import galsim import numpy as np import astropy.constants as cons from astropy.table import Table from ObservationSim.MockObject._util import magToFlux, VC_A, convolveGaussXorders from ObservationSim.MockObject._util import integrate_sed_bandpass, getNormFactorForSpecWithABMAG, getObservedSED, getABMAG from ObservationSim.MockObject.SpecDisperser import SpecDisperser class MockObject(object): def __init__(self, param, logger=None): self.param = param if self.param["star"] == 0: self.type = "galaxy" elif self.param["star"] == 1: self.type = "star" elif self.param["star"] == 2: self.type = "quasar" self.id = self.param["id"] self.ra = self.param["ra"] self.dec = self.param["dec"] self.ra_orig = self.param["ra_orig"] self.dec_orig = self.param["dec_orig"] self.z = self.param["z"] self.sed_type = self.param["sed_type"] self.model_tag = self.param["model_tag"] self.mag_use_normal = self.param["mag_use_normal"] self.sed = None # Place holder for outputs self.av = self.param["av"] self.redden = self.param["redden"] self.pmra = self.param["pmra"] self.pmdec = self.param["pmdec"] self.rv = self.param["rv"] self.parallax = self.param["parallax"] self.g1 = self.param["g1"] self.g2 = self.param["g2"] self.thetaR = self.param["theta"] self.bfrac = self.param["bfrac"] self.hlr_disk = self.param["hlr_disk"] self.hlr_bulge = self.param["hlr_bulge"] self.e1_disk, self.e2_disk = 0., 0. self.e1_bulge, self.e2_bulge = 0., 0. self.additional_output_str = "" self.logger = logger def getMagFilter(self, filt): if filt.filter_type in ["GI", "GV", "GU"]: return self.param["mag_use_normal"] return self.param["mag_%s"%filt.filter_type] # (TEST) stamp size # return 13.0 def getFluxFilter(self, filt): return self.param["flux_%s"%filt.filter_type] def getNumPhotons(self, flux, tel, exptime=150.): pupil_area = tel.pupil_area * (100.)**2 # m^2 to cm^2 return flux * pupil_area * exptime def getElectronFluxFilt(self, filt, tel, exptime=150.): # photonEnergy = filt.getPhotonE() # flux = magToFlux(self.getMagFilter(filt)) # factor = 1.0e4 * flux/photonEnergy * VC_A * (1.0/filt.blue_limit - 1.0/filt.red_limit) # return factor * filt.efficiency * tel.pupil_area * exptime flux = self.getFluxFilter(filt) return flux * tel.pupil_area * exptime def getPosWorld(self): ra = self.param["ra"] dec = self.param["dec"] return galsim.CelestialCoord(ra=ra*galsim.degrees,dec=dec*galsim.degrees) def getPosImg_Offset_WCS(self, img, fdmodel=None, chip=None, verbose=True, img_header=None): self.posImg = img.wcs.toImage(self.getPosWorld()) self.localWCS = img.wcs.local(self.posImg) if (fdmodel is not None) and (chip is not None): if verbose: print("\n") print("Before field distortion:\n") print("x = %.2f, y = %.2f\n"%(self.posImg.x, self.posImg.y), flush=True) self.posImg = fdmodel.get_Distorted(chip=chip, pos_img=self.posImg) if verbose: print("After field distortion:\n") print("x = %.2f, y = %.2f\n"%(self.posImg.x, self.posImg.y), flush=True) x, y = self.posImg.x + 0.5, self.posImg.y + 0.5 self.x_nominal = int(np.floor(x + 0.5)) self.y_nominal = int(np.floor(y + 0.5)) dx = x - self.x_nominal dy = y - self.y_nominal self.offset = galsim.PositionD(dx, dy) from astropy import wcs if img_header is not None: self.real_wcs = galsim.FitsWCS(header=img_header) else: self.real_wcs = None return self.posImg, self.offset, self.localWCS, self.real_wcs def getRealPos(self,img, global_x = 0., global_y = 0., img_real_wcs = None): img_global_pos = galsim.PositionD(global_x, global_y) cel_pos = img.wcs.toWorld(img_global_pos) realPos = img_real_wcs.toImage(cel_pos) return realPos def drawObject(self, img, final, flux=None, filt=None, tel=None, exptime=150.): """ Draw (point like) object on img. Should be overided for extended source, e.g. galaxy... Paramter: img: the "canvas" final: final (after shear, PSF etc.) GSObject Return: img: the image with the GSObject added (or discarded) isUpdated: is the "canvas" been updated? (a flag for updating statistcs) """ isUpdated = True # Draw with FFT # stamp = final.drawImage(wcs=self.localWCS, offset=self.offset) # Draw with Photon Shoot stamp = final.drawImage(wcs=self.localWCS, method='phot', offset=self.offset) stamp.setCenter(self.x_nominal, self.y_nominal) if np.sum(np.isnan(stamp.array)) >= 1: stamp.setZero() bounds = stamp.bounds & img.bounds if bounds.area() == 0: isUpdated = False else: img[bounds] += stamp[bounds] return img, stamp, isUpdated def drawObj_multiband(self, tel, pos_img, psf_model, bandpass_list, filt, chip, nphotons_tot=None, g1=0, g2=0, exptime=150.): if nphotons_tot == None: nphotons_tot = self.getElectronFluxFilt(filt, tel, exptime) # print("nphotons_tot = ", nphotons_tot) try: full = integrate_sed_bandpass(sed=self.sed, bandpass=filt.bandpass_full) except Exception as e: print(e) self.logger.error(e) return False nphotons_sum = 0 photons_list = [] xmax, ymax = 0, 0 # (TEST) Galsim Parameters if self.getMagFilter(filt) <= 15: folding_threshold = 5.e-4 else: folding_threshold = 5.e-3 gsp = galsim.GSParams(folding_threshold=folding_threshold) real_pos = self.getRealPos(chip.img, global_x=self.posImg.x, global_y=self.posImg.y, img_real_wcs=self.real_wcs) x, y = real_pos.x + 0.5, real_pos.y + 0.5 x_nominal = int(np.floor(x + 0.5)) y_nominal = int(np.floor(y + 0.5)) dx = x - x_nominal dy = y - y_nominal offset = galsim.PositionD(dx, dy) real_wcs_local = self.real_wcs.local(real_pos) for i in range(len(bandpass_list)): bandpass = bandpass_list[i] try: sub = integrate_sed_bandpass(sed=self.sed, bandpass=bandpass) except Exception as e: print(e) self.logger.error(e) # return False continue ratio = sub/full if not (ratio == -1 or (ratio != ratio)): nphotons = ratio * nphotons_tot else: # return False continue nphotons_sum += nphotons # print("nphotons_sub-band_%d = %.2f"%(i, nphotons)) psf, pos_shear = psf_model.get_PSF(chip=chip, pos_img=pos_img, bandpass=bandpass, folding_threshold=folding_threshold) star = galsim.DeltaFunction(gsparams=gsp) star = star.withFlux(nphotons) star = galsim.Convolve(psf, star) # stamp = star.drawImage(wcs=self.localWCS, method='phot', offset=self.offset, save_photons=True) # xmax = max(xmax, stamp.xmax) # ymax = max(ymax, stamp.ymax) # photons = stamp.photons # photons.x += self.x_nominal # photons.y += self.y_nominal # photons_list.append(photons) stamp = star.drawImage(wcs=real_wcs_local, method='phot', offset=offset, save_photons=True) xmax = max(xmax, stamp.xmax) ymax = max(ymax, stamp.ymax) photons = stamp.photons photons.x += x_nominal photons.y += y_nominal photons_list.append(photons) stamp = galsim.ImageF(int(xmax * 1.1), int(ymax * 1.1)) stamp.wcs = self.real_wcs_local stamp.setCenter(x_nominal, y_nominal) bounds = stamp.bounds & galsim.BoundsD(0, chip.npix_x-1, 0, chip.npix_y-1) chip.img.setOrigin(0, 0) stamp[bounds] = chip.img[bounds] for i in range(len(photons_list)): if i == 0: chip.sensor.accumulate(photons_list[i], stamp) else: chip.sensor.accumulate(photons_list[i], stamp, resume=True) chip.img[bounds] = stamp[bounds] chip.img.setOrigin(chip.bound.xmin, chip.bound.ymin) # Test stamp size # print(xmax, ymax) # stamp = galsim.ImageF(int(xmax*1.1), int(ymax*1.1)) # stamp.wcs = self.localWCS # stamp.setCenter(self.x_nominal, self.y_nominal) # bounds = stamp.bounds & chip.img.bounds # stamp[bounds] = chip.img[bounds] # for i in range(len(photons_list)): # if i == 0: # chip.sensor.accumulate(photons_list[i], stamp) # else: # chip.sensor.accumulate(photons_list[i], stamp, resume=True) # # chip.img[bounds] = stamp[bounds] # print(chip.img.array.sum()) # print("nphotons_sum = ", nphotons_sum) del photons_list del stamp return True, pos_shear def addSLStoChipImage(self, sdp = None, chip = None, xOrderSigPlus = None): spec_orders = sdp.compute_spec_orders() for k, v in spec_orders.items(): img_s = v[0] img_s, orig_off = convolveGaussXorders(img_s, xOrderSigPlus[k]) origin_order_x = v[1] - orig_off origin_order_y = v[2] - orig_off specImg = galsim.ImageF(img_s) photons = galsim.PhotonArray.makeFromImage(specImg) photons.x += origin_order_x photons.y += origin_order_y xlen_imf = int(specImg.xmax - specImg.xmin + 1) ylen_imf = int(specImg.ymax - specImg.ymin + 1) stamp = galsim.ImageF(xlen_imf, ylen_imf) stamp.wcs = self.localWCS stamp.setOrigin(origin_order_x, origin_order_y) bounds = stamp.bounds & chip.img.bounds if bounds.area() == 0: continue stamp[bounds] = chip.img[bounds] chip.sensor.accumulate(photons, stamp) chip.img[bounds] = stamp[bounds] del stamp del spec_orders def drawObj_slitless(self, tel, pos_img, psf_model, bandpass_list, filt, chip, nphotons_tot=None, g1=0, g2=0, exptime=150., normFilter=None, grating_split_pos=3685): norm_thr_rang_ids = normFilter['SENSITIVITY'] > 0.001 sedNormFactor = getNormFactorForSpecWithABMAG(ABMag=self.param['mag_use_normal'], spectrum=self.sed, norm_thr=normFilter, sWave=np.floor(normFilter[norm_thr_rang_ids][0][0]), eWave=np.ceil(normFilter[norm_thr_rang_ids][-1][0])) # print(self.x_nominal, self.y_nominal, chip.bound) if sedNormFactor == 0: return False if self.getMagFilter(filt) <= 15: folding_threshold = 5.e-4 else: folding_threshold = 5.e-3 gsp = galsim.GSParams(folding_threshold=folding_threshold) normalSED = Table(np.array([self.sed['WAVELENGTH'], self.sed['FLUX'] * sedNormFactor]).T, names=('WAVELENGTH', 'FLUX')) xOrderSigPlus = {'A':1.3909419820029296,'B':1.4760376591236062,'C':4.035447379743442,'D':5.5684364343742825,'E':16.260021029735388} grating_split_pos_chip = chip.bound.xmin + grating_split_pos for i in range(len(bandpass_list)): bandpass = bandpass_list[i] psf, pos_shear = psf_model.get_PSF(chip=chip, pos_img=pos_img, bandpass=bandpass, folding_threshold=folding_threshold) star = galsim.DeltaFunction(gsparams=gsp) star = star.withFlux(tel.pupil_area * exptime) star = galsim.Convolve(psf, star) starImg = star.drawImage(nx=100, ny=100, wcs=self.localWCS) origin_star = [self.y_nominal - (starImg.center.y - starImg.ymin), self.x_nominal - (starImg.center.x - starImg.xmin)] gal_origin = [origin_star[0], origin_star[1]] gal_end = [origin_star[0] + starImg.array.shape[0] - 1, origin_star[1] + starImg.array.shape[1] - 1] if gal_origin[1] < grating_split_pos_chip < gal_end[1]: subSlitPos = int(grating_split_pos_chip - gal_origin[1] + 1) ## part img disperse subImg_p1 = starImg.array[:, 0:subSlitPos] star_p1 = galsim.Image(subImg_p1) origin_p1 = origin_star xcenter_p1 = min(self.x_nominal,grating_split_pos_chip-1) - chip.bound.xmin ycenter_p1 = self.y_nominal-chip.bound.ymin sdp_p1 = SpecDisperser(orig_img=star_p1, xcenter=xcenter_p1, ycenter=ycenter_p1, origin=origin_p1, tar_spec=normalSED, band_start=bandpass.blue_limit * 10, band_end=bandpass.red_limit * 10, conf=chip.sls_conf[0], isAlongY=0) self.addSLStoChipImage(sdp=sdp_p1, chip=chip, xOrderSigPlus = xOrderSigPlus) subImg_p2 = starImg.array[:, subSlitPos+1:starImg.array.shape[1]] star_p2 = galsim.Image(subImg_p2) origin_p2 = [origin_star[0], grating_split_pos_chip] xcenter_p2 = max(self.x_nominal, grating_split_pos_chip - 1) - chip.bound.xmin ycenter_p2 = self.y_nominal - chip.bound.ymin sdp_p2 = SpecDisperser(orig_img=star_p2, xcenter=xcenter_p2, ycenter=ycenter_p2, origin=origin_p2, tar_spec=normalSED, band_start=bandpass.blue_limit * 10, band_end=bandpass.red_limit * 10, conf=chip.sls_conf[1], isAlongY=0) self.addSLStoChipImage(sdp=sdp_p2, chip=chip,xOrderSigPlus = xOrderSigPlus) del sdp_p1 del sdp_p2 elif grating_split_pos_chip<=gal_origin[1]: sdp = SpecDisperser(orig_img=starImg, xcenter=self.x_nominal - chip.bound.xmin, ycenter=self.y_nominal - chip.bound.ymin, origin=origin_star, tar_spec=normalSED, band_start=bandpass.blue_limit * 10, band_end=bandpass.red_limit * 10, conf=chip.sls_conf[1], isAlongY=0) self.addSLStoChipImage(sdp=sdp, chip=chip, xOrderSigPlus = xOrderSigPlus) del sdp elif grating_split_pos_chip>=gal_end[1]: sdp = SpecDisperser(orig_img=starImg, xcenter=self.x_nominal - chip.bound.xmin, ycenter=self.y_nominal - chip.bound.ymin, origin=origin_star, tar_spec=normalSED, band_start=bandpass.blue_limit * 10, band_end=bandpass.red_limit * 10, conf=chip.sls_conf[0], isAlongY=0) self.addSLStoChipImage(sdp=sdp, chip=chip, xOrderSigPlus = xOrderSigPlus) del sdp del psf return True, pos_shear def SNRestimate(self, img_obj, flux, noise_level=0.0, seed=31415): img_flux = img_obj.added_flux stamp = img_obj.copy() * 0.0 rng = galsim.BaseDeviate(seed) gaussianNoise = galsim.GaussianNoise(rng, sigma=noise_level) stamp.addNoise(gaussianNoise) sig_obj = np.std(stamp.array) snr_obj = img_flux / sig_obj return snr_obj # def getObservedEll(self, g1=0, g2=0): # return 0.0, 0.0, 0.0, 0.0, 0.0, 0.0