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/*
profit.c
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
*
* Part of: SExtractor
*
* Authors: E.BERTIN (IAP)
*
* Contents: Fit an arbitrary profile combination to a detection.
*
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*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
*/
#ifdef HAVE_CONFIG_H
#include "config.h"
#endif
#ifdef HAVE_MATHIMF_H
#include <mathimf.h>
#else
#define _GNU_SOURCE
#include <math.h>
#endif
#ifdef HAVE_LOGF
#define LOGF logf
#else
#define LOGF log
#endif
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include "define.h"
#include "globals.h"
#include "prefs.h"
#include "fits/fitscat.h"
#include "levmar/lm.h"
#include "fft.h"
#include "fitswcs.h"
#include "check.h"
#include "pattern.h"
#include "psf.h"
#include "profit.h"
static double prof_interpolate(profstruct *prof, double *posin);
static double interpolate_pix(double *posin, double *pix, int *naxisn,
interpenum interptype);
static void make_kernel(double pos, double *kernel, interpenum interptype);
/*------------------------------- variables ---------------------------------*/
char profname[][32]={"background offset", "Sersic spheroid",
"De Vaucouleurs spheroid", "exponential disk", "spiral arms",
"bar", "inner ring", "outer ring", "tabulated model",
""};
int interp_kernwidth[5]={1,2,4,6,8};
int theniter, the_gal;
/* "Local" global variables; it seems dirty but it simplifies a lot */
/* interfacing to the LM routines */
static picstruct *the_field, *the_wfield;
profitstruct *theprofit;
/****** profit_init ***********************************************************
PROTO profitstruct profit_init(psfstruct *psf)
PURPOSE Allocate and initialize a new profile-fitting structure.
INPUT Pointer to PSF structure.
OUTPUT A pointer to an allocated profit structure.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 26/04/2008
***/
profitstruct *profit_init(psfstruct *psf)
{
profitstruct *profit;
int p, nprof,
backflag, spheroidflag, diskflag, barflag, armsflag;
QCALLOC(profit, profitstruct, 1);
profit->psf = psf;
profit->psfdft = NULL;
profit->nparam = 0;
QMALLOC(profit->prof, profstruct *, PROF_NPROF);
backflag = spheroidflag = diskflag = barflag = armsflag = 0;
nprof = 0;
for (p=0; p<PROF_NPROF; p++)
if (!backflag && FLAG(obj2.prof_offset_flux))
{
profit->prof[p] = prof_init(profit, PROF_BACK);
backflag = 1;
nprof++;
}
else if (!spheroidflag && FLAG(obj2.prof_spheroid_flux))
{
profit->prof[p] = prof_init(profit,
FLAG(obj2.prof_spheroid_sersicn)? PROF_SERSIC : PROF_DEVAUCOULEURS);
spheroidflag = 1;
nprof++;
}
else if (!diskflag && FLAG(obj2.prof_disk_flux))
{
profit->prof[p] = prof_init(profit, PROF_EXPONENTIAL);
diskflag = 1;
nprof++;
}
else if (diskflag && !barflag && FLAG(obj2.prof_bar_flux))
{
profit->prof[p] = prof_init(profit, PROF_BAR);
barflag = 1;
nprof++;
}
else if (barflag && !armsflag && FLAG(obj2.prof_arms_flux))
{
profit->prof[p] = prof_init(profit, PROF_ARMS);
armsflag = 1;
nprof++;
}
QMALLOC(profit->covar, double, profit->nparam*profit->nparam);
profit->nprof = nprof;
return profit;
}
/****** profit_end ************************************************************
PROTO void prof_end(profstruct *prof)
PURPOSE End (deallocate) a profile-fitting structure.
INPUT Prof structure.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 26/04/2008
***/
void profit_end(profitstruct *profit)
{
int p;
for (p=0; p<profit->nprof; p++)
prof_end(profit->prof[p]);
free(profit->prof);
free(profit->covar);
free(profit->psfdft);
free(profit);
return;
}
/****** profit_fit ************************************************************
PROTO void profit_fit(profitstruct *profit, picstruct *field,
picstruct *wfield, objstruct *obj, obj2struct *obj2)
PURPOSE Fit profile(s) convolved with the PSF to a detected object.
INPUT Array of profile structures,
Number of profiles,
Pointer to the profile-fitting structure,
Pointer to the field,
Pointer to the field weight,
Pointer to the obj.
OUTPUT Pointer to an allocated fit structure (containing details about the
fit).
NOTES It is a modified version of the lm_minimize() of lmfit.
AUTHOR E. Bertin (IAP)
***/
void profit_fit(profitstruct *profit,
picstruct *field, picstruct *wfield,
objstruct *obj, obj2struct *obj2)
{
profitstruct pprofit;
patternstruct *pattern;
psfstruct *psf;
checkstruct *check;
double psf_fwhm, a , cp,sp, emx2,emy2,emxy, dchi2, err;
int i,j,p, nparam, ncomp, nprof;
nprof = profit->nprof;
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if (profit->psfdft)
{
QFREE(profit->psfdft);
}
psf = profit->psf;
profit->pixstep = psf->pixstep;
/* Create pixmaps at image resolution */
psf_fwhm = psf->masksize[0]*psf->pixstep;
profit->objnaxisn[0] = (((int)((obj->xmax-obj->xmin+1) + psf_fwhm + 0.499)
*1.2)/2)*2 + 1;
profit->objnaxisn[1] = (((int)((obj->ymax-obj->ymin+1) + psf_fwhm + 0.499)
*1.2)/2)*2 + 1;
profit->ix = (int)(obj->mx + 0.49999);/* internal convention: 1st pix = 0 */
profit->iy = (int)(obj->my + 0.49999);/* internal convention: 1st pix = 0 */
if (profit->objnaxisn[1]<profit->objnaxisn[0])
profit->objnaxisn[1] = profit->objnaxisn[0];
else
profit->objnaxisn[0] = profit->objnaxisn[1];
/* Use (dirty) global variables to interface with lmfit */
the_field = field;
the_wfield = wfield;
theprofit = profit;
profit->obj = obj;
profit->obj2 = obj2;
QMALLOC(profit->objpix, PIXTYPE, profit->objnaxisn[0]*profit->objnaxisn[1]);
QMALLOC(profit->objweight, PIXTYPE,profit->objnaxisn[0]*profit->objnaxisn[1]);
QMALLOC(profit->lmodpix, PIXTYPE, profit->objnaxisn[0]*profit->objnaxisn[1]);
profit->nresi = profit_copyobjpix(profit, field, wfield);
if (profit->nresi < nparam)
{
if (FLAG(obj2.prof_vector))
for (p=0; p<nparam; p++)
obj2->prof_vector[p] = 0.0;
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obj2->prof_niter = 0;
return;
}
QMALLOC(profit->resi, double, profit->nresi);
/* Create pixmap at PSF resolution */
profit->modnaxisn[0] =
((int)(profit->objnaxisn[0]/profit->pixstep +0.4999)/2+1)*2;
profit->modnaxisn[1] =
((int)(profit->objnaxisn[1]/profit->pixstep +0.4999)/2+1)*2;
if (profit->modnaxisn[1] < profit->modnaxisn[0])
profit->modnaxisn[1] = profit->modnaxisn[0];
else
profit->modnaxisn[0] = profit->modnaxisn[1];
/* Allocate memory for the complete model */
QCALLOC(profit->modpix, double, profit->modnaxisn[0]*profit->modnaxisn[1]);
QMALLOC(profit->psfpix, double, profit->modnaxisn[0]*profit->modnaxisn[1]);
/* Allocate memory for the partial model */
QMALLOC(profit->pmodpix, float, profit->modnaxisn[0]*profit->modnaxisn[1]);
/* Compute the local PSF */
profit_psf(profit);
/* Set initial guesses and boundaries */
obj2->prof_flag = 0;
profit->sigma = obj->sigbkg;
profit_resetparams(profit);
the_gal++;
/* Actual minimisation */
profit->niter = profit_minimize(profit, PROFIT_MAXITER);
profit_residuals(profit,field,wfield, 10.0, profit->param,profit->resi);
QMEMCPY(profit->paraminit, oldparaminit, double, nparam);
if (profit_setparam(profit, PARAM_ARMS_PITCH, 160.0, 130.0, 175.0)==RETURN_OK)
{
oldchi2 = profit->chi2;
oldniter = profit->niter;
profit_resetparams(profit);
profit_setparam(profit, PARAM_ARMS_PITCH, 160.0, 130.0, 175.0);
profit->niter = profit_minimize(profit, PROFIT_MAXITER);
if (profit->chi2 > oldchi2)
{
memcpy(profit->paraminit, oldparaminit, nparam*sizeof(double));
profit->chi2 = oldchi2;
profit->niter = oldniter;
}
else
obj2->prof_flag |= PROFIT_FLIPPED;
}
/* Convert covariance matrix to bound space */
profit_covarunboundtobound(profit);
for (p=0; p<nparam; p++)
profit->paramerr[p]= sqrt(profit->covar[p*(nparam+1)]);
/* Equate param and paraminit vectors to avoid confusion later on */
for (p=0; p<profit->nparam; p++)
profit->param[p] = profit->paraminit[p];
/* CHECK-Images */
if ((check = prefs.check[CHECK_SUBPROFILES]))
{
profit_residuals(profit,field,wfield, 0.0, profit->param,profit->resi);
addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
profit->ix,profit->iy, -1.0);
}
if ((check = prefs.check[CHECK_PROFILES]))
{
profit_residuals(profit,field,wfield, 0.0, profit->param,profit->resi);
addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
profit->ix,profit->iy, 1.0);
}
/* Fill measurement parameters */
if (FLAG(obj2.prof_vector))
{
for (p=0; p<nparam; p++)
obj2->prof_vector[p]= profit->param[p];
}
if (FLAG(obj2.prof_errvector))
{
for (p=0; p<nparam; p++)
obj2->prof_errvector[p]= profit->paramerr[p];
}
obj2->prof_niter = profit->niter;
obj2->flux_prof = profit->flux;
if (FLAG(obj2.fluxerr_prof))
{
err = 0.0;
i = j = 0; /* avoid gcc -Wall warning */
if (profit->paramlist[PARAM_DISK_FLUX])
{
i = profit->paramindex[PARAM_DISK_FLUX];
err += profit->covar[i*(nparam+1)];
}
if (profit->paramlist[PARAM_SPHEROID_FLUX])
{
j = profit->paramindex[PARAM_SPHEROID_FLUX];
err += profit->covar[j*(nparam+1)];
}
if (profit->paramlist[PARAM_DISK_FLUX]
&& profit->paramlist[PARAM_SPHEROID_FLUX])
err += profit->covar[i+j*nparam]+profit->covar[j+i*nparam];
obj2->fluxerr_prof = err>0.0? sqrt(err): 0.0;
}
obj2->prof_chi2 = (profit->nresi > profit->nparam)?
profit->chi2 / (profit->nresi - profit->nparam) : 0.0;
if (FLAG(obj2.x_prof))
{
i = profit->paramindex[PARAM_X];
j = profit->paramindex[PARAM_Y];
/*-- Model coordinates follow the FITS convention (first pixel at 1,1) */
if (profit->paramlist[PARAM_X])
{
obj2->x_prof = profit->ix + *profit->paramlist[PARAM_X] + 1.0;
obj2->poserrmx2_prof = emx2 = profit->covar[i*(nparam+1)];
}
else
emx2 = 0.0;
if (profit->paramlist[PARAM_Y])
{
obj2->y_prof = profit->iy + *profit->paramlist[PARAM_Y] + 1.0;
obj2->poserrmy2_prof = emy2 = profit->covar[j*(nparam+1)];
}
else
emy2 = 0.0;
if (profit->paramlist[PARAM_X] && profit->paramlist[PARAM_Y])
obj2->poserrmxy_prof = emxy = profit->covar[i+j*nparam];
else
emxy = 0.0;
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/*-- Error ellipse parameters */
if (FLAG(obj2.poserra_prof))
{
double pmx2,pmy2,temp,theta;
if (fabs(temp=emx2-emy2) > 0.0)
theta = atan2(2.0 * emxy,temp) / 2.0;
else
theta = PI/4.0;
temp = sqrt(0.25*temp*temp+ emxy*emxy);
pmy2 = pmx2 = 0.5*(emx2+emy2);
pmx2+=temp;
pmy2-=temp;
obj2->poserra_prof = (float)sqrt(pmx2);
obj2->poserrb_prof = (float)sqrt(pmy2);
obj2->poserrtheta_prof = theta*180.0/PI;
}
if (FLAG(obj2.poserrcxx_prof))
{
double temp;
obj2->poserrcxx_prof = (float)(emy2/(temp=emx2*emy2-emxy*emxy));
obj2->poserrcyy_prof = (float)(emx2/temp);
obj2->poserrcxy_prof = (float)(-2*emxy/temp);
}
}
if (FLAG(obj2.prof_mx2))
{
memset(profit->modpix, 0,
profit->modnaxisn[0]*profit->modnaxisn[1]*sizeof(double));
for (p=0; p<profit->nprof; p++)
prof_add(profit->prof[p], profit);
profit_moments(profit);
}
/* Bulge */
if (FLAG(obj2.prof_spheroid_flux))
{
obj2->prof_spheroid_flux = *profit->paramlist[PARAM_SPHEROID_FLUX];
obj2->prof_spheroid_fluxerr =
profit->paramerr[profit->paramindex[PARAM_SPHEROID_FLUX]];
obj2->prof_spheroid_reff = *profit->paramlist[PARAM_SPHEROID_REFF];
obj2->prof_spheroid_refferr =
profit->paramerr[profit->paramindex[PARAM_SPHEROID_REFF]];
obj2->prof_spheroid_aspect = *profit->paramlist[PARAM_SPHEROID_ASPECT];
obj2->prof_spheroid_aspecterr =
profit->paramerr[profit->paramindex[PARAM_SPHEROID_ASPECT]];
obj2->prof_spheroid_theta =
fmod_m90_p90(*profit->paramlist[PARAM_SPHEROID_POSANG]);
obj2->prof_spheroid_thetaerr =
profit->paramerr[profit->paramindex[PARAM_SPHEROID_POSANG]];
if (FLAG(obj2.prof_spheroid_sersicn))
{
obj2->prof_spheroid_sersicn = *profit->paramlist[PARAM_SPHEROID_SERSICN];
obj2->prof_spheroid_sersicnerr =
profit->paramerr[profit->paramindex[PARAM_SPHEROID_SERSICN]];
}
}
/* Disk */
if (FLAG(obj2.prof_disk_flux))
{
obj2->prof_disk_flux = *profit->paramlist[PARAM_DISK_FLUX];
obj2->prof_disk_fluxerr =
profit->paramerr[profit->paramindex[PARAM_DISK_FLUX]];
obj2->prof_disk_scale = *profit->paramlist[PARAM_DISK_SCALE];
obj2->prof_disk_scaleerr =
profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]];
obj2->prof_disk_aspect = *profit->paramlist[PARAM_DISK_ASPECT];
obj2->prof_disk_aspecterr =
profit->paramerr[profit->paramindex[PARAM_DISK_ASPECT]];
obj2->prof_disk_theta = fmod_m90_p90(*profit->paramlist[PARAM_DISK_POSANG]);
obj2->prof_disk_thetaerr =
profit->paramerr[profit->paramindex[PARAM_DISK_POSANG]];
if (FLAG(obj2.prof_disk_inclination))
{
obj2->prof_disk_inclination = acos(obj2->prof_disk_aspect) / DEG;
if (FLAG(obj2.prof_disk_inclinationerr))
{
a = sqrt(1.0-obj2->prof_disk_aspect*obj2->prof_disk_aspect);
obj2->prof_disk_inclinationerr = obj2->prof_disk_aspecterr
/(a>0.1? a : 0.1)/DEG;
}
}
/* Disk pattern */
if (prefs.pattern_flag)
{
profit_residuals(profit,field,wfield, PROFIT_DYNPARAM,
profit->param,profit->resi);
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pattern = pattern_init(profit, prefs.pattern_type,
prefs.prof_disk_patternncomp);
pattern_fit(pattern, profit);
if (FLAG(obj2.prof_disk_patternspiral))
obj2->prof_disk_patternspiral = pattern_spiral(pattern);
if (FLAG(obj2.prof_disk_patternvector))
{
ncomp = pattern->size[2];
for (p=0; p<ncomp; p++)
obj2->prof_disk_patternvector[p] = (float)pattern->coeff[p];
}
if (FLAG(obj2.prof_disk_patternmodvector))
{
ncomp = pattern->ncomp*pattern->nfreq;
for (p=0; p<ncomp; p++)
obj2->prof_disk_patternmodvector[p] = (float)pattern->mcoeff[p];
}
if (FLAG(obj2.prof_disk_patternargvector))
{
ncomp = pattern->ncomp*pattern->nfreq;
for (p=0; p<ncomp; p++)
obj2->prof_disk_patternargvector[p] = (float)pattern->acoeff[p];
}
pattern_end(pattern);
}
/* Bar */
if (FLAG(obj2.prof_bar_flux))
{
obj2->prof_bar_flux = *profit->paramlist[PARAM_BAR_FLUX];
obj2->prof_bar_fluxerr =
profit->paramerr[profit->paramindex[PARAM_BAR_FLUX]];
obj2->prof_bar_length = *profit->paramlist[PARAM_ARMS_START]
**profit->paramlist[PARAM_DISK_SCALE];
obj2->prof_bar_lengtherr = *profit->paramlist[PARAM_ARMS_START]
* profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]]
+ *profit->paramlist[PARAM_DISK_SCALE]
* profit->paramerr[profit->paramindex[PARAM_ARMS_START]];
obj2->prof_bar_aspect = *profit->paramlist[PARAM_BAR_ASPECT];
obj2->prof_bar_aspecterr =
profit->paramerr[profit->paramindex[PARAM_BAR_ASPECT]];
obj2->prof_bar_posang =
fmod_m90_p90(*profit->paramlist[PARAM_ARMS_POSANG]);
obj2->prof_bar_posangerr =
profit->paramerr[profit->paramindex[PARAM_ARMS_POSANG]];
if (FLAG(obj2.prof_bar_theta))
{
cp = cos(obj2->prof_bar_posang*DEG);
sp = sin(obj2->prof_bar_posang*DEG);
a = obj2->prof_disk_aspect;
obj2->prof_bar_theta = fmod_m90_p90(atan2(a*sp,cp)/DEG
+ obj2->prof_disk_theta);
obj2->prof_bar_thetaerr = obj2->prof_bar_posangerr*a/(cp*cp+a*a*sp*sp);
}
/* Arms */
if (FLAG(obj2.prof_arms_flux))
{
obj2->prof_arms_flux = *profit->paramlist[PARAM_ARMS_FLUX];
obj2->prof_arms_fluxerr =
profit->paramerr[profit->paramindex[PARAM_ARMS_FLUX]];
obj2->prof_arms_pitch =
fmod_m90_p90(*profit->paramlist[PARAM_ARMS_PITCH]);
obj2->prof_arms_pitcherr =
profit->paramerr[profit->paramindex[PARAM_ARMS_PITCH]];
obj2->prof_arms_start = *profit->paramlist[PARAM_ARMS_START]
**profit->paramlist[PARAM_DISK_SCALE];
obj2->prof_arms_starterr = *profit->paramlist[PARAM_ARMS_START]
* profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]]
+ *profit->paramlist[PARAM_DISK_SCALE]
* profit->paramerr[profit->paramindex[PARAM_ARMS_START]];
obj2->prof_arms_quadfrac = *profit->paramlist[PARAM_ARMS_QUADFRAC];
obj2->prof_arms_quadfracerr =
profit->paramerr[profit->paramindex[PARAM_ARMS_QUADFRAC]];
obj2->prof_arms_posang =
fmod_m90_p90(*profit->paramlist[PARAM_ARMS_POSANG]);
obj2->prof_arms_posangerr =
profit->paramerr[profit->paramindex[PARAM_ARMS_POSANG]];
}
}
}
if (FLAG(obj2.prof_class_star))
{
pprofit = *profit;
memset(pprofit.paramindex, 0, PARAM_NPARAM*sizeof(int));
memset(pprofit.paramlist, 0, PARAM_NPARAM*sizeof(double *));
pprofit.nparam = 0;
QMALLOC(pprofit.prof, profstruct *, 1);
pprofit.prof[0] = prof_init(&pprofit, PROF_DIRAC);
QMALLOC(pprofit.covar, double, pprofit.nparam*pprofit.nparam);
pprofit.nprof = 1;
profit_resetparams(&pprofit);
if (profit->paramlist[PARAM_X] && profit->paramlist[PARAM_Y])
{
pprofit.paraminit[pprofit.paramindex[PARAM_X]] = *profit->paramlist[PARAM_X];
pprofit.paraminit[pprofit.paramindex[PARAM_Y]] = *profit->paramlist[PARAM_Y];
}
pprofit.paraminit[pprofit.paramindex[PARAM_DISK_FLUX]] = profit->flux;
pprofit.niter = profit_minimize(&pprofit, PROFIT_MAXITER);
profit_residuals(&pprofit,field,wfield, 10.0, pprofit.param,pprofit.resi);
dchi2 = 0.5*(pprofit.chi2 - profit->chi2);
obj2->prof_class_star = dchi2 < 50.0?
(dchi2 > -50.0? 2.0/(1.0+exp(dchi2)) : 2.0) : 0.0;
if (profit->flux > 0.0 && pprofit.flux > 0.0)
obj2->prof_concentration = -2.5*log10(pprofit.flux / profit->flux);
else if (profit->flux > 0.0)
obj2->prof_concentration = 99.0;
else if (pprofit.flux > 0.0)
obj2->prof_concentration = -99.0;
prof_end(pprofit.prof[0]);
free(pprofit.prof);
free(pprofit.covar);
}
/* clean up. */
free(profit->modpix);
free(profit->psfpix);
free(profit->pmodpix);
free(profit->lmodpix);
free(profit->objpix);
free(profit->objweight);
free(profit->resi);
return;
}
/****** profit_psf ************************************************************
PROTO void profit_psf(profitstruct *profit)
PURPOSE Build the local PSF at a given resolution.
INPUT Profile-fitting structure.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
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***/
void profit_psf(profitstruct *profit)
{
double posin[2], posout[2], dnaxisn[2],
*pixout,
xcout,ycout, xcin,ycin, invpixstep, flux, norm;
int d,i;
psf = profit->psf;
psf_build(psf);
xcout = (double)(profit->modnaxisn[0]/2) + 1.0; /* FITS convention */
ycout = (double)(profit->modnaxisn[1]/2) + 1.0; /* FITS convention */
xcin = (psf->masksize[0]/2) + 1.0; /* FITS convention */
ycin = (psf->masksize[1]/2) + 1.0; /* FITS convention */
invpixstep = profit->pixstep / psf->pixstep;
/* Initialize multi-dimensional counters */
for (d=0; d<2; d++)
{
posout[d] = 1.0; /* FITS convention */
dnaxisn[d] = profit->modnaxisn[d]+0.5;
}
/* Remap each pixel */
pixout = profit->psfpix;
flux = 0.0;
for (i=profit->modnaxisn[0]*profit->modnaxisn[1]; i--;)
{
posin[0] = (posout[0] - xcout)*invpixstep + xcin;
posin[1] = (posout[1] - ycout)*invpixstep + ycin;
flux += ((*(pixout++) = interpolate_pix(posin, psf->maskloc,
psf->masksize, INTERP_LANCZOS3)));
for (d=0; d<2; d++)
if ((posout[d]+=1.0) < dnaxisn[d])
break;
else
posout[d] = 1.0;
}
/* Normalize PSF flux (just in case...) */
flux *= psf->pixstep*psf->pixstep;
if (fabs(flux) > 0.0)
{
norm = 1.0/flux;
pixout = profit->psfpix;
for (i=profit->modnaxisn[0]*profit->modnaxisn[1]; i--;)
*(pixout++) *= norm;
}
return;
}
/****** profit_findinit *******************************************************
PROTO void profit_findinit(profitstruct *profit)
PURPOSE Find a suitable set of initialisation parameters
INPUT Pointer to the profit structure involved in the fit.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 16/04/2008
***/
void profit_findinit(profitstruct *profit)
{
int p;
for (p=0; p<profit->nprof; p++)
switch (profit->prof[p]->code)
{
default:
break;
}
return;
}
/****** profit_minimize *******************************************************
PROTO void profit_minimize(profitstruct *profit)
PURPOSE Provide a function returning residuals to lmfit.
INPUT Pointer to the profit structure involved in the fit,
maximum number of iterations.
OUTPUT Number of iterations used.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 23/05/2008
***/
int profit_minimize(profitstruct *profit, int niter)
{
double lm_opts[5], info[LM_INFO_SZ];
int m,n;
/* Allocate work space */
n = profit->nparam;
m = profit->nresi;
memset(profit->resi, 0, profit->nresi*sizeof(double));
memset(profit->covar, 0, profit->nparam*profit->nparam*sizeof(double));
profit_boundtounbound(profit, profit->paraminit);
/* Perform fit */
lm_opts[0] = 1.0e-3;
lm_opts[1] = 1.0e-18;
lm_opts[2] = 1.0e-18;
lm_opts[3] = 1.0e-18;
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lm_opts[4] = 1.0e-6;
niter = dlevmar_dif(profit_evaluate, profit->paraminit, profit->resi,
n, m, niter, lm_opts, info, NULL, profit->covar, profit);
profit_unboundtobound(profit, profit->paraminit);
return niter;
}
/****** profit_printout *******************************************************
PROTO void profit_printout(int n_par, double* par, int m_dat, double* fvec,
void *data, int iflag, int iter, int nfev )
PURPOSE Provide a function to print out results to lmfit.
INPUT Number of fitted parameters,
pointer to the vector of parameters,
number of data points,
pointer to the vector of residuals (output),
pointer to the data structure (unused),
0 (init) 1 (outer loop) 2(inner loop) -1(terminated),
outer loop counter,
number of calls to evaluate().
OUTPUT -.
NOTES Input arguments are there only for compatibility purposes (unused)
AUTHOR E. Bertin (IAP)
VERSION 17/09/2008
***/
void profit_printout(int n_par, double* par, int m_dat, double* fvec,
void *data, int iflag, int iter, int nfev )
{
checkstruct *check;
profitstruct *profit;
char filename[256];
static int itero;
profit = (profitstruct *)data;
if (0 && (iter!=itero || iter<0))
{
if (iter<0)
itero++;
else
itero = iter;
sprintf(filename, "check_%d_%04d.fits", the_gal, itero);
check=initcheck(filename, CHECK_PROFILES, 0);
reinitcheck(the_field, check);
addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
profit->ix,profit->iy, 1.0);
reendcheck(the_field, check);
endcheck(check);
}
return;
}
/****** profit_evaluate ******************************************************
PROTO void profit_evaluate(double *par, double *fvec, int m, int n,
void *adata)
PURPOSE Provide a function returning residuals to levmar.
INPUT Pointer to the vector of parameters,
pointer to the vector of residuals (output),
number of model parameters,
number of data points,
pointer to a data structure (unused).
OUTPUT -.
NOTES Input arguments are there only for compatibility purposes (unused)
AUTHOR E. Bertin (IAP)
VERSION 18/09/2008
***/
void profit_evaluate(double *par, double *fvec, int m, int n,
void *adata)
{
profitstruct *profit;
profit = (profitstruct *)adata;
profit_unboundtobound(profit, par);
profit_residuals(profit, the_field, the_wfield, PROFIT_DYNPARAM, par, fvec);
profit_boundtounbound(profit, par);
profit_printout(m, par, n, fvec, adata, 0, -1, 0 );
return;
}
/****** profit_residuals ******************************************************
PROTO double *prof_residuals(profitstruct *profit, picstruct *field,
picstruct *wfield, double dynparam, double *param, double *resi)
PURPOSE Compute the vector of residuals between the data and the galaxy
profile model.
INPUT Profile-fitting structure,
pointer to the field,
pointer to the field weight,
dynamic compression parameter (0=no compression),
pointer to the model parameters (output),
pointer to the computed residuals (output).
OUTPUT Vector of residuals.
NOTES -.
AUTHOR E. Bertin (IAP)
***/
double *profit_residuals(profitstruct *profit, picstruct *field,
picstruct *wfield, double dynparam, double *param, double *resi)
{
int p;
memset(profit->modpix, 0,
profit->modnaxisn[0]*profit->modnaxisn[1]*sizeof(double));
for (p=0; p<profit->nparam; p++)
profit->param[p] = param[p];
/* Simple PSF shortcut */
if (profit->nprof == 1 && profit->prof[0]->code == PROF_DIRAC)
profit_resample(profit, profit->psfpix, profit->lmodpix,
*profit->prof[0]->flux);
else
{
for (p=0; p<profit->nprof; p++)
prof_add(profit->prof[p], profit);
profit_convolve(profit, profit->modpix);
profit_resample(profit, profit->modpix, profit->lmodpix, 1.0);
}
profit_compresi(profit, dynparam, resi);
return resi;
}
/****** profit_compresi ******************************************************
PROTO double *prof_compresi(profitstruct *profit, double dynparam,
double *resi)
PURPOSE Compute the vector of residuals between the data and the galaxy
profile model.
INPUT Profile-fitting structure,
dynamic-compression parameter (0=no compression),
vector of residuals (output).
OUTPUT Vector of residuals.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 15/04/2009
double *profit_compresi(profitstruct *profit, double dynparam, double *resi)
error, x1c,x2,rmin;
PIXTYPE *objpix, *objweight, *lmodpix,
val,val2,wval, invsig;
/* Compute vector of residuals */
resit = resi;
objpix = profit->objpix;
objweight = profit->objweight;
lmodpix = profit->lmodpix;
error = 0.0;
x1c = (double)(profit->objnaxisn[0]/2);
rmin = profit->obj2->hl_radius / 2.0;
x2 = -(double)(profit->objnaxisn[1]/2);
npix = profit->objnaxisn[0]*profit->objnaxisn[1];
if (dynparam > 0.0)
invsig = (PIXTYPE)(1.0/dynparam);
for (i=npix; i--; lmodpix++)
{
val = *(objpix++);
if ((wval=*(objweight++))>0.0)
{
val2 = (val - *lmodpix)*wval*invsig;
val2 = val2>0.0? LOGF(1.0+val2) : -LOGF(1.0-val2);
profit->chi2 = dynparam*dynparam*error;
}
else
{
for (i=npix; i--; lmodpix++)
{
val = *(objpix++);
if ((wval=*(objweight++))>0.0)
{
val2 = (val - *lmodpix)*wval;
*(resit++) = val2;
error += val2*val2;
}
}
profit->chi2 = error;
}
return resi;
}
/****** profit_resample ******************************************************
PROTO void prof_resample(profitstruct *profit, double *inpix,
PIXTYPE *outpix)
PURPOSE Resample the current full resolution model to image resolution.
INPUT Profile-fitting structure.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 18/03/2009
void profit_resample(profitstruct *profit, double *inpix, PIXTYPE *outpix,
double factor)
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{
double posin[2], posout[2], dnaxisn[2],
*dx,*dy,
xcout,ycout, xcin,ycin, invpixstep, flux;
int d,i;
xcout = (double)(profit->objnaxisn[0]/2) + 1.0; /* FITS convention */
if ((dx=(profit->paramlist[PARAM_X])))
xcout += *dx;
ycout = (double)(profit->objnaxisn[1]/2) + 1.0; /* FITS convention */
if ((dy=(profit->paramlist[PARAM_Y])))
ycout += *dy;
xcin = (profit->modnaxisn[0]/2) + 1.0; /* FITS convention */
ycin = (profit->modnaxisn[1]/2) + 1.0; /* FITS convention */
invpixstep = 1.0/profit->pixstep;
/* Initialize multi-dimensional counters */
for (d=0; d<2; d++)
{
posout[d] = 1.0; /* FITS convention */
dnaxisn[d] = profit->objnaxisn[d]+0.5;
}
/* Remap each pixel */
flux = 0.0;
for (i=profit->objnaxisn[0]*profit->objnaxisn[1]; i--;)
{
posin[0] = (posout[0] - xcout)*invpixstep + xcin;
posin[1] = (posout[1] - ycout)*invpixstep + ycin;
flux += ((*(outpix++) = (PIXTYPE)(factor*interpolate_pix(posin, inpix,
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profit->modnaxisn, INTERP_LANCZOS3))));
for (d=0; d<2; d++)
if ((posout[d]+=1.0) < dnaxisn[d])
break;
else
posout[d] = 1.0;
}
profit->flux = flux;
return;
}
/****** profit_convolve *******************************************************
PROTO void profit_convolve(profitstruct *profit, double *modpix)
PURPOSE Convolve a model image with the local PSF.
INPUT Pointer to the profit structure,
Pointer to the image raster.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 15/09/2008
***/
void profit_convolve(profitstruct *profit, double *modpix)
{
if (!profit->psfdft)
profit_makedft(profit);
fft_conv(modpix, profit->psfdft, profit->modnaxisn);
return;
}
/****** profit_makedft *******************************************************
PROTO void profit_makedft(profitstruct *profit)
PURPOSE Create the Fourier transform of the descrambled PSF component.
INPUT Pointer to the profit structure.
OUTPUT -.
NOTES -.
AUTHOR E. Bertin (IAP)
VERSION 22/04/2008
***/
void profit_makedft(profitstruct *profit)
{
psfstruct *psf;
double *mask,*maskt, *ppix;
double dx,dy, r,r2,rmin,rmin2,rmax,rmax2,rsig,invrsig2;
int width,height,npix,offset, psfwidth,psfheight,psfnpix,
cpwidth, cpheight,hcpwidth,hcpheight, i,j,x,y;
if (!(psf=profit->psf))
return;
psfwidth = profit->modnaxisn[0];
psfheight = profit->modnaxisn[1];
psfnpix = psfwidth*psfheight;
width = profit->modnaxisn[0];
height = profit->modnaxisn[1];
npix = width*height;