.PSTFn), str.encode(self.RFn), str.encode(self.ZolFn))
...@@ -1878,7 +1871,7 @@ class IFSsimulator(): ...@@ -1878,7 +1871,7 @@ class IFSsimulator():
# interpolated zodical surface brightness at 0.5 um # interpolated zodical surface brightness at 0.5 um
zodi = pd.read_csv( zodi = pd.read_csv(
os.path.join(self.information['dir_path'],'IFS_inputdata/refs/zodi_map.dat'), sep='\\s+', header=None, comment='#') os.path.join(self.information['dir_path'], 'IFS_inputdata/refs/zodi_map.dat'), sep='\\s+', header=None, comment='#')
beta_angle = np.array([0, 5, 10, 15, 20, 25, 30, 45, 60, 75]) beta_angle = np.array([0, 5, 10, 15, 20, 25, 30, 45, 60, 75])
lamda_angle = np.array([0, 5, 10, 15, 20, 25, 30, 35, 40, 45, lamda_angle = np.array([0, 5, 10, 15, 20, 25, 30, 35, 40, 45,
60, 75, 90, 105, 120, 135, 150, 165, 180]) 60, 75, 90, 105, 120, 135, 150, 165, 180])
...@@ -1892,7 +1885,7 @@ class IFSsimulator(): ...@@ -1892,7 +1885,7 @@ class IFSsimulator():
# read the zodical spectrum in the ecliptic # read the zodical spectrum in the ecliptic
cat_spec = pd.read_csv( cat_spec = pd.read_csv(
os.path.join(self.information['dir_path'],'IFS_inputdata/refs/solar_spec.dat'), sep='\\s+', header=None, comment='#') os.path.join(self.information['dir_path'], 'IFS_inputdata/refs/solar_spec.dat'), sep='\\s+', header=None, comment='#')
wave = cat_spec[0].values # A wave = cat_spec[0].values # A
spec0 = cat_spec[1].values # spec0 = cat_spec[1].values #
zodi_norm = 252 # zodi_norm = 252 #
...@@ -1933,9 +1926,9 @@ class IFSsimulator(): ...@@ -1933,9 +1926,9 @@ class IFSsimulator():
# print(self.information) # print(self.information)
crLengths = np.loadtxt( crLengths = np.loadtxt(
os.path.join(self.information['dir_path'],self.information['cosmicraylengths'])) os.path.join(self.information['dir_path'], self.information['cosmicraylengths']))
crDists = np.loadtxt( crDists = np.loadtxt(
os.path.join(self.information['dir_path'],self.information['cosmicraydistance'])) os.path.join(self.information['dir_path'], self.information['cosmicraydistance']))
self.cr = dict(cr_u=crLengths[:, 0], cr_cdf=crLengths[:, 1], cr_cdfn=np.shape(crLengths)[0], self.cr = dict(cr_u=crLengths[:, 0], cr_cdf=crLengths[:, 1], cr_cdfn=np.shape(crLengths)[0],
cr_v=crDists[:, 0], cr_cde=crDists[:, 1], cr_cden=np.shape(crDists)[0]) cr_v=crDists[:, 0], cr_cde=crDists[:, 1], cr_cden=np.shape(crDists)[0])
...@@ -1991,22 +1984,23 @@ class IFSsimulator(): ...@@ -1991,22 +1984,23 @@ class IFSsimulator():
else: else:
ss = '_' ss = '_'
#
#
### create result father path; # ##create result father path;
if os.path.isdir(self.information['result_path']) is False: if os.path.isdir(self.information['result_path']) is False:
os.mkdir(self.information['result_path']) os.mkdir(self.information['result_path'])
self.result_path=os.path.join(self.information['result_path'], self.source+ss+result_day) self.result_path = os.path.join(
self.information['result_path'], self.source+ss+result_day)
print(self.result_path) print(self.result_path)
if os.path.isdir(self.result_path) is False: if os.path.isdir(self.result_path) is False:
os.mkdir(self.result_path) os.mkdir(self.result_path)
os.mkdir(os.path.join(self.result_path,'calibration_Data')) os.mkdir(os.path.join(self.result_path, 'calibration_Data'))
os.mkdir(os.path.join(self.result_path,'log_file')) os.mkdir(os.path.join(self.result_path, 'log_file'))
os.mkdir(os.path.join(self.result_path,'original_Calibration')) os.mkdir(os.path.join(self.result_path, 'original_Calibration'))
os.mkdir(os.path.join(self.result_path,'original_sky')) os.mkdir(os.path.join(self.result_path, 'original_sky'))
os.mkdir(os.path.join(self.result_path,'shift_rot_sky')) os.mkdir(os.path.join(self.result_path, 'shift_rot_sky'))
os.mkdir(os.path.join(self.result_path,'sky_Data')) os.mkdir(os.path.join(self.result_path, 'sky_Data'))
############################################################################## ##############################################################################
now = datetime.utcnow() now = datetime.utcnow()
...@@ -2014,7 +2008,7 @@ class IFSsimulator(): ...@@ -2014,7 +2008,7 @@ class IFSsimulator():
data_time = now.strftime("%Y-%m-%d-%H-%M-%S") data_time = now.strftime("%Y-%m-%d-%H-%M-%S")
############################################################ ############################################################
self.log = lg(os.path.join(self.result_path,'log_file/IFS_' + self.log = lg(os.path.join(self.result_path, 'log_file/IFS_' +
self.source+'_'+data_time+'_Num_'+str(simnumber)+'.log')) self.source+'_'+data_time+'_Num_'+str(simnumber)+'.log'))
self.log.info('STARTING A NEW SIMULATION') self.log.info('STARTING A NEW SIMULATION')
...@@ -2036,7 +2030,8 @@ class IFSsimulator(): ...@@ -2036,7 +2030,8 @@ class IFSsimulator():
self.HgArsigma = self.light_FWHM/2.35 # sigma value of the light source self.HgArsigma = self.light_FWHM/2.35 # sigma value of the light source
# load system optical and CCD efficiency data # load system optical and CCD efficiency data
matfn0 = os.path.join(self.information['dir_path'],'IFS_inputdata/TotalQ200923.mat') matfn0 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/TotalQ200923.mat')
self.log.info('Optical optical efficiency file path is: %s' % (matfn0)) self.log.info('Optical optical efficiency file path is: %s' % (matfn0))
da0 = sio.loadmat(matfn0) da0 = sio.loadmat(matfn0)
# optical efficiency of blue channel # optical efficiency of blue channel
...@@ -2047,7 +2042,8 @@ class IFSsimulator(): ...@@ -2047,7 +2042,8 @@ class IFSsimulator():
# load all useful data; # load all useful data;
# load wavefront data; # load wavefront data;
matfn2 = os.path.join(self.information['dir_path'],'IFS_inputdata/opd/opd_638nm.mat') matfn2 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/opd/opd_638nm.mat')
self.log.info('OPD0 file path is: %s' % (matfn2)) self.log.info('OPD0 file path is: %s' % (matfn2))
da2 = sio.loadmat(matfn2) da2 = sio.loadmat(matfn2)
opd0 = da2['opd'] # opd unit is in meter opd0 = da2['opd'] # opd unit is in meter
...@@ -2055,17 +2051,20 @@ class IFSsimulator(): ...@@ -2055,17 +2051,20 @@ class IFSsimulator():
self.pupil = abs(opd0) > 0.0 self.pupil = abs(opd0) > 0.0
#################### ####################
matfn2 = os.path.join(self.information['dir_path'],'IFS_inputdata/opd/opd1.fits') matfn2 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/opd/opd1.fits')
da = fits.open(matfn2) da = fits.open(matfn2)
self.opd1 = da[0].data self.opd1 = da[0].data
self.log.info('OPD1 file path is: %s' % (matfn2)) self.log.info('OPD1 file path is: %s' % (matfn2))
matfn2 = os.path.join(self.information['dir_path'],'IFS_inputdata/opd/opd2.fits') matfn2 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/opd/opd2.fits')
self.log.info('OPD2 file path is: %s' % (matfn2)) self.log.info('OPD2 file path is: %s' % (matfn2))
da = fits.open(matfn2) da = fits.open(matfn2)
self.opd2 = da[0].data self.opd2 = da[0].data
matfn2 = os.path.join(self.information['dir_path'],'IFS_inputdata/opd/opd3.fits') matfn2 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/opd/opd3.fits')
self.log.info('OPD3 file path is: %s' % (matfn2)) self.log.info('OPD3 file path is: %s' % (matfn2))
da = fits.open(matfn2) da = fits.open(matfn2)
self.opd3 = da[0].data self.opd3 = da[0].data
...@@ -2452,7 +2451,6 @@ class IFSsimulator(): ...@@ -2452,7 +2451,6 @@ class IFSsimulator():
# ############################################################################# # #############################################################################
def applyPoissonNoise(self): def applyPoissonNoise(self):
""" """
Returns Returns
------- -------
...@@ -2502,7 +2500,7 @@ class IFSsimulator(): ...@@ -2502,7 +2500,7 @@ class IFSsimulator():
Warning:: This method does not work if the input file has exactly one line. Warning:: This method does not work if the input file has exactly one line.
""" """
cosmetics = np.loadtxt( cosmetics = np.loadtxt(
os.path.join(self.information['dir_path'],self.information['cosmeticsfile_b'])) os.path.join(self.information['dir_path'], self.information['cosmeticsfile_b']))
self.log.info('cosmeticsfile_b path is: %s' % self.log.info('cosmeticsfile_b path is: %s' %
(self.information['cosmeticsfile_b'])) (self.information['cosmeticsfile_b']))
...@@ -2526,7 +2524,7 @@ class IFSsimulator(): ...@@ -2526,7 +2524,7 @@ class IFSsimulator():
############################################################################# #############################################################################
cosmetics = np.loadtxt( cosmetics = np.loadtxt(
os.path.join(self.information['dir_path'],self.information['cosmeticsfile_r'])) os.path.join(self.information['dir_path'], self.information['cosmeticsfile_r']))
self.log.info('cosmeticsfile_r path is: %s' % self.log.info('cosmeticsfile_r path is: %s' %
(self.information['cosmeticsfile_r'])) (self.information['cosmeticsfile_r']))
...@@ -3421,12 +3419,14 @@ class IFSsimulator(): ...@@ -3421,12 +3419,14 @@ class IFSsimulator():
filename_b = 'CSST_IFS_B_'+self.source+'_'+exp_start_str + \ filename_b = 'CSST_IFS_B_'+self.source+'_'+exp_start_str + \
'_'+exp_end_str+'_'+str(obsid)+'_B_L0_V'+sim_ver '_'+exp_end_str+'_'+str(obsid)+'_B_L0_V'+sim_ver
self.file_b = self.result_path+'/sky_Data/'+filename_b+'.fits' self.file_b = os.path.join(
self.result_path, 'sky_Data/'+filename_b+'.fits')
filename_r = 'CSST_IFS_R_'+self.source+'_'+exp_start_str + \ filename_r = 'CSST_IFS_R_'+self.source+'_'+exp_start_str + \
'_'+exp_end_str+'_'+str(obsid)+'_R_L0_V'+sim_ver '_'+exp_end_str+'_'+str(obsid)+'_R_L0_V'+sim_ver
self.file_r = self.result_path+'/sky_Data/'+filename_r + '.fits' self.file_r = os.path.join(
self.result_path, 'sky_Data/'+filename_r + '.fits')
else: else:
...@@ -3441,11 +3441,13 @@ class IFSsimulator(): ...@@ -3441,11 +3441,13 @@ class IFSsimulator():
filename_b = 'CSST_IFS_B_'+self.source+'_'+exp_start_str + \ filename_b = 'CSST_IFS_B_'+self.source+'_'+exp_start_str + \
'_'+exp_end_str+'_'+str(obsid)+'_B_L0_V'+sim_ver '_'+exp_end_str+'_'+str(obsid)+'_B_L0_V'+sim_ver
self.file_b = os.path.join(self.result_path,'calibration_Data/'+filename_b+'.fits') self.file_b = os.path.join(
self.result_path, 'calibration_Data/'+filename_b+'.fits')
filename_r = 'CSST_IFS_R_'+self.source+'_'+exp_start_str + \ filename_r = 'CSST_IFS_R_'+self.source+'_'+exp_start_str + \
'_'+exp_end_str+'_'+str(obsid)+'_R_L0_V'+sim_ver '_'+exp_end_str+'_'+str(obsid)+'_R_L0_V'+sim_ver
self.file_r = os.path.join(self.result_path,'calibration_Data/'+filename_r+'.fits') self.file_r = os.path.join(
self.result_path, 'calibration_Data/'+filename_r+'.fits')
# create a new FITS file, using HDUList instance # create a new FITS file, using HDUList instance
# #### layer 0 #### # #### layer 0 ####
...@@ -4281,19 +4283,19 @@ class IFSsimulator(): ...@@ -4281,19 +4283,19 @@ class IFSsimulator():
""" """
# read solar template # read solar template
solar_template = pd.read_csv(os.path.join(self.information['dir_path'],'IFS_inputdata/refs/solar_spec.dat'), sep='\\s+', solar_template = pd.read_csv(os.path.join(self.information['dir_path'], 'IFS_inputdata/refs/solar_spec.dat'), sep='\\s+',
header=None, comment='#') header=None, comment='#')
template_wave = solar_template[0].values template_wave = solar_template[0].values
template_flux = solar_template[1].values template_flux = solar_template[1].values
# read earth shine surface brightness # read earth shine surface brightness
earthshine_curve = pd.read_csv(os.path.join(self.information['dir_path'],'IFS_inputdata/refs/earthshine.dat'), earthshine_curve = pd.read_csv(os.path.join(self.information['dir_path'], 'IFS_inputdata/refs/earthshine.dat'),
header=None, comment='#') header=None, comment='#')
angle = earthshine_curve[0].values angle = earthshine_curve[0].values
surface_brightness = earthshine_curve[1].values surface_brightness = earthshine_curve[1].values
# read V-band throughtput # read V-band throughtput
cat_filter_V = pd.read_csv(os.path.join(self.information['dir_path'],'IFS_inputdata/refs/filter_Bessell_V.dat'), sep='\\s+', cat_filter_V = pd.read_csv(os.path.join(self.information['dir_path'], 'IFS_inputdata/refs/filter_Bessell_V.dat'), sep='\\s+',
header=None, comment='#') header=None, comment='#')
filter_wave = cat_filter_V[0].values filter_wave = cat_filter_V[0].values
filter_response = cat_filter_V[1].values filter_response = cat_filter_V[1].values
...@@ -4411,21 +4413,24 @@ class IFSsimulator(): ...@@ -4411,21 +4413,24 @@ class IFSsimulator():
################################################################ ################################################################
# ######## # ########
# #### load slicer_Qe1K.fits #### # #### load slicer_Qe1K.fits ####
slicerfile = os.path.join(self.information['dir_path'],'IFS_inputdata/Flatfield/slicer_QE_1K_230625.fits') slicerfile = os.path.join(
self.information['dir_path'], 'IFS_inputdata/Flatfield/slicer_QE_1K_230625.fits')
da = fits.open(slicerfile) da = fits.open(slicerfile)
self.log.info('hole Sim and slicer 1K QE file:%s' % (slicerfile)) self.log.info('hole Sim and slicer 1K QE file:%s' % (slicerfile))
slicer_Qe = da[0].data slicer_Qe = da[0].data
# #### load hole mask ###### # #### load hole mask ######
# load hole mask matrix # load hole mask matrix
file = os.path.join(self.information['dir_path'], 'IFS_inputdata/Hole/holemask_230612.fits') file = os.path.join(
self.information['dir_path'], 'IFS_inputdata/Hole/holemask_230612.fits')
self.log.info('hole mask file is %s' % (file)) self.log.info('hole mask file is %s' % (file))
da = fits.open(file) da = fits.open(file)
HoleMask = da[self.simnumber].data HoleMask = da[self.simnumber].data
# load HgAr data; # load HgAr data;
matfn3 = os.path.join(self.information['dir_path'],'IFS_inputdata/HgAr.mat') matfn3 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/HgAr.mat')
self.log.info('lamp flux file is : %s' % (matfn3)) self.log.info('lamp flux file is : %s' % (matfn3))
da3 = sio.loadmat(matfn3) da3 = sio.loadmat(matfn3)
HgArst = da3['HgArst'] # opd unit is in meter HgArst = da3['HgArst'] # opd unit is in meter
...@@ -4674,10 +4679,11 @@ class IFSsimulator(): ...@@ -4674,10 +4679,11 @@ class IFSsimulator():
data_time = now.strftime("%Y-%m-%d") data_time = now.strftime("%Y-%m-%d")
# write the actual file # write the actual file
bluefile = os.path.join(self.result_path,'original_Calibration/IFS_'+self.source + \ bluefile = os.path.join(self.result_path, 'original_Calibration/IFS_' +
'_'+data_time+'_'+str(self.simnumber)+'_B_original.fits') self.source + '_' + d ata_time + '_' +
redfile = os.path.join(self.result_path,'original_Calibration/IFS_'+self.source + \ str(self.simnumber)+'_B_original.fits')
'_'+data_time+'_'+str(self.simnumber)+'_R_original.fits') redfile = os.path.join(self.result_path, 'original_Calibration/IFS_' +
self.source+'_'+data_time+'_'+str(self.simnumber)+'_R_original.fits')
fits.writeto(bluefile, blue_img.array, overwrite=True) fits.writeto(bluefile, blue_img.array, overwrite=True)
fits.writeto(redfile, red_img.array, overwrite=True) fits.writeto(redfile, red_img.array, overwrite=True)
...@@ -4697,7 +4703,8 @@ class IFSsimulator(): ...@@ -4697,7 +4703,8 @@ class IFSsimulator():
newd = fits.HDUList([hdu1, hdu2]) newd = fits.HDUList([hdu1, hdu2])
filename = os.path.join(self.result_path,'calibration_Data/'+self.source+'_flux.fits') filename = os.path.join(
self.result_path, 'calibration_Data/'+self.source+'_flux.fits')
if self.simnumber == 1: if self.simnumber == 1:
newd.writeto(filename, overwrite=True) newd.writeto(filename, overwrite=True)
...@@ -4738,7 +4745,8 @@ class IFSsimulator(): ...@@ -4738,7 +4745,8 @@ class IFSsimulator():
############################################################################ ############################################################################
# consider the slice optical efficiency in different slicer channel # consider the slice optical efficiency in different slicer channel
slicer_QE_file = os.path.join(self.information['dir_path'],'IFS_inputdata/Flatfield/slicer_QE230625.fits') slicer_QE_file = os.path.join(
self.information['dir_path'], 'IFS_inputdata/Flatfield/slicer_QE230625.fits')
da = fits.open(slicer_QE_file) da = fits.open(slicer_QE_file)
self.log.info('slicer_QE_file path is: %s' % (slicer_QE_file)) self.log.info('slicer_QE_file path is: %s' % (slicer_QE_file))
slicer_Qe = da[0].data slicer_Qe = da[0].data
...@@ -4942,7 +4950,8 @@ class IFSsimulator(): ...@@ -4942,7 +4950,8 @@ class IFSsimulator():
# orbit parameters are not in currenct txt file # orbit parameters are not in currenct txt file
if self.orbit_pars[-1, 0] < t2jd: if self.orbit_pars[-1, 0] < t2jd:
self.orbit_file_num = self.orbit_file_num+1 self.orbit_file_num = self.orbit_file_num+1
fn = os.path.join(self.information['dir_path'] , 'IFS_inputdata/TianCe/orbit20160925/'+str(self.orbit_file_num)+'.txt') fn = os.path.join(
self.information['dir_path'], 'IFS_inputdata/TianCe/orbit20160925/'+str(self.orbit_file_num)+'.txt')
self.orbit_pars = np.loadtxt(fn) self.orbit_pars = np.loadtxt(fn)
self.orbit_exp_num = 0 self.orbit_exp_num = 0
...@@ -5119,8 +5128,10 @@ class IFSsimulator(): ...@@ -5119,8 +5128,10 @@ class IFSsimulator():
# PSFfilename='/media/yan//IFSsim/IFSsim Data/rot_shift_Img.fits' # PSFfilename='/media/yan//IFSsim/IFSsim Data/rot_shift_Img.fits'
# fits.writeto('/media/yan//IFSsim/IFSsim Data/rot_shift_subImg.fits',image0.array[50-32:50+32,50-32:50+32],overwrite=True ) # fits.writeto('/media/yan//IFSsim/IFSsim Data/rot_shift_subImg.fits',image0.array[50-32:50+32,50-32:50+32],overwrite=True )
hdu1.writeto(os.path.join(self.result_path,'shift_rot_sky/rot_shift_subImg_'+str(simnumber)+'.fits'), overwrite=True) hdu1.writeto(os.path.join(
fits.writeto(os.path.join(self.result_path,'shift_rot_sky/original_Img_'+str(simnumber)+'.fits'), Nimg, overwrite=True) self.result_path, 'shift_rot_sky/rot_shift_subImg_'+str(simnumber)+'.fits'), overwrite=True)
fits.writeto(os.path.join(
self.result_path, 'shift_rot_sky/original_Img_'+str(simnumber)+'.fits'), Nimg, overwrite=True)
##################################################################### #####################################################################
# ## do convolve image0 with PSF0 from primay CSST ### # ## do convolve image0 with PSF0 from primay CSST ###
...@@ -5285,7 +5296,6 @@ class IFSsimulator(): ...@@ -5285,7 +5296,6 @@ class IFSsimulator():
######################################################## ########################################################
##################################################################### #####################################################################
# stray light will cover 2% of input total light; # stray light will cover 2% of input total light;
if self.sky_noise: if self.sky_noise:
...@@ -5300,10 +5310,10 @@ class IFSsimulator(): ...@@ -5300,10 +5310,10 @@ class IFSsimulator():
self.image_r = red_img.array self.image_r = red_img.array
obsid = simnumber obsid = simnumber
bluefile = os.path.join(self.result_path,'original_sky/IFS_' + \ bluefile = os.path.join(self.result_path, 'original_sky/IFS_' +
self.source+'_'+str(obsid)+'_B.fits') self.source+'_'+str(obsid)+'_B.fits')
redfile = os.path.join(self.result_path,'original_sky/IFS_' + \ redfile = os.path.join(self.result_path, 'original_sky/IFS_' +
self.source+'_'+str(obsid)+'_R.fits') self.source+'_'+str(obsid)+'_R.fits')
fits.writeto(bluefile, blue_img.array, overwrite=True) fits.writeto(bluefile, blue_img.array, overwrite=True)
fits.writeto(redfile, red_img.array, overwrite=True) fits.writeto(redfile, red_img.array, overwrite=True)
...@@ -5333,13 +5343,15 @@ class IFSsimulator(): ...@@ -5333,13 +5343,15 @@ class IFSsimulator():
# load HgAr data; # load HgAr data;
if self.source == 'LAMP': if self.source == 'LAMP':
matfn3 = os.path.join(self.information['dir_path'],'IFS_inputdata/HgAr.mat') matfn3 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/HgAr.mat')
self.log.info('lamp flux file is : %s' % (matfn3)) self.log.info('lamp flux file is : %s' % (matfn3))
da3 = sio.loadmat(matfn3) da3 = sio.loadmat(matfn3)
HgArst = da3['HgArst'] # opd unit is in meter HgArst = da3['HgArst'] # opd unit is in meter
# load flat data # load flat data
if self.source == 'FLAT': if self.source == 'FLAT':
matfn3 = os.path.join(self.information['dir_path'],'IFS_inputdata/flat_light.mat') matfn3 = os.path.join(
self.information['dir_path'], 'IFS_inputdata/flat_light.mat')
self.log.info('flat flux file is : %s' % (matfn3)) self.log.info('flat flux file is : %s' % (matfn3))
da3 = sio.loadmat(matfn3) da3 = sio.loadmat(matfn3)
flat_light = da3['flat_light'] # opd unit is in meter flat_light = da3['flat_light'] # opd unit is in meter
...@@ -5508,7 +5520,7 @@ class IFSsimulator(): ...@@ -5508,7 +5520,7 @@ class IFSsimulator():
# print('time=',(end-start)) # print('time=',(end-start))
# consider the slice optical efficiency in different slicer channel # consider the slice optical efficiency in different slicer channel
da = fits.open( da = fits.open(
os.path.join(self.information['dir_path'],'IFS_inputdata/Flatfield/slicer_QE230625.fits')) os.path.join(self.information['dir_path'], 'IFS_inputdata/Flatfield/slicer_QE230625.fits'))
slicer_Qe = da[0].data slicer_Qe = da[0].data
img0 = img0*slicer_Qe img0 = img0*slicer_Qe
# ######### do the slice effect ################### # ######### do the slice effect ###################
...@@ -5622,11 +5634,11 @@ class IFSsimulator(): ...@@ -5622,11 +5634,11 @@ class IFSsimulator():
data_time = now.strftime("%Y-%m-%d") data_time = now.strftime("%Y-%m-%d")
# write the actual file # write the actual file
bluefile = os.path.join(self.result_path,'original_Calibration/IFS_'+self.source + \ bluefile = os.path.join(self.result_path, 'original_Calibration/IFS_'+self.source +
'_'+data_time+'_'+str(self.simnumber)+'_B_original.fits') '_'+data_time+'_'+str(self.simnumber)+'_B_original.fits')
redfile = os.path.join(self.result_path,'original_Calibration/IFS_'+self.source + \ redfile = os.path.join(self.result_path, 'original_Calibration/IFS_'+self.source +
'_'+data_time+'_'+str(self.simnumber)+'_R_original.fits') '_'+data_time+'_'+str(self.simnumber)+'_R_original.fits')
fits.writeto(bluefile, blue_img.array, overwrite=True) fits.writeto(bluefile, blue_img.array, overwrite=True)
fits.writeto(redfile, red_img.array, overwrite=True) fits.writeto(redfile, red_img.array, overwrite=True)
...@@ -5646,7 +5658,8 @@ class IFSsimulator(): ...@@ -5646,7 +5658,8 @@ class IFSsimulator():
newd = fits.HDUList([hdu1, hdu2]) newd = fits.HDUList([hdu1, hdu2])
filename = os.path.join(self.result_path,'calibration_Data/'+self.source+'_flux.fits') filename = os.path.join(
self.result_path, 'calibration_Data/'+self.source+'_flux.fits')
if self.simnumber == 1: if self.simnumber == 1:
newd.writeto(filename, overwrite=True) newd.writeto(filename, overwrite=True)
...@@ -5715,7 +5728,8 @@ class IFSsimulator(): ...@@ -5715,7 +5728,8 @@ class IFSsimulator():
if simnumber <= 200 and simnumber > 150: if simnumber <= 200 and simnumber > 150:
self.information['exptime'] = 1200 self.information['exptime'] = 1200
self.skyfilepath = os.path.join(self.information['dir_path'],self.information['sky_fitsin']) self.skyfilepath = os.path.join(
self.information['dir_path'], self.information['sky_fitsin'])
print('self.skyfilepath = ', self.skyfilepath) print('self.skyfilepath = ', self.skyfilepath)
...@@ -5732,7 +5746,7 @@ class IFSsimulator(): ...@@ -5732,7 +5746,7 @@ class IFSsimulator():
########################################## ##########################################
df = pd.read_csv( df = pd.read_csv(
os.path.join(self.information['dir_path'],'IFS_inputdata/TianCe/'+starcat)) os.path.join(self.information['dir_path'], 'IFS_inputdata/TianCe/'+starcat))
############################################################## ##############################################################
sn = self.simnumber-1 sn = self.simnumber-1
...@@ -5759,7 +5773,7 @@ class IFSsimulator(): ...@@ -5759,7 +5773,7 @@ class IFSsimulator():
# fn=father_path+'/IFS_inputdata/TianCe/orbit20160925/'+str(k)+'.txt'; # fn=father_path+'/IFS_inputdata/TianCe/orbit20160925/'+str(k)+'.txt';
fn = os.path.join(self.information['dir_path'], fn = os.path.join(self.information['dir_path'],
'IFS_inputdata/TianCe/orbit20160925/'+str(k)+'.txt') 'IFS_inputdata/TianCe/orbit20160925/'+str(k)+'.txt')
d = np.loadtxt(fn) d = np.loadtxt(fn)
for kk in range(len(d[:, 0])): for kk in range(len(d[:, 0])):
...@@ -5781,8 +5795,8 @@ class IFSsimulator(): ...@@ -5781,8 +5795,8 @@ class IFSsimulator():
else: else:
fn = os.path.join(self.information['dir_path'] , fn = os.path.join(self.information['dir_path'],
'IFS_inputdata/TianCe/orbit20160925/'+str(k+1)+'.txt') 'IFS_inputdata/TianCe/orbit20160925/'+str(k+1)+'.txt')
d = np.loadtxt(fn) d = np.loadtxt(fn)
self.orbit_pars = d self.orbit_pars = d
......
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