update

Dockerfile

-FROM intel/oneapi-basekit:latest
-RUN apt update \
-    && apt -y install cmake pkg-config build-essential autoconf libtool libatlas-base-dev libfftw3-dev libopenblas-dev gawk
-RUN . /opt/intel/oneapi/setvars.sh --force

build.sh

+#docker run --rm -it intel/oneapi-hpckit:devel-ubuntu22.04 bash
+
+set -eux
+# remove intel repos
+rm /etc/apt/sources.list.d/*.list
+apt-get update
+apt-get install -y \
+  git \
+  cmake \
+  pkg-config \
+  build-essential \
+  autoconf \
+  libtool \
+  libatlas-base-dev \
+  libfftw3-dev \
+  libopenblas-dev \
+  libcfitsio-dev \
+  gawk
+#. /opt/intel/oneapi/setvars.sh --force
+
+# make link for icc (use icpx actually)
+#DIR_ICC=$(dirname "$(which icpx)")
+#echo 'icpx -fsycl "$@"' > "${DIR_ICC}"/icc
+##echo 'dpcpp "$@"' > "${DIR_ICC}"/icc
+#chmod +x "${DIR_ICC}"/icc
+
+cp -r /sextractor /build
+cd build
+sh autogen.sh
+./configure --enable-icc --enable-mkl --enable-auto-flags --enable-best-link
+make -j
+cp /build/src/sex /sextractor/sex
+chown 1000:1000 /sextractor/sex
+
+

docker-compose.yml

+# Test for pipeline
+version: '3'
+services:
+  build:
+    image: intel/oneapi-hpckit:devel-ubuntu22.04
+    container_name: build-sextractor
+    user: root
+    volumes:
+      - ./sextractor:/sextractor
+      - ./build.sh:/build.sh
+    command: >
+      bash /build.sh
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