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Commit 9c21d3bd authored by Zhang Xin's avatar Zhang Xin
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fix header bug: no gain and gain order, fix led bug

parent 0de79e17
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ObservationSim/MockObject/FlatLED.py
View file @ 9c21d3bd
......@@ -35,12 +35,21 @@ cwaves_fwhm = {'LED1': 110, 'LED2': 120, 'LED3': 200, 'LED4': 300, 'LED5': 300,
'LED8': 260, 'LED9': 400, 'LED10': 370, 'LED11': 500, 'LED12': 1400, 'LED13': 90, 'LED14': 100}
# LED_QE = {'LED1': 0.3, 'LED2': 0.4, 'LED13': 0.5, 'LED14': 0.5, 'LED10': 0.4}
# e-/ms
fluxLED = {'LED1': 0.16478729, 'LED2': 0.084220931, 'LED3': 2.263360617, 'LED4': 2.190623489, 'LED5': 0.703504768,
'LED6': 0.446117963, 'LED7': 0.647122098, 'LED8': 0.922313442,
'LED9': 0.987278143, 'LED10': 2.043989167, 'LED11': 0.612571429, 'LED12': 1.228915663, 'LED13': 0.17029384,
'LED14': 0.27842925}
# fluxLED = {'LED1': 0.16478729, 'LED2': 0.084220931, 'LED3': 2.263360617, 'LED4': 2.190623489, 'LED5': 0.703504768,
# 'LED6': 0.446117963, 'LED7': 0.647122098, 'LED8': 0.922313442,
# 'LED9': 0.987278143, 'LED10': 2.043989167, 'LED11': 0.612571429, 'LED12': 1.228915663, 'LED13': 0.17029384,
# 'LED14': 0.27842925}
# e-/ms
fluxLED = {'LED1': 15, 'LED2': 15, 'LED3': 12.5, 'LED4': 9, 'LED5': 9,
'LED6': 9, 'LED7': 9, 'LED8': 9, 'LED9': 9, 'LED10': 12.5, 'LED11': 15, 'LED12':15, 'LED13': 12.5,
'LED14': 12.5}
# fluxLEDL = {'LED1': 10, 'LED2': 10, 'LED3': 10, 'LED4': 10, 'LED5': 10,
# 'LED6': 10, 'LED7': 10, 'LED8': 10, 'LED9': 10, 'LED10': 10, 'LED11': 10, 'LED12':10, 'LED13': 10,
# 'LED14': 10}
mirro_eff = {'GU':0.61, 'GV':0.8, 'GI':0.8}
# mirro_eff = {'GU':1, 'GV':1, 'GI':1}
class FlatLED(object):
def __init__(self, chip,filt, flatDir = None, logger=None):
......@@ -115,7 +124,7 @@ class FlatLED(object):
t_spec = np.trapz(f_spec*ccd_eff*fil_eff, w_list)
# print(i, np.mean(unitFlatImg), t_spec, exp_t)
unitFlatImg = unitFlatImg * t_spec
# print("DEBUG1:---------------",np.mean(unitFlatImg))
ledFlat = ledFlat+unitFlatImg*exp_t
return ledFlat
......@@ -134,6 +143,7 @@ class FlatLED(object):
led_wave = cwaves[led_type]
led_fwhm = cwaves_fwhm[led_type]
led_spec = self.gaussian1d_profile_led(led_wave, led_fwhm)
# print("DEBUG1:---------------",np.mean(ledFlat_))
ledspec_map = self.calculateLEDSpec(
skyMap=ledFlat_,
blueLimit=self.filt.blue_limit,
......@@ -160,11 +170,15 @@ class FlatLED(object):
xlist = np.arange(xc-x_radii, xc+x_radii, 0.5)
xlist_ = np.zeros(len(xlist) + 2)
xlist_[1:-1] = xlist
xlist_[0] = 2550
xlist_[-1] = 10000
xlist_[0] = 2000
xlist_[-1] = 18000
ids1 = xlist>xc-fwhm
ids2 = xlist[ids1]<xc+fwhm
data = np.exp((-(xlist-xc)*(xlist-xc))/(2*sigma*sigma))/(np.sqrt(2*math.pi)*sigma)
scale = 1/np.trapz(data[ids1][ids2], xlist[ids1][ids2])
data_ = np.zeros(len(xlist) + 2)
data_[1:-1] = data
data_[1:-1] = data*scale
# print("DEBUG:-------------------------------",np.sum(data_), scale)
return Table(np.array([xlist_.astype(np.float32), data_.astype(np.float32)]).T, names=('WAVELENGTH', 'FLUX'))
def calculateLEDSpec(self, skyMap=None, blueLimit=4200, redLimit=6500,
......@@ -232,7 +246,7 @@ class FlatLED(object):
tar_spec=spec,
band_start=tbstart, band_end=tbend,
conf=conf2,
flat_cube=flat_cube, ignoreBeam=['D', 'E'])
flat_cube=flat_cube)
spec_orders = sdp.compute_spec_orders()
......@@ -356,7 +370,7 @@ class FlatLED(object):
else:
fimg = fImg.array
fimg = fimg * pixelSize * pixelSize
# fimg = fimg * pixelSize * pixelSize
return fimg
......
ObservationSim/sim_steps/add_LED_flat.py
View file @ 9c21d3bd
......@@ -13,8 +13,15 @@ def add_LED_Flat(self, chip, filt, tel, pointing, catalog, obs_param):
print("LED OPEN--------")
led_obj = FlatLED(chip, filt)
led_flat = led_obj.drawObj_LEDFlat(led_type_list=obs_param["LED_TYPE"], exp_t_list=obs_param["LED_TIME"])
pf_map = led_flat
chip.img = chip.img + led_flat
if obs_param["shutter_effect"] == True:
pf_map = pf_map * chip.shutter_img
pf_map = np.array(pf_map, dtype='float32')
self.updateHeaderInfo(header_flag='ext', keys = ['SHTSTAT'], values = [True])
else:
self.updateHeaderInfo(header_flag='ext', keys = ['SHTSTAT','SHTOPEN0','SHTOPEN1','SHTCLOS0','SHTCLOS1'], values = [False,'','','',''])
chip.img = chip.img + pf_map
return chip, filt, tel, pointing
\ No newline at end of file
ObservationSim/sim_steps/readout_output.py
View file @ 9c21d3bd
......@@ -12,11 +12,6 @@ def add_prescan_overscan(self, chip, filt, tel, pointing, catalog, obs_param):
pre2=chip.prescan_y,
over1=chip.overscan_x,
over2=chip.overscan_y)
if obs_param["add_dark"] == True:
ny = int(chip.npix_y/2)
base_dark = (ny-1)*(chip.readout_time/ny)*chip.dark_noise
chip.img.array[(chip.prescan_y+ny):-(chip.prescan_y+ny),:] = bese_dark
return chip, filt, tel, pointing
def add_readout_noise(self, chip, filt, tel, pointing, catalog, obs_param):
......@@ -44,6 +39,12 @@ def quantization_and_output(self, chip, filt, tel, pointing, catalog, obs_param)
_, _ = self.prepare_headers(chip=chip, pointing=pointing)
self.updateHeaderInfo(header_flag='ext', keys = ['SHTSTAT','SHTOPEN0','SHTOPEN1','SHTCLOS0','SHTCLOS1'], values = [False,'','','',''])
gains1 = list(chip.gain_channel[0:8])
gains2 = list(chip.gain_channel[8:])
gains2.reverse()
gains = np.append(gains1,gains2)
self.updateHeaderInfo(header_flag='ext', keys = ['GAIN01','GAIN02','GAIN03','GAIN04','GAIN05','GAIN06','GAIN07','GAIN08','GAIN09','GAIN10','GAIN11','GAIN12','GAIN13','GAIN14','GAIN15','GAIN16'], values = gains)
if obs_param["format_output"] == True:
self.chip_output.Log_info(" Apply 1*16 format")
chip.img = chip_utils.formatOutput(GSImage=chip.img)
......
config/obs_config_Calibration_BIAS.yaml 0 → 100644
View file @ 9c21d3bd
---
###############################################
#
# Configuration file for CSST simulation
# For single exposure type:
# BIAS
# CSST-Sim Group, 2024/01/08
#
###############################################
# Observation type
obs_type: "BIAS"
obs_type_code: "120"
obs_id: "00000001"
# Define list of chips
run_chips: [17]
# Define observation sequence
call_sequence:
# # Accumulate fluxes from objects
# led_calib_model:
# #"LED": ['LED1','LED2','LED3','LED4','LED5','LED6','LED7','LED8','LED9','LED10','LED11','LED12','LED13','LED14'] or null
# #'LED1': '275', 'LED2': '310', 'LED3': '430', 'LED4': '505', 'LED5': '525', 'LED6': '590', 'LED7': '670',
# #'LED8': '760', 'LED9': '880', 'LED10': '940', 'LED11': '1050', 'LED12': '1550','LED13': '340', 'LED14': '365'
# LED_TYPE: ['LED13']
# LED_TIME: [1.]
# # if open shutter effect, led time must be >=2.6s
# shutter_effect: NO
# flat_level: set the total skybackground value (e-) in the exptime,if none,set null, or delete the key
# flat_level_filt: the vale of "flat_level" is in the filter "flat_level_filt", can set NUV, u, g, r, i, z, y, if
# none,set null,or delete the key
# sky_background:
# exptime: 150. # [s]
# shutter_effect: YES
# flat_fielding: YES
# enable_straylight_model: YES
# flat_level: 20000
# flat_level_filt: g
# Apply PRNU to accumulated photons
PRNU_effect: {}
# Accumulate photons caused by cosmic rays
cosmic_rays: {}
# Add Poission noise and dark current
poisson_and_dark:
add_dark: YES
# Simulate brighter fatter effects
bright_fatter: {}
# Add detector defects: hot/warm pixels, bad columns
detector_defects:
hot_pixels: YES
dead_pixels: YES
bad_columns: YES
# Apply response nonlinearity
nonlinearity: {}
# Apply CCD Saturation & Blooming
blooming: {}
# # Run CTE simulation
CTE_effect: {}
# Add prescan and overscan
prescan_overscan: {}
# Add bias
bias:
bias_16channel: YES
# Add readout noise
readout_noise: {}
# Apply gain
gain:
gain_16channel: YES
# Output the final image
quantization_and_output:
format_output: NO
...
\ No newline at end of file
config/obs_config_Calibration.yaml → config/obs_config_Calibration_FLAT.yaml
View file @ 9c21d3bd
......@@ -3,39 +3,42 @@
#
# Configuration file for CSST simulation
# For single exposure type:
# SCI-WIDE
# FLAT
# CSST-Sim Group, 2024/01/08
#
###############################################
# Observation type
obs_type: "DARK"
obs_type: "FLAT"
obs_type_code: "128"
obs_id: "00000001"
# Define list of chips
run_chips: [8]
run_chips: [17]
# Define observation sequence
call_sequence:
# Accumulate fluxes from objects
led_calib_model:
#"LED": ['LED1','LED2','LED3','LED4','LED5','LED6','LED7','LED8','LED9','LED10','LED11','LED12','LED13','LED14'] or null
#'LED1': '275', 'LED2': '310', 'LED3': '430', 'LED4': '505', 'LED5': '545', 'LED6': '590', 'LED7': '670',
#'LED8': '760', 'LED9': '940', 'LED10': '940', 'LED11': '1050', 'LED12': '1050','LED13': '340', 'LED14': '365'
LED_TYPE: ['LED5']
#'LED1': '275', 'LED2': '310', 'LED3': '430', 'LED4': '505', 'LED5': '525', 'LED6': '590', 'LED7': '670',
#'LED8': '760', 'LED9': '880', 'LED10': '940', 'LED11': '1050', 'LED12': '1550','LED13': '340', 'LED14': '365'
LED_TYPE: ['LED13']
LED_TIME: [1.]
# if open shutter effect, led time must be >=2.6s
shutter_effect: NO
# flat_level: set the total skybackground value (e-) in the exptime,if none,set null, or delete the key
# flat_level_filt: the vale of "flat_level" is in the filter "flat_level_filt", can set NUV, u, g, r, i, z, y, if
# none,set null,or delete the key
sky_background:
exptime: 150. # [s]
shutter_effect: YES
flat_fielding: YES
enable_straylight_model: YES
flat_level: 20000
flat_level_filt: g
# sky_background:
# exptime: 150. # [s]
# shutter_effect: YES
# flat_fielding: YES
# enable_straylight_model: YES
# flat_level: 20000
# flat_level_filt: g
# Apply PRNU to accumulated photons
PRNU_effect: {}
......
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