profit.c 123 KB
Newer Older
1
2
/*
*				profit.c
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3
*
4
* Fit a range of galaxy models to an image.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
5
*
6
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
Emmanuel Bertin's avatar
Emmanuel Bertin committed
7
*
8
*	This file part of:	SExtractor
Emmanuel Bertin's avatar
Emmanuel Bertin committed
9
*
10
*	Copyright:		(C) 2006-2010 IAP/CNRS/UPMC
Emmanuel Bertin's avatar
Emmanuel Bertin committed
11
*
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
*	Author:			Emmanuel Bertin (IAP)
*
*	License:		GNU General Public License
*
*	SExtractor is free software: you can redistribute it and/or modify
*	it under the terms of the GNU General Public License as published by
*	the Free Software Foundation, either version 3 of the License, or
*	(at your option) any later version.
*	SExtractor is distributed in the hope that it will be useful,
*	but WITHOUT ANY WARRANTY; without even the implied warranty of
*	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
*	GNU General Public License for more details.
*	You should have received a copy of the GNU General Public License
*	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
*
*	Last modified:		11/10/2010
*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/
Emmanuel Bertin's avatar
Emmanuel Bertin committed
30
31
32
33
34

#ifdef HAVE_CONFIG_H
#include        "config.h"
#endif

35
36
37
38
#ifndef HAVE_MATHIMF_H
#define _GNU_SOURCE
#endif

39
#include	<math.h>
Emmanuel Bertin's avatar
Emmanuel Bertin committed
40
41
42
43
44
45
46
47
#include	<stdio.h>
#include	<stdlib.h>
#include	<string.h>

#include	"define.h"
#include	"globals.h"
#include	"prefs.h"
#include	"fits/fitscat.h"
48
#include	"levmar/levmar.h"
Emmanuel Bertin's avatar
Emmanuel Bertin committed
49
50
51
#include	"fft.h"
#include	"fitswcs.h"
#include	"check.h"
52
#include	"image.h"
Emmanuel Bertin's avatar
Emmanuel Bertin committed
53
54
55
56
#include	"pattern.h"
#include	"psf.h"
#include	"profit.h"

57
58
static double	prof_gammainc(double x, double a),
		prof_gamma(double x);
59
60
static float	prof_interpolate(profstruct *prof, float *posin);
static float	interpolate_pix(float *posin, float *pix, int *naxisn,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
61
62
		interpenum interptype);

63
static void	make_kernel(float pos, float *kernel, interpenum interptype);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
64
65
66

/*------------------------------- variables ---------------------------------*/

67
68
69
const char	profname[][32]={"background offset", "point source",
		"Sersic spheroid", "de Vaucouleurs spheroid",
		"exponential disk", "spiral arms",
Emmanuel Bertin's avatar
Emmanuel Bertin committed
70
71
72
		"bar", "inner ring", "outer ring", "tabulated model",
		""};

Emmanuel Bertin's avatar
Emmanuel Bertin committed
73
74
const int	interp_kernwidth[5]={1,2,4,6,8};

75
76
const int	flux_flag[PARAM_NPARAM] = {0,
					1,0,0,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
77
78
79
80
81
82
83
84
					1,0,0,0,0,
					1,0,0,0,
					1,0,0,0,0,0,0,0,
					1,0,0,
					1,0,0,
					1,0,0
					};

Emmanuel Bertin's avatar
Emmanuel Bertin committed
85
86
87
88
89
90
91
92
93
94
95
96
97
int theniter, the_gal;
/* "Local" global variables; it seems dirty but it simplifies a lot */
/* interfacing to the LM routines */
static picstruct	*the_field, *the_wfield;
profitstruct		*theprofit;

/****** profit_init ***********************************************************
PROTO	profitstruct profit_init(psfstruct *psf)
PURPOSE	Allocate and initialize a new profile-fitting structure.
INPUT	Pointer to PSF structure.
OUTPUT	A pointer to an allocated profit structure.
NOTES	-.
AUTHOR	E. Bertin (IAP)
98
VERSION	08/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
99
100
101
102
103
 ***/
profitstruct	*profit_init(psfstruct *psf)
  {
   profitstruct		*profit;
   int			p, nprof,
104
105
			backflag, diracflag, spheroidflag, diskflag,
			barflag, armsflag;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
106
107
108
109
110
111
112

  QCALLOC(profit, profitstruct, 1);
  profit->psf = psf;
  profit->psfdft = NULL;

  profit->nparam = 0;
  QMALLOC(profit->prof, profstruct *, PROF_NPROF);
113
  backflag = diracflag = spheroidflag = diskflag = barflag = armsflag = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
114
115
116
117
118
119
120
121
  nprof = 0;
  for (p=0; p<PROF_NPROF; p++)
    if (!backflag && FLAG(obj2.prof_offset_flux))
      {
      profit->prof[p] = prof_init(profit, PROF_BACK);
      backflag = 1;
      nprof++;
      }
122
123
124
125
126
127
    else if (!diracflag && FLAG(obj2.prof_dirac_flux))
      {
      profit->prof[p] = prof_init(profit, PROF_DIRAC);
      diracflag = 1;
      nprof++;
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
    else if (!spheroidflag && FLAG(obj2.prof_spheroid_flux))
      {
      profit->prof[p] = prof_init(profit,
	FLAG(obj2.prof_spheroid_sersicn)? PROF_SERSIC : PROF_DEVAUCOULEURS);
      spheroidflag = 1;
      nprof++;
      }
    else if (!diskflag && FLAG(obj2.prof_disk_flux))
      {
      profit->prof[p] = prof_init(profit, PROF_EXPONENTIAL);
      diskflag = 1;
      nprof++;
      }
    else if (diskflag && !barflag && FLAG(obj2.prof_bar_flux))
      {
      profit->prof[p] = prof_init(profit, PROF_BAR);
      barflag = 1;
      nprof++;
      }
    else if (barflag && !armsflag && FLAG(obj2.prof_arms_flux))
      {
      profit->prof[p] = prof_init(profit, PROF_ARMS);
      armsflag = 1;
      nprof++;
      }

154
155
156
157
158
159
160
161
162
163
/* Allocate memory for the complete model */
  QMALLOC16(profit->modpix, float, PROFIT_MAXMODSIZE*PROFIT_MAXMODSIZE);
  QMALLOC16(profit->modpix2, float, PROFIT_MAXMODSIZE*PROFIT_MAXMODSIZE);
  QMALLOC16(profit->cmodpix, float, PROFIT_MAXMODSIZE*PROFIT_MAXMODSIZE);
  QMALLOC16(profit->psfpix, float, PROFIT_MAXMODSIZE*PROFIT_MAXMODSIZE);
  QMALLOC16(profit->objpix, PIXTYPE, PROFIT_MAXOBJSIZE*PROFIT_MAXOBJSIZE);
  QMALLOC16(profit->objweight, PIXTYPE, PROFIT_MAXOBJSIZE*PROFIT_MAXOBJSIZE);
  QMALLOC16(profit->lmodpix, PIXTYPE, PROFIT_MAXOBJSIZE*PROFIT_MAXOBJSIZE);
  QMALLOC16(profit->lmodpix2, PIXTYPE, PROFIT_MAXOBJSIZE*PROFIT_MAXOBJSIZE);
  QMALLOC16(profit->resi, float, PROFIT_MAXOBJSIZE*PROFIT_MAXOBJSIZE);
164
  QMALLOC16(profit->covar, float, profit->nparam*profit->nparam);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
165
  profit->nprof = nprof;
166
  profit->oversamp = PROFIT_OVERSAMP;
167
  profit->fluxfac = 1.0;	/* Default */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
168
169
170
171
172
173
174
175
176
177
178
179

  return profit;
  }  


/****** profit_end ************************************************************
PROTO	void prof_end(profstruct *prof)
PURPOSE	End (deallocate) a profile-fitting structure.
INPUT	Prof structure.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
180
VERSION	06/04/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
181
182
183
184
185
186
187
 ***/
void	profit_end(profitstruct *profit)
  {
   int	p;

  for (p=0; p<profit->nprof; p++)
    prof_end(profit->prof[p]);
188
189
190
191
192
193
194
195
196
  free(profit->modpix);
  free(profit->modpix2);
  free(profit->cmodpix);
  free(profit->psfpix);
  free(profit->lmodpix);
  free(profit->lmodpix2);
  free(profit->objpix);
  free(profit->objweight);
  free(profit->resi);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
  free(profit->prof);
  free(profit->covar);
  free(profit->psfdft);
  free(profit);

  return;
  }


/****** profit_fit ************************************************************
PROTO	void profit_fit(profitstruct *profit, picstruct *field,
		picstruct *wfield, objstruct *obj, obj2struct *obj2)
PURPOSE	Fit profile(s) convolved with the PSF to a detected object.
INPUT	Array of profile structures,
	Number of profiles,
	Pointer to the profile-fitting structure,
	Pointer to the field,
	Pointer to the field weight,
	Pointer to the obj.
OUTPUT	Pointer to an allocated fit structure (containing details about the
	fit).
NOTES	It is a modified version of the lm_minimize() of lmfit.
AUTHOR	E. Bertin (IAP)
220
VERSION	07/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
221
222
223
224
225
 ***/
void	profit_fit(profitstruct *profit,
		picstruct *field, picstruct *wfield,
		objstruct *obj, obj2struct *obj2)
  {
226
    profitstruct	pprofit;
227
    patternstruct	*pattern;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
228
229
    psfstruct		*psf;
    checkstruct		*check;
230
    double		emx2,emy2,emxy, a , cp,sp, cn, bn, n;
231
232
233
    float		param0[PARAM_NPARAM], param1[PARAM_NPARAM],
			param[PARAM_NPARAM],
			**list,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
234
			*cov,
235
			psf_fwhm, dchi2, err, aspect, chi2;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
236
237
    int			*index,
			i,j,p, nparam, nparam2, ncomp, nprof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
238
239

  nparam = profit->nparam;
240
  nparam2 = nparam*nparam;
241
  nprof = profit->nprof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
242
243
244
245
246
247
248
  if (profit->psfdft)
    {
    QFREE(profit->psfdft);
    }

  psf = profit->psf;
  profit->pixstep = psf->pixstep;
249
  obj2->prof_flag = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
250
251

/* Create pixmaps at image resolution */
252
253
  profit->ix = (int)(obj->mx + 0.49999);/* internal convention: 1st pix = 0 */
  profit->iy = (int)(obj->my + 0.49999);/* internal convention: 1st pix = 0 */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
254
  psf_fwhm = psf->masksize[0]*psf->pixstep;
255
  profit->objnaxisn[0] = (((int)((obj->xmax-obj->xmin+1) + psf_fwhm + 0.499)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
256
		*1.2)/2)*2 + 1;
257
  profit->objnaxisn[1] = (((int)((obj->ymax-obj->ymin+1) + psf_fwhm + 0.499)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
258
259
260
261
262
		*1.2)/2)*2 + 1;
  if (profit->objnaxisn[1]<profit->objnaxisn[0])
    profit->objnaxisn[1] = profit->objnaxisn[0];
  else
    profit->objnaxisn[0] = profit->objnaxisn[1];
263
264
  if (profit->objnaxisn[0]>PROFIT_MAXOBJSIZE)
    {
265
266
    profit->subsamp = ceil((float)profit->objnaxisn[0]/PROFIT_MAXOBJSIZE);
    profit->objnaxisn[1] = (profit->objnaxisn[0] /= (int)profit->subsamp);
267
268
269
    obj2->prof_flag |= PROFLAG_OBJSUB;
    }
  else
270
    profit->subsamp = 1.0;
271
  profit->nobjpix = profit->objnaxisn[0]*profit->objnaxisn[1];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
272
273
274
275
276
277
278
279
280

/* Use (dirty) global variables to interface with lmfit */
  the_field = field;
  the_wfield = wfield;
  theprofit = profit;
  profit->obj = obj;
  profit->obj2 = obj2;

  profit->nresi = profit_copyobjpix(profit, field, wfield);
281
/* Check if the number of constraints exceeds the number of free parameters */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
282
283
  if (profit->nresi < nparam)
    {
284
285
286
    if (FLAG(obj2.prof_vector))
      for (p=0; p<nparam; p++)
        obj2->prof_vector[p] = 0.0;
287
288
289
290
291
292
    if (FLAG(obj2.prof_errvector))
      for (p=0; p<nparam; p++)
        obj2->prof_errvector[p] = 0.0;
    if (FLAG(obj2.prof_errmatrix))
      for (p=0; p<nparam2; p++)
        obj2->prof_errmatrix[p] = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
293
    obj2->prof_niter = 0;
294
    obj2->prof_flag |= PROFLAG_NOTCONST;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
295
296
297
298
299
    return;
    }

/* Create pixmap at PSF resolution */
  profit->modnaxisn[0] =
300
301
	((int)(profit->objnaxisn[0]*profit->subsamp/profit->pixstep
		+0.4999)/2+1)*2; 
Emmanuel Bertin's avatar
Emmanuel Bertin committed
302
  profit->modnaxisn[1] =
303
304
	((int)(profit->objnaxisn[1]*profit->subsamp/profit->pixstep
		+0.4999)/2+1)*2; 
Emmanuel Bertin's avatar
Emmanuel Bertin committed
305
306
307
308
  if (profit->modnaxisn[1] < profit->modnaxisn[0])
    profit->modnaxisn[1] = profit->modnaxisn[0];
  else
    profit->modnaxisn[0] = profit->modnaxisn[1];
309
310
311
312
313
314
  if (profit->modnaxisn[0]>PROFIT_MAXMODSIZE)
    {
    profit->pixstep = (double)profit->modnaxisn[0] / PROFIT_MAXMODSIZE;
    profit->modnaxisn[0] = profit->modnaxisn[1] = PROFIT_MAXMODSIZE;
    obj2->prof_flag |= PROFLAG_MODSUB;
    }
315
  profit->nmodpix = profit->modnaxisn[0]*profit->modnaxisn[1];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
316
317
318
319
320
321
322
323
324
325

/* Compute the local PSF */
  profit_psf(profit);

/* Set initial guesses and boundaries */
  profit->sigma = obj->sigbkg;

  profit_resetparams(profit);

/* Actual minimisation */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
326
  fft_reset();
327
the_gal++;
328
329
330
331
  for (p=0; p<profit->nparam; p++)
    profit->freeparam_flag[p] = 1;
  profit->nfreeparam = profit->nparam;

Emmanuel Bertin's avatar
Emmanuel Bertin committed
332
  profit->niter = profit_minimize(profit, PROFIT_MAXITER);
333
334
335
336
337
338
339
340
/*
  chi2 = profit->chi2;
  for (p=0; p<nparam; p++)
    param1[p] = profit->paraminit[p];
  profit_resetparams(profit);
  for (p=0; p<nparam; p++)
    profit->paraminit[p] = param1[p] + (profit->paraminit[p]<param1[p]?1.0:-1.0)
			* sqrt(profit->covar[p*(nparam+1)]);
341

342
343
344
345
346
347
348
349
350
351
352
353
354
  profit->niter = profit_minimize(profit, PROFIT_MAXITER);
  if (chi2<profit->chi2)
    for (p=0; p<nparam; p++)
      profit->paraminit[p] = param1[p];

list = profit->paramlist;
index = profit->paramindex;
for (i=0; i<PARAM_NPARAM; i++)
if (list[i] && i!= PARAM_SPHEROID_ASPECT && i!=PARAM_SPHEROID_POSANG)
profit->freeparam_flag[index[i]] = 0;
profit->nfreeparam = 2;
profit->niter = profit_minimize(profit, PROFIT_MAXITER);
*/
Emmanuel Bertin's avatar
Emmanuel Bertin committed
355
356
357
358
  for (p=0; p<nparam; p++)
    profit->paramerr[p]= sqrt(profit->covar[p*(nparam+1)]);

/* CHECK-Images */
359
360
361
362
363
364
  if ((check = prefs.check[CHECK_PROFILES]))
    {
    profit_residuals(profit,field,wfield, 0.0, profit->paraminit, NULL);
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, 1.0);
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
365
366
  if ((check = prefs.check[CHECK_SUBPROFILES]))
    {
367
    profit_residuals(profit,field,wfield, 0.0, profit->paraminit, NULL);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
368
369
370
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, -1.0);
    }
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
  if ((check = prefs.check[CHECK_SPHEROIDS]))
    {
/*-- Set to 0 flux components that do not belong to spheroids */
    for (p=0; p<profit->nparam; p++)
      param[p] = profit->paraminit[p];
    list = profit->paramlist;
    index = profit->paramindex;
    for (i=0; i<PARAM_NPARAM; i++)
      if (list[i] && flux_flag[i] && i!= PARAM_SPHEROID_FLUX)
        param[index[i]] = 0.0;
    profit_residuals(profit,field,wfield, 0.0, param, NULL);
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, 1.0);
    }
  if ((check = prefs.check[CHECK_SUBSPHEROIDS]))
    {
/*-- Set to 0 flux components that do not belong to spheroids */
    for (p=0; p<profit->nparam; p++)
      param[p] = profit->paraminit[p];
    list = profit->paramlist;
    index = profit->paramindex;
    for (i=0; i<PARAM_NPARAM; i++)
      if (list[i] && flux_flag[i] && i!= PARAM_SPHEROID_FLUX)
        param[index[i]] = 0.0;
    profit_residuals(profit,field,wfield, 0.0, param, NULL);
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, -1.0);
    }
  if ((check = prefs.check[CHECK_DISKS]))
Emmanuel Bertin's avatar
Emmanuel Bertin committed
400
    {
401
402
403
404
405
406
407
408
409
/*-- Set to 0 flux components that do not belong to disks */
    for (p=0; p<profit->nparam; p++)
      param[p] = profit->paraminit[p];
    list = profit->paramlist;
    index = profit->paramindex;
    for (i=0; i<PARAM_NPARAM; i++)
      if (list[i] && flux_flag[i] && i!= PARAM_DISK_FLUX)
        param[index[i]] = 0.0;
    profit_residuals(profit,field,wfield, 0.0, param, NULL);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
410
411
412
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, 1.0);
    }
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
  if ((check = prefs.check[CHECK_SUBDISKS]))
    {
/*-- Set to 0 flux components that do not belong to disks */
    for (p=0; p<profit->nparam; p++)
      param[p] = profit->paraminit[p];
    list = profit->paramlist;
    index = profit->paramindex;
    for (i=0; i<PARAM_NPARAM; i++)
      if (list[i] && flux_flag[i] && i!= PARAM_DISK_FLUX)
        param[index[i]] = 0.0;
    profit_residuals(profit,field,wfield, 0.0, param, NULL);
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, -1.0);
    }

/* Compute compressed residuals */
  profit_residuals(profit,field,wfield, 10.0, profit->paraminit,profit->resi);
430

Emmanuel Bertin's avatar
Emmanuel Bertin committed
431
432
433
434
/* Fill measurement parameters */
  if (FLAG(obj2.prof_vector))
    {
    for (p=0; p<nparam; p++)
435
      obj2->prof_vector[p]= profit->paraminit[p];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
436
437
438
439
440
441
    }
  if (FLAG(obj2.prof_errvector))
    {
    for (p=0; p<nparam; p++)
      obj2->prof_errvector[p]= profit->paramerr[p];
    }
442
443
444
445
446
  if (FLAG(obj2.prof_errmatrix))
    {
    for (p=0; p<nparam2; p++)
      obj2->prof_errmatrix[p]= profit->covar[p];
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
447
448
449

  obj2->prof_niter = profit->niter;
  obj2->flux_prof = profit->flux;
450
451
452
  if (FLAG(obj2.fluxerr_prof))
    {
    err = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
453
454
455
456
457
458
459
460
461
462
463
    cov = profit->covar;
    index = profit->paramindex;
    list = profit->paramlist;
    for (i=0; i<PARAM_NPARAM; i++)
      if (flux_flag[i] && list[i])
        {
        cov = profit->covar + nparam*index[i];
        for (j=0; j<PARAM_NPARAM; j++)
          if (flux_flag[j] && list[j])
            err += cov[index[j]];
        }
464
465
466
    obj2->fluxerr_prof = err>0.0? sqrt(err): 0.0;
    }

467
468
469
  obj2->prof_chi2 = (profit->nresi > profit->nparam)?
		profit->chi2 / (profit->nresi - profit->nparam) : 0.0;

Emmanuel Bertin's avatar
Emmanuel Bertin committed
470
471
472
473
474
  if (FLAG(obj2.x_prof))
    {
    i = profit->paramindex[PARAM_X];
    j = profit->paramindex[PARAM_Y];
/*-- Model coordinates follow the FITS convention (first pixel at 1,1) */
475
476
    if (profit->paramlist[PARAM_X])
      {
477
      obj2->x_prof = (double)profit->ix + *profit->paramlist[PARAM_X] + 1.0;
478
479
480
481
482
483
      obj2->poserrmx2_prof = emx2 = profit->covar[i*(nparam+1)];
      }
    else
      emx2 = 0.0;
    if (profit->paramlist[PARAM_Y])
      {
484
      obj2->y_prof = (double)profit->iy + *profit->paramlist[PARAM_Y] + 1.0;
485
486
487
488
489
490
491
492
      obj2->poserrmy2_prof = emy2 = profit->covar[j*(nparam+1)];
      }
    else
      emy2 = 0.0;
    if (profit->paramlist[PARAM_X] && profit->paramlist[PARAM_Y])
      obj2->poserrmxy_prof = emxy = profit->covar[i+j*nparam];
    else
      emxy = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510

/*-- Error ellipse parameters */
    if (FLAG(obj2.poserra_prof))
      {
       double	pmx2,pmy2,temp,theta;

      if (fabs(temp=emx2-emy2) > 0.0)
        theta = atan2(2.0 * emxy,temp) / 2.0;
      else
        theta = PI/4.0;

      temp = sqrt(0.25*temp*temp+ emxy*emxy);
      pmy2 = pmx2 = 0.5*(emx2+emy2);
      pmx2+=temp;
      pmy2-=temp;

      obj2->poserra_prof = (float)sqrt(pmx2);
      obj2->poserrb_prof = (float)sqrt(pmy2);
511
      obj2->poserrtheta_prof = (float)(theta/DEG);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
512
513
514
515
516
517
518
519
520
521
522
523
      }

    if (FLAG(obj2.poserrcxx_prof))
      {
       double	temp;

      obj2->poserrcxx_prof = (float)(emy2/(temp=emx2*emy2-emxy*emxy));
      obj2->poserrcyy_prof = (float)(emx2/temp);
      obj2->poserrcxy_prof = (float)(-2*emxy/temp);
      }
    }

524
525
  if (FLAG(obj2.prof_mx2))
    profit_moments(profit, obj2);
526

527
528
529
/* Do measurements on the rasterised model (surface brightnesses) */
  if (FLAG(obj2.peak_prof))
    profit_surface(profit, obj2); 
Emmanuel Bertin's avatar
Emmanuel Bertin committed
530

531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
/* Background offset */
  if (FLAG(obj2.prof_offset_flux))
    {
    obj2->prof_offset_flux = *profit->paramlist[PARAM_BACK];
    obj2->prof_offset_fluxerr=profit->paramerr[profit->paramindex[PARAM_BACK]];
    }

/* Point source */
  if (FLAG(obj2.prof_dirac_flux))
    {
    obj2->prof_dirac_flux = *profit->paramlist[PARAM_DIRAC_FLUX];
    obj2->prof_dirac_fluxerr =
		profit->paramerr[profit->paramindex[PARAM_DIRAC_FLUX]];
    }

546
/* Spheroid */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
547
548
  if (FLAG(obj2.prof_spheroid_flux))
    {
549
550
551
552
553
554
555
556
557
    if ((aspect = *profit->paramlist[PARAM_SPHEROID_ASPECT]) > 1.0)
      {
      *profit->paramlist[PARAM_SPHEROID_REFF] *= aspect;
      profit->paramerr[profit->paramindex[PARAM_SPHEROID_REFF]] *= aspect;
      profit->paramerr[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			/= (aspect*aspect);
      *profit->paramlist[PARAM_SPHEROID_ASPECT] = 1.0 / aspect;
      *profit->paramlist[PARAM_SPHEROID_POSANG] += 90.0;
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
    obj2->prof_spheroid_flux = *profit->paramlist[PARAM_SPHEROID_FLUX];
    obj2->prof_spheroid_fluxerr =
		profit->paramerr[profit->paramindex[PARAM_SPHEROID_FLUX]];
    obj2->prof_spheroid_reff = *profit->paramlist[PARAM_SPHEROID_REFF];
    obj2->prof_spheroid_refferr = 
		profit->paramerr[profit->paramindex[PARAM_SPHEROID_REFF]];
    obj2->prof_spheroid_aspect = *profit->paramlist[PARAM_SPHEROID_ASPECT];
    obj2->prof_spheroid_aspecterr = 
		profit->paramerr[profit->paramindex[PARAM_SPHEROID_ASPECT]];
    obj2->prof_spheroid_theta =
			fmod_m90_p90(*profit->paramlist[PARAM_SPHEROID_POSANG]);
    obj2->prof_spheroid_thetaerr = 
		profit->paramerr[profit->paramindex[PARAM_SPHEROID_POSANG]];
    if (FLAG(obj2.prof_spheroid_sersicn))
      {
      obj2->prof_spheroid_sersicn = *profit->paramlist[PARAM_SPHEROID_SERSICN];
      obj2->prof_spheroid_sersicnerr = 
		profit->paramerr[profit->paramindex[PARAM_SPHEROID_SERSICN]];
      }
577
578
579
580
581
    else
      obj2->prof_spheroid_sersicn = 4.0;
    if (FLAG(obj2.prof_spheroid_peak))
      {
      n = obj2->prof_spheroid_sersicn;
582
      bn = 2.0*n - 1.0/3.0 + 4.0/(405.0*n) + 46.0/(25515.0*n*n)
583
		+ 131.0/(1148175*n*n*n);	/* Ciotti & Bertin 1999 */
584
      cn = n * prof_gamma(2.0*n) * pow(bn, -2.0*n);
585
      obj2->prof_spheroid_peak = obj2->prof_spheroid_reff>0.0?
586
587
	obj2->prof_spheroid_flux * profit->pixstep*profit->pixstep
		/ (2.0 * PI * cn
588
		* obj2->prof_spheroid_reff*obj2->prof_spheroid_reff
589
		* obj2->prof_spheroid_aspect)
590
591
	: 0.0;
      if (FLAG(obj2.prof_spheroid_fluxeff))
592
593
594
        obj2->prof_spheroid_fluxeff = obj2->prof_spheroid_peak * exp(-bn);
      if (FLAG(obj2.prof_spheroid_fluxmean))
        obj2->prof_spheroid_fluxmean = obj2->prof_spheroid_peak * cn;
595
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
596
597
598
599
600
    }

/* Disk */
  if (FLAG(obj2.prof_disk_flux))
    {
601
602
603
604
605
606
607
608
609
    if ((aspect = *profit->paramlist[PARAM_DISK_ASPECT]) > 1.0)
      {
      *profit->paramlist[PARAM_DISK_SCALE] *= aspect;
      profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]] *= aspect;
      profit->paramerr[profit->paramindex[PARAM_DISK_ASPECT]]
			/= (aspect*aspect);
      *profit->paramlist[PARAM_DISK_ASPECT] = 1.0 / aspect;
      *profit->paramlist[PARAM_DISK_POSANG] += 90.0;
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
    obj2->prof_disk_flux = *profit->paramlist[PARAM_DISK_FLUX];
    obj2->prof_disk_fluxerr =
		profit->paramerr[profit->paramindex[PARAM_DISK_FLUX]];
    obj2->prof_disk_scale = *profit->paramlist[PARAM_DISK_SCALE];
    obj2->prof_disk_scaleerr =
		profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]];
    obj2->prof_disk_aspect = *profit->paramlist[PARAM_DISK_ASPECT];
    obj2->prof_disk_aspecterr =
		profit->paramerr[profit->paramindex[PARAM_DISK_ASPECT]];
    obj2->prof_disk_theta = fmod_m90_p90(*profit->paramlist[PARAM_DISK_POSANG]);
    obj2->prof_disk_thetaerr =
		profit->paramerr[profit->paramindex[PARAM_DISK_POSANG]];
    if (FLAG(obj2.prof_disk_inclination))
      {
      obj2->prof_disk_inclination = acos(obj2->prof_disk_aspect) / DEG;
      if (FLAG(obj2.prof_disk_inclinationerr))
        {
        a = sqrt(1.0-obj2->prof_disk_aspect*obj2->prof_disk_aspect);
        obj2->prof_disk_inclinationerr = obj2->prof_disk_aspecterr
					/(a>0.1? a : 0.1)/DEG;
        }
      }

633
634
635
    if (FLAG(obj2.prof_disk_peak))
      {
      obj2->prof_disk_peak = obj2->prof_disk_scale>0.0?
636
	obj2->prof_disk_flux * profit->pixstep*profit->pixstep
637
638
639
640
	/ (2.0 * PI * obj2->prof_disk_scale*obj2->prof_disk_scale
		* obj2->prof_disk_aspect)
	: 0.0;
      if (FLAG(obj2.prof_disk_fluxeff))
641
642
643
        obj2->prof_disk_fluxeff = obj2->prof_disk_peak * 0.186682; /* e^-(b_n)*/
      if (FLAG(obj2.prof_disk_fluxmean))
        obj2->prof_disk_fluxmean = obj2->prof_disk_peak * 0.355007;/* b_n^(-2)*/
644
645
      }

Emmanuel Bertin's avatar
Emmanuel Bertin committed
646
647
648
/* Disk pattern */
    if (prefs.pattern_flag)
      {
649
      profit_residuals(profit,field,wfield, PROFIT_DYNPARAM,
650
			profit->paraminit,profit->resi);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
      pattern = pattern_init(profit, prefs.pattern_type,
		prefs.prof_disk_patternncomp);
      pattern_fit(pattern, profit);
      if (FLAG(obj2.prof_disk_patternspiral))
        obj2->prof_disk_patternspiral = pattern_spiral(pattern);
      if (FLAG(obj2.prof_disk_patternvector))
        {
        ncomp = pattern->size[2];
        for (p=0; p<ncomp; p++)
          obj2->prof_disk_patternvector[p] = (float)pattern->coeff[p];
        }
      if (FLAG(obj2.prof_disk_patternmodvector))
        {
        ncomp = pattern->ncomp*pattern->nfreq;
        for (p=0; p<ncomp; p++)
          obj2->prof_disk_patternmodvector[p] = (float)pattern->mcoeff[p];
        }
      if (FLAG(obj2.prof_disk_patternargvector))
        {
        ncomp = pattern->ncomp*pattern->nfreq;
        for (p=0; p<ncomp; p++)
          obj2->prof_disk_patternargvector[p] = (float)pattern->acoeff[p];
        }
      pattern_end(pattern);
      }

/* Bar */
    if (FLAG(obj2.prof_bar_flux))
      {
      obj2->prof_bar_flux = *profit->paramlist[PARAM_BAR_FLUX];
      obj2->prof_bar_fluxerr =
		profit->paramerr[profit->paramindex[PARAM_BAR_FLUX]];
      obj2->prof_bar_length = *profit->paramlist[PARAM_ARMS_START]
				**profit->paramlist[PARAM_DISK_SCALE];
      obj2->prof_bar_lengtherr = *profit->paramlist[PARAM_ARMS_START]
		  * profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]]
		+ *profit->paramlist[PARAM_DISK_SCALE]
		  * profit->paramerr[profit->paramindex[PARAM_ARMS_START]];
      obj2->prof_bar_aspect = *profit->paramlist[PARAM_BAR_ASPECT];
      obj2->prof_bar_aspecterr =
		profit->paramerr[profit->paramindex[PARAM_BAR_ASPECT]];
      obj2->prof_bar_posang = 
			fmod_m90_p90(*profit->paramlist[PARAM_ARMS_POSANG]);
      obj2->prof_bar_posangerr =
		profit->paramerr[profit->paramindex[PARAM_ARMS_POSANG]];
      if (FLAG(obj2.prof_bar_theta))
        {
        cp = cos(obj2->prof_bar_posang*DEG);
        sp = sin(obj2->prof_bar_posang*DEG);
        a = obj2->prof_disk_aspect;
        obj2->prof_bar_theta = fmod_m90_p90(atan2(a*sp,cp)/DEG
				+ obj2->prof_disk_theta);
        obj2->prof_bar_thetaerr = obj2->prof_bar_posangerr*a/(cp*cp+a*a*sp*sp);
        }

/* Arms */
      if (FLAG(obj2.prof_arms_flux))
        {
        obj2->prof_arms_flux = *profit->paramlist[PARAM_ARMS_FLUX];
        obj2->prof_arms_fluxerr =
		profit->paramerr[profit->paramindex[PARAM_ARMS_FLUX]];
        obj2->prof_arms_pitch =
		fmod_m90_p90(*profit->paramlist[PARAM_ARMS_PITCH]);
        obj2->prof_arms_pitcherr =
		profit->paramerr[profit->paramindex[PARAM_ARMS_PITCH]];
        obj2->prof_arms_start = *profit->paramlist[PARAM_ARMS_START]
				**profit->paramlist[PARAM_DISK_SCALE];
        obj2->prof_arms_starterr = *profit->paramlist[PARAM_ARMS_START]
		  * profit->paramerr[profit->paramindex[PARAM_DISK_SCALE]]
		+ *profit->paramlist[PARAM_DISK_SCALE]
		  * profit->paramerr[profit->paramindex[PARAM_ARMS_START]];
        obj2->prof_arms_quadfrac = *profit->paramlist[PARAM_ARMS_QUADFRAC];
        obj2->prof_arms_quadfracerr =
		profit->paramerr[profit->paramindex[PARAM_ARMS_QUADFRAC]];
        obj2->prof_arms_posang =
			fmod_m90_p90(*profit->paramlist[PARAM_ARMS_POSANG]);
        obj2->prof_arms_posangerr =
		profit->paramerr[profit->paramindex[PARAM_ARMS_POSANG]];
        }
      }
    }

733
/* Star/galaxy classification */
734
  if (FLAG(obj2.prof_class_star) || FLAG(obj2.prof_concentration))
735
736
737
    {
    pprofit = *profit;
    memset(pprofit.paramindex, 0, PARAM_NPARAM*sizeof(int));
738
    memset(pprofit.paramlist, 0, PARAM_NPARAM*sizeof(float *));
739
740
741
    pprofit.nparam = 0;
    QMALLOC(pprofit.prof, profstruct *, 1);
    pprofit.prof[0] = prof_init(&pprofit, PROF_DIRAC);
742
    QMALLOC16(pprofit.covar, float, pprofit.nparam*pprofit.nparam);
743
744
745
746
747
748
749
    pprofit.nprof = 1;
    profit_resetparams(&pprofit);
    if (profit->paramlist[PARAM_X] && profit->paramlist[PARAM_Y])
      {
      pprofit.paraminit[pprofit.paramindex[PARAM_X]] = *profit->paramlist[PARAM_X];
      pprofit.paraminit[pprofit.paramindex[PARAM_Y]] = *profit->paramlist[PARAM_Y];
      }
750
    pprofit.paraminit[pprofit.paramindex[PARAM_DIRAC_FLUX]] = profit->flux;
751
752
753
    for (p=0; p<pprofit.nparam; p++)
      pprofit.freeparam_flag[p] = 1;
    pprofit.nfreeparam = pprofit.nparam;
754
    pprofit.niter = profit_minimize(&pprofit, PROFIT_MAXITER);
755
    profit_residuals(&pprofit,field,wfield, PROFIT_DYNPARAM, pprofit.paraminit,
756
			pprofit.resi);
757
758
759
760
    if (FLAG(obj2.prof_class_star))
      {
      dchi2 = 0.5*(pprofit.chi2 - profit->chi2);
      obj2->prof_class_star = dchi2 < 50.0?
761
	(dchi2 > -50.0? 2.0/(1.0+expf(dchi2)) : 2.0) : 0.0;
762
763
764
765
766
767
768
769
770
      }
    if (FLAG(obj2.prof_concentration))
      {
      if (profit->flux > 0.0 && pprofit.flux > 0.0)
        obj2->prof_concentration = -2.5*log10(pprofit.flux / profit->flux);
      else  if (profit->flux > 0.0)
        obj2->prof_concentration = 99.0;
      else  if (pprofit.flux > 0.0)
        obj2->prof_concentration = -99.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
771
772
773
      if (FLAG(obj2.prof_concentrationerr))
        obj2->prof_concentrationerr = (obj2->flux_prof > 0.0?
		1.086*(obj2->fluxerr_prof / obj2->flux_prof) : 99.0);
774
      }
775
776
777
778
779
    prof_end(pprofit.prof[0]);
    free(pprofit.prof);
    free(pprofit.covar);
    }

Emmanuel Bertin's avatar
Emmanuel Bertin committed
780
/* clean up. */
781
  fft_reset();
782

Emmanuel Bertin's avatar
Emmanuel Bertin committed
783
784
785
  return;
  }

786
787
788

/****i* prof_gammainc *********************************************************
PROTO	double prof_gammainc(double x, double a)
789
790
PURPOSE	Returns the incomplete Gamma function (based on algorithm described in
	Numerical Recipes in C, chap. 6.1).
791
792
793
794
795
INPUT	A double,
	upper integration limit.
OUTPUT	Incomplete Gamma function.
NOTES	-.
AUTHOR	E. Bertin (IAP)
796
VERSION	08/10/2010
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
*/
static double	prof_gammainc (double x, double a)

  {
   double	b,c,d,h, xn,xp, del,sum;
   int		i;

  if (a < 0.0 || x <= 0.0)
    return 0.0;

  if (a < (x+1.0))
    {
/*-- Use the series representation */
    xp = x;
    del = sum = 1.0/x;
    for (i=100;i--;)	/* Iterate to convergence */
      {
      sum += (del *= a/(++xp));
      if (fabs(del) < fabs(sum)*3e-7)
        return sum*exp(-a+x*log(a)) / prof_gamma(x);
      }
    }
  else
    {
/*-- Use the continued fraction representation and take its complement */
    b = a + 1.0 - x;
    c = 1e30;
    h = d = 1.0/b;
    for (i=1; i<=100; i++)	/* Iterate to convergence */
      {
      xn = -i*(i-x);
      b += 2.0;
      if (fabs(d=xn*d+b) < 1e-30)
        d = 1e-30;
      if (fabs(c=b+xn/c) < 1e-30)
        c = 1e-30;
      del= c * (d = 1.0/d);
      h *= del;
      if (fabs(del-1.0) < 3e-7)
        return 1.0 - exp(-a+x*log(a))*h / prof_gamma(x);
      }
    }
  error(EXIT_FAILURE, "*Error*: out of bounds in ",
		"prof_gammainc()");
  return 0.0;
  }


845
/****i* prof_gamma ************************************************************
846
PROTO	double prof_gamma(double xx)
847
848
PURPOSE	Returns the Gamma function (based on algorithm described in Numerical
	Recipes in C, chap 6.1).
849
850
851
852
INPUT	A double.
OUTPUT	Gamma function.
NOTES	-.
AUTHOR	E. Bertin (IAP)
853
VERSION	11/09/2009
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
*/
static double	prof_gamma(double xx)

  {
   double		x,tmp,ser;
   static double	cof[6]={76.18009173,-86.50532033,24.01409822,
			-1.231739516,0.120858003e-2,-0.536382e-5};
   int			j;

  tmp=(x=xx-1.0)+5.5;
  tmp -= (x+0.5)*log(tmp);
  ser=1.0;
  for (j=0;j<6;j++)
    ser += cof[j]/(x+=1.0);

  return 2.50662827465*ser*exp(-tmp);
  }

Emmanuel Bertin's avatar
Emmanuel Bertin committed
872

873
874
875
876
877
878
879
880
881
/****** profit_minradius ******************************************************
PROTO	float profit_minradius(profitstruct *profit, float refffac)
PURPOSE	Returns the minimum disk radius that guarantees that each and
	every model component fits within some margin in that disk.
INPUT	Profit structure pointer,
	margin in units of (r/r_eff)^(1/n)).
OUTPUT	Radius (in pixels).
NOTES	-.
AUTHOR	E. Bertin (IAP)
882
VERSION	08/10/2010
883
884
885
886
887
888
889
890
891
892
893
894
*/
float	profit_minradius(profitstruct *profit, float refffac)

  {
   double	r,reff,rmax;
   int		p;

  rmax = reff = 0.0;
  for (p=0; p<profit->nprof; p++)
    {
    switch (profit->prof[p]->code)
      {
895
896
897
898
      case PROF_BACK:
      case PROF_DIRAC:
        reff = 0.0;
      break;
899
900
      case PROF_SERSIC:
        reff = *profit->paramlist[PARAM_SPHEROID_REFF];
901
        break;
902
903
      case PROF_DEVAUCOULEURS:
        reff = *profit->paramlist[PARAM_SPHEROID_REFF];
904
        break;
905
906
      case PROF_EXPONENTIAL:
        reff = *profit->paramlist[PARAM_DISK_SCALE]*1.67835;
907
        break;
908
909
910
      default:
        error(EXIT_FAILURE, "*Internal Error*: Unknown profile parameter in ",
		"profit_minradius()");
911
        break;
912
913
914
915
916
917
918
919
920
921
      }
    r = reff*(double)refffac;
    if (r>rmax)
      rmax = r;
    }

  return (float)rmax;
  }


Emmanuel Bertin's avatar
Emmanuel Bertin committed
922
923
924
925
926
927
928
/****** profit_psf ************************************************************
PROTO	void	profit_psf(profitstruct *profit)
PURPOSE	Build the local PSF at a given resolution.
INPUT	Profile-fitting structure.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
929
VERSION	07/07/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
930
931
932
 ***/
void	profit_psf(profitstruct *profit)
  {
933
934
   double	flux;
   float	posin[2], posout[2], dnaxisn[2],
Emmanuel Bertin's avatar
Emmanuel Bertin committed
935
		*pixout,
936
		xcout,ycout, xcin,ycin, invpixstep, norm;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
937
938
939
940
941
   int		d,i;

  psf = profit->psf;
  psf_build(psf);

942
943
  xcout = (float)(profit->modnaxisn[0]/2) + 1.0;	/* FITS convention */
  ycout = (float)(profit->modnaxisn[1]/2) + 1.0;	/* FITS convention */
Emmanuel Bertin's avatar
Emmanuel Bertin committed
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
  xcin = (psf->masksize[0]/2) + 1.0;			/* FITS convention */
  ycin = (psf->masksize[1]/2) + 1.0;			/* FITS convention */
  invpixstep = profit->pixstep / psf->pixstep;

/* Initialize multi-dimensional counters */
  for (d=0; d<2; d++)
    {
    posout[d] = 1.0;					/* FITS convention */
    dnaxisn[d] = profit->modnaxisn[d]+0.5;
    }

/* Remap each pixel */
  pixout = profit->psfpix;
  flux = 0.0;
  for (i=profit->modnaxisn[0]*profit->modnaxisn[1]; i--;)
    {
    posin[0] = (posout[0] - xcout)*invpixstep + xcin;
    posin[1] = (posout[1] - ycout)*invpixstep + ycin;
    flux += ((*(pixout++) = interpolate_pix(posin, psf->maskloc,
		psf->masksize, INTERP_LANCZOS3)));
    for (d=0; d<2; d++)
      if ((posout[d]+=1.0) < dnaxisn[d])
        break;
      else
        posout[d] = 1.0;
    }

/* Normalize PSF flux (just in case...) */
972
  flux *= profit->pixstep*profit->pixstep;
973
974
975
976
977
978
979
  if (fabs(flux) <= 0.0)
    error(EXIT_FAILURE, "*Error*: PSF model is empty or negative: ", psf->name);

  norm = 1.0/flux;
  pixout = profit->psfpix;
  for (i=profit->modnaxisn[0]*profit->modnaxisn[1]; i--;)
    *(pixout++) *= norm;  
Emmanuel Bertin's avatar
Emmanuel Bertin committed
980
981
982
983
984
985
986
987
988
989
990
991
992

  return;
  }


/****** profit_minimize *******************************************************
PROTO	void profit_minimize(profitstruct *profit)
PURPOSE	Provide a function returning residuals to lmfit.
INPUT	Pointer to the profit structure involved in the fit,
	maximum number of iterations.
OUTPUT	Number of iterations used.
NOTES	-.
AUTHOR	E. Bertin (IAP)
993
VERSION	11/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
994
995
996
 ***/
int	profit_minimize(profitstruct *profit, int niter)
  {
997
998
999
   double		lm_opts[5], info[LM_INFO_SZ];
   double		dcovar[PARAM_NPARAM*PARAM_NPARAM],
			dparam[PARAM_NPARAM];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1000

1001
1002
  profit->iter = 0;
  memset(dcovar, 0, profit->nparam*profit->nparam*sizeof(double));
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1003
1004

/* Perform fit */
1005
  lm_opts[0] = 1.0e-2;
1006
1007
1008
  lm_opts[1] = 1.0e-12;
  lm_opts[2] = 1.0e-12;
  lm_opts[3] = 1.0e-12;
1009
  lm_opts[4] = 1.0e-4;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1010

1011
  profit_boundtounbound(profit, profit->paraminit, dparam, PARAM_ALLPARAMS);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1012

1013
1014
  niter = dlevmar_dif(profit_evaluate, dparam, NULL, profit->nfreeparam,
		profit->nresi, niter, lm_opts, info, NULL, dcovar, profit);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1015

1016
1017
1018
1019
  profit_unboundtobound(profit, dparam, profit->paraminit, PARAM_ALLPARAMS);

/* Convert covariance matrix to bounded space */
  profit_covarunboundtobound(profit, dcovar, profit->covar);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1020
1021
1022
1023
1024
1025

  return niter;
  }


/****** profit_printout *******************************************************
1026
PROTO	void profit_printout(int n_par, float* par, int m_dat, float* fvec,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
		void *data, int iflag, int iter, int nfev )
PURPOSE	Provide a function to print out results to lmfit.
INPUT	Number of fitted parameters,
	pointer to the vector of parameters,
	number of data points,
	pointer to the vector of residuals (output),
	pointer to the data structure (unused),
	0 (init) 1 (outer loop) 2(inner loop) -1(terminated),
	outer loop counter,
	number of calls to evaluate().
OUTPUT	-.
NOTES	Input arguments are there only for compatibility purposes (unused)
AUTHOR	E. Bertin (IAP)
VERSION	17/09/2008
 ***/
1042
void	profit_printout(int n_par, float* par, int m_dat, float* fvec,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
		void *data, int iflag, int iter, int nfev )
  {
   checkstruct	*check;
   profitstruct	*profit;
   char		filename[256];
   static int	itero;

  profit = (profitstruct *)data;

  if (0 && (iter!=itero || iter<0))
    {
    if (iter<0)
      itero++;
    else
      itero = iter;
    sprintf(filename, "check_%d_%04d.fits", the_gal, itero);
    check=initcheck(filename, CHECK_PROFILES, 0);
    reinitcheck(the_field, check);
    addcheck(check, profit->lmodpix, profit->objnaxisn[0],profit->objnaxisn[1],
		profit->ix,profit->iy, 1.0);

    reendcheck(the_field, check);
    endcheck(check);
    }

  return;
  }


/****** profit_evaluate ******************************************************
1073
1074
PROTO	void profit_evaluate(double *par, double *fvec, int m, int n,
			void *adata)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1075
1076
1077
1078
1079
PURPOSE	Provide a function returning residuals to levmar.
INPUT	Pointer to the vector of parameters,
	pointer to the vector of residuals (output),
	number of model parameters,
	number of data points,
1080
	pointer to a data structure (we use it for the profit structure here).
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1081
OUTPUT	-.
1082
NOTES	-.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1083
AUTHOR	E. Bertin (IAP)
1084
VERSION	07/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1085
 ***/
1086
void	profit_evaluate(double *dpar, double *fvec, int m, int n, void *adata)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1087
  {
1088
1089
1090
1091
1092
1093
1094
1095
   profitstruct		*profit;
   profstruct		**prof;
   double		*dpar0, *dresi;
   float		*modpixt, *profpixt, *resi,
			tparam, val;
   PIXTYPE		*lmodpixt,*lmodpix2t, *objpix,*weight,
			wval;
   int			c,f,i,p,q, fd,pd, jflag,sflag, nprof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1096
1097

  profit = (profitstruct *)adata;
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119

/* Detect "Jacobian-related" calls */
  jflag = pd = fd = 0;
  dpar0 = profit->dparam;
  if (profit->iter)
    {
    f = q = 0;
    for (p=0; p<profit->nparam; p++)
      {
      if (dpar[f] - dpar0[f] != 0.0)
        {
        pd = p;
        fd = f;
        q++;
        }
      if (profit->freeparam_flag[p])
        f++;
      }
    if (f>0 && q==1)
      jflag = 1;
    }

1120
  if (jflag && !(profit->nprof==1 && profit->prof[0]->code == PROF_DIRAC))
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
    {
    prof = profit->prof;
    nprof = profit->nprof;

/*-- "Jacobian call" */
    tparam = profit->param[pd];
    profit_unboundtobound(profit, &dpar[fd], &profit->param[pd], pd);
    sflag = 1;
    switch(profit->paramrevindex[pd])
      {
1131
1132
1133
1134
1135
1136
1137
      case PARAM_BACK:
        lmodpixt = profit->lmodpix;
        lmodpix2t = profit->lmodpix2;
        val = (profit->param[pd] - tparam);
        for (i=profit->nobjpix;i--;)
          *(lmodpix2t++) = val;
        break;
1138
1139
1140
1141
1142
1143
1144
1145
      case PARAM_X:
      case PARAM_Y:
        profit_resample(profit, profit->cmodpix, profit->lmodpix2, 1.0);
        lmodpixt = profit->lmodpix;
        lmodpix2t = profit->lmodpix2;
        for (i=profit->nobjpix;i--;)
          *(lmodpix2t++) -= *(lmodpixt++);
        break;
1146
      case PARAM_DIRAC_FLUX:
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
      case PARAM_SPHEROID_FLUX:
      case PARAM_DISK_FLUX:
      case PARAM_ARMS_FLUX:
      case PARAM_BAR_FLUX:
        if (nprof==1 && tparam != 0.0)
          {
          lmodpixt = profit->lmodpix;
          lmodpix2t = profit->lmodpix2;
          val = (profit->param[pd] - tparam) / tparam;
          for (i=profit->nobjpix;i--;)
            *(lmodpix2t++) = val**(lmodpixt++);
          }
        else
          {
          for (c=0; c<nprof; c++)
            if (prof[c]->flux == &profit->param[pd])
              break;
          memcpy(profit->modpix, prof[c]->pix, profit->nmodpix*sizeof(float));
          profit_convolve(profit, profit->modpix);
          profit_resample(profit, profit->modpix, profit->lmodpix2,
		profit->param[pd] - tparam);
          }
        break;
      case PARAM_SPHEROID_REFF:
      case PARAM_SPHEROID_ASPECT:
      case PARAM_SPHEROID_POSANG:
      case PARAM_SPHEROID_SERSICN:
        sflag = 0;			/* We are in the same switch */
        for (c=0; c<nprof; c++)
          if (prof[c]->code == PROF_SERSIC
		|| prof[c]->code == PROF_DEVAUCOULEURS)
            break; 
      case PARAM_DISK_SCALE:
      case PARAM_DISK_ASPECT:
      case PARAM_DISK_POSANG:
        if (sflag)
          for (c=0; c<nprof; c++)
            if (prof[c]->code == PROF_EXPONENTIAL)
              break; 
        sflag = 0;
      case PARAM_ARMS_QUADFRAC:
      case PARAM_ARMS_SCALE:
      case PARAM_ARMS_START:
      case PARAM_ARMS_POSANG:
      case PARAM_ARMS_PITCH:
      case PARAM_ARMS_PITCHVAR:
      case PARAM_ARMS_WIDTH:
        if (sflag)
          for (c=0; c<nprof; c++)
            if (prof[c]->code == PROF_ARMS)
              break; 
        sflag = 0;
      case PARAM_BAR_ASPECT:
      case PARAM_BAR_POSANG:
        if (sflag)
          for (c=0; c<nprof; c++)
            if (prof[c]->code == PROF_ARMS)
              break; 
        modpixt = profit->modpix;
        profpixt = prof[c]->pix;
        val = -*prof[c]->flux;
        for (i=profit->nmodpix;i--;)
          *(modpixt++) = val**(profpixt++);
        memcpy(profit->modpix2, prof[c]->pix, profit->nmodpix*sizeof(float));
        prof_add(profit, prof[c], 0);
        memcpy(prof[c]->pix, profit->modpix2, profit->nmodpix*sizeof(float));
        profit_convolve(profit, profit->modpix);
        profit_resample(profit, profit->modpix, profit->lmodpix2, 1.0);
        break;
      default:
        error(EXIT_FAILURE, "*Internal Error*: ",
			"unknown parameter index in profit_jacobian()");
        break;
      }
    objpix = profit->objpix;
    weight = profit->objweight;
    lmodpixt = profit->lmodpix;
    lmodpix2t = profit->lmodpix2;
    resi = profit->resi;
    dresi = fvec;
    if (PROFIT_DYNPARAM > 0.0)
      for (i=profit->nobjpix;i--; lmodpixt++, lmodpix2t++)
        {
        val = *(objpix++);
        if ((wval=*(weight++))>0.0)
          *(dresi++) = *(resi++) + *lmodpix2t
		* wval/(1.0+wval*fabs(*lmodpixt - val)/PROFIT_DYNPARAM);
        }
    else
      for (i=profit->nobjpix;i--; lmodpix2t++)
        if ((wval=*(weight++))>0.0)
          *(dresi++) = *(resi++) + *lmodpix2t * wval;
    }
  else
    {
/*-- "Regular call" */
    for (p=0; p<profit->nparam; p++)
      dpar0[p] = dpar[p];
    profit_unboundtobound(profit, dpar, profit->param, PARAM_ALLPARAMS);

    profit_residuals(profit, the_field, the_wfield, PROFIT_DYNPARAM,
	profit->param, profit->resi);

    for (p=0; p<profit->nresi; p++)
      fvec[p] = profit->resi[p];
    }

//  profit_printout(m, par, n, fvec, adata, 0, -1, 0 );
  profit->iter++;

Emmanuel Bertin's avatar
Emmanuel Bertin committed
1257
1258
1259
1260
1261
  return;
  }


/****** profit_residuals ******************************************************
1262
1263
PROTO	float *prof_residuals(profitstruct *profit, picstruct *field,
		picstruct *wfield, float dynparam, float *param, float *resi)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1264
1265
1266
1267
1268
PURPOSE	Compute the vector of residuals between the data and the galaxy
	profile model.
INPUT	Profile-fitting structure,
	pointer to the field,
	pointer to the field weight,
1269
	dynamic compression parameter (0=no compression),
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1270
1271
1272
1273
1274
	pointer to the model parameters (output),
	pointer to the computed residuals (output).
OUTPUT	Vector of residuals.
NOTES	-.
AUTHOR	E. Bertin (IAP)
1275
VERSION	08/07/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1276
 ***/
1277
1278
float	*profit_residuals(profitstruct *profit, picstruct *field,
		picstruct *wfield, float dynparam, float *param, float *resi)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1279
  {
1280
   int		p, nmodpix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1281

1282
1283
  nmodpix = profit->modnaxisn[0]*profit->modnaxisn[1]*sizeof(float);
  memset(profit->modpix, 0, nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1284
1285
  for (p=0; p<profit->nparam; p++)
    profit->param[p] = param[p];
1286
1287
/* Simple PSF shortcut */
  if (profit->nprof == 1 && profit->prof[0]->code == PROF_DIRAC)
1288
    {
1289
1290
    profit_resample(profit, profit->psfpix, profit->lmodpix,
		*profit->prof[0]->flux);
1291
1292
    profit->flux = *profit->prof[0]->flux;
    }
1293
1294
  else
    {
1295
    profit->flux = 0.0;
1296
    for (p=0; p<profit->nprof; p++)
1297
1298
1299
1300
      profit->flux += prof_add(profit, profit->prof[p], 0);
    memcpy(profit->cmodpix, profit->modpix, profit->nmodpix*sizeof(float));
    profit_convolve(profit, profit->cmodpix);
    profit_resample(profit, profit->cmodpix, profit->lmodpix, 1.0);
1301
    }
1302
1303
1304

  if (resi)
    profit_compresi(profit, dynparam, resi);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1305
1306
1307
1308
1309
1310

  return resi;
  }


/****** profit_compresi ******************************************************
1311
1312
PROTO	float *prof_compresi(profitstruct *profit, float dynparam,
			float *resi)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1313
1314
1315
PURPOSE	Compute the vector of residuals between the data and the galaxy
	profile model.
INPUT	Profile-fitting structure,
1316
	dynamic-compression parameter (0=no compression),
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1317
1318
1319
1320
	vector of residuals (output).
OUTPUT	Vector of residuals.
NOTES	-.
AUTHOR	E. Bertin (IAP)
1321
VERSION	07/09/2009
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1322
 ***/
1323
float	*profit_compresi(profitstruct *profit, float dynparam, float *resi)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1324
  {
1325
1326
   double	error;
   float	*resit;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1327
1328
   PIXTYPE	*objpix, *objweight, *lmodpix,
		val,val2,wval, invsig;
1329
   int		npix, i;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1330
1331
1332
1333
1334
1335
1336
  
/* Compute vector of residuals */
  resit = resi;
  objpix = profit->objpix;
  objweight = profit->objweight;
  lmodpix = profit->lmodpix;
  error = 0.0;
1337
1338
  npix = profit->objnaxisn[0]*profit->objnaxisn[1];
  if (dynparam > 0.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1339
    {
1340
1341
    invsig = (PIXTYPE)(1.0/dynparam);
    for (i=npix; i--; lmodpix++)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1342
1343
1344
1345
      {
      val = *(objpix++);
      if ((wval=*(objweight++))>0.0)
        {
1346
        val2 = (*lmodpix - val)*wval*invsig;
1347
        val2 = val2>0.0? logf(1.0+val2) : -logf(1.0-val2);
1348
        *(resit++) = val2*dynparam;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1349
1350
1351
        error += val2*val2;
        }
      }
1352
1353
1354
1355
1356
1357
1358
1359
1360
    profit->chi2 = dynparam*dynparam*error;
    }
  else
    {
    for (i=npix; i--; lmodpix++)
      {
      val = *(objpix++);
      if ((wval=*(objweight++))>0.0)
        {
1361
        val2 = (*lmodpix - val)*wval;
1362
1363
1364
1365
1366
        *(resit++) = val2;
        error += val2*val2;
        }
      }
    profit->chi2 = error;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1367
1368
1369
1370
1371
1372
1373
    }

  return resi;
  }


/****** profit_resample ******************************************************
1374
1375
PROTO	int	prof_resample(profitstruct *profit, float *inpix,
		PIXTYPE *outpix, float factor)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1376
PURPOSE	Resample the current full resolution model to image resolution.
1377
1378
1379
1380
1381
INPUT	Profile-fitting structure,
	pointer to input raster,
	pointer to output raster,
	multiplicating factor.
OUTPUT	RETURN_ERROR if the rasters don't overlap, RETURN_OK otherwise.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1382
1383
NOTES	-.
AUTHOR	E. Bertin (IAP)
1384
VERSION	12/09/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1385
 ***/
1386
int	profit_resample(profitstruct *profit, float *inpix, PIXTYPE *outpix,
1387
	float factor)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1388
  {
1389
1390
1391
1392
   PIXTYPE	*pixout,*pixout0;
   float	*pixin,*pixin0, *mask,*maskt, *pixinout, *dpixin,*dpixin0,
		*dpixout,*dpixout0, *dx,*dy,
		xcin,xcout,ycin,ycout, xsin,ysin, xin,yin, x,y, dxm,dym, val,
1393
		invpixstep, norm;
1394
1395
1396
1397
1398
1399
   int		*start,*startt, *nmask,*nmaskt,
		i,j,k,n,t, 
		ixsout,iysout, ixout,iyout, dixout,diyout, nxout,nyout,
		iysina, nyin, hmw,hmh, ix,iy, ixin,iyin;

  invpixstep = profit->subsamp/profit->pixstep;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1400

1401
1402
  xcin = (profit->modnaxisn[0]/2);
  xcout = (float)(profit->objnaxisn[0]/2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1403
1404
  if ((dx=(profit->paramlist[PARAM_X])))
    xcout += *dx;
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427

  xsin = xcin - xcout*invpixstep;			/* Input start x-coord*/
  if ((int)xsin >= profit->modnaxisn[0])
    return RETURN_ERROR;
  ixsout = 0;				/* Int. part of output start x-coord */
  if (xsin<0.0)
    {
    dixout = (int)(1.0-xsin/invpixstep);
/*-- Simply leave here if the images do not overlap in x */
    if (dixout >= profit->objnaxisn[0])
      return RETURN_ERROR;
    ixsout += dixout;
    xsin += dixout*invpixstep;
    }
  nxout = (int)((profit->modnaxisn[0]-xsin)/invpixstep);/* nb of interpolated
							input pixels along x */
  if (nxout>(ixout=profit->objnaxisn[0]-ixsout))
    nxout = ixout;
  if (!nxout)
    return RETURN_ERROR;

  ycin = (profit->modnaxisn[1]/2);
  ycout = (float)(profit->objnaxisn[1]/2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1428
1429
1430
  if ((dy=(profit->paramlist[PARAM_Y])))
    ycout += *dy;

1431
1432
1433
1434
1435
  ysin = ycin - ycout*invpixstep;		/* Input start y-coord*/
  if ((int)ysin >= profit->modnaxisn[1])
    return RETURN_ERROR;
  iysout = 0;				/* Int. part of output start y-coord */
  if (ysin<0.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1436
    {
1437
1438
1439
1440
1441
1442
    diyout = (int)(1.0-ysin/invpixstep);
/*-- Simply leave here if the images do not overlap in y */
    if (diyout >= profit->objnaxisn[1])
      return RETURN_ERROR;
    iysout += diyout;
    ysin += diyout*invpixstep;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1443
    }
1444
1445
1446
1447
1448
1449
  nyout = (int)((profit->modnaxisn[1]-ysin)/invpixstep);/* nb of interpolated
							input pixels along y */
  if (nyout>(iyout=profit->objnaxisn[1]-iysout))
    nyout = iyout;
  if (!nyout)
    return RETURN_ERROR;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1450

1451
1452
/* Set the yrange for the x-resampling with some margin for interpolation */
  iysina = (int)ysin;	/* Int. part of Input start y-coord with margin */
1453
  hmh = INTERPW/2 - 1;	/* Interpolant start */
1454
1455
  if (iysina<0 || ((iysina -= hmh)< 0))
    iysina = 0;
1456
  nyin = (int)(ysin+nyout*invpixstep)+INTERPW-hmh;/* Interpolated Input y size*/
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
  if (nyin>profit->modnaxisn[1])						/* with margin */
    nyin = profit->modnaxisn[1];
/* Express everything relative to the effective Input start (with margin) */
  nyin -= iysina;
  ysin -= (float)iysina;

/* Allocate interpolant stuff for the x direction */
  QMALLOC(mask, float, nxout*INTERPW);	/* Interpolation masks */
  QMALLOC(nmask, int, nxout);		/* Interpolation mask sizes */
  QMALLOC(start, int, nxout);		/* Int. part of Input conv starts */
/* Compute the local interpolant and data starting points in x */
  hmw = INTERPW/2 - 1;
  xin = xsin;
  maskt = mask;
  nmaskt = nmask;
  startt = start;
  for (j=nxout; j--; xin+=invpixstep)
    {
    ix = (ixin=(int)xin) - hmw;
    dxm = ixin - xin - hmw;	/* starting point in the interpolation func */
    if (ix < 0)
1478
      {
1479
1480
1481
      n = INTERPW+ix;
      dxm -= (float)ix;
      ix = 0;
1482
      }
1483
1484
1485
1486
1487
1488
    else
      n = INTERPW;
    if (n>(t=profit->modnaxisn[0]-ix))
      n=t;
    *(startt++) = ix;
    *(nmaskt++) = n;
1489
    norm = 0.0;
1490
    for (x=dxm, i=n; i--; x+=1.0)
1491
1492
1493
1494
1495
      norm += (*(maskt++) = INTERPF(x));
    norm = norm>0.0? 1.0/norm : 1.0;
    maskt -= n;
    for (i=n; i--;)
      *(maskt++) *= norm;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1496
    }
1497
1498
1499
1500
1501
1502
1503
1504
1505
1506
1507
1508
1509

  QCALLOC(pixinout, float, nxout*nyin);	/* Intermediary frame-buffer */

/* Make the interpolation in x (this includes transposition) */
  pixin0 = inpix + iysina*profit->modnaxisn[0];
  dpixout0 = pixinout;
  for (k=nyin; k--; pixin0+=profit->modnaxisn[0], dpixout0++)
    {
    maskt = mask;
    nmaskt = nmask;
    startt = start;
    dpixout = dpixout0;
    for (j=nxout; j--; dpixout+=nyin)
1510
      {
1511
1512
1513
1514
1515
      pixin = pixin0+*(startt++);
      val = 0.0; 
      for (i=*(nmaskt++); i--;)
        val += *(maskt++)**(pixin++);
      *dpixout = val;
1516
      }
1517
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1518

1519
/* Reallocate interpolant stuff for the y direction */
1520
  QREALLOC(mask, float, nyout*INTERPW);	/* Interpolation masks */
1521
1522
1523
1524
  QREALLOC(nmask, int, nyout);			/* Interpolation mask sizes */
  QREALLOC(start, int, nyout);		/* Int. part of Input conv starts */

/* Compute the local interpolant and data starting points in y */
1525
  hmh = INTERPW/2 - 1;
1526
1527
1528
1529
1530
1531
1532
1533
1534
1535
  yin = ysin;
  maskt = mask;
  nmaskt = nmask;
  startt = start;
  for (j=nyout; j--; yin+=invpixstep)
    {
    iy = (iyin=(int)yin) - hmh;
    dym = iyin - yin - hmh;	/* starting point in the interpolation func */
    if (iy < 0)
      {
1536
      n = INTERPW+iy;
1537
1538
1539
1540
      dym -= (float)iy;
      iy = 0;
      }
    else
1541
      n = INTERPW;
1542
1543
1544
1545
    if (n>(t=nyin-iy))
      n=t;
    *(startt++) = iy;
    *(nmaskt++) = n;
1546
    norm = 0.0;
1547
    for (y=dym, i=n; i--; y+=1.0)
1548
1549
1550
1551
1552
      norm += (*(maskt++) = INTERPF(y));
    norm = norm>0.0? 1.0/norm : 1.0;
    maskt -= n;
    for (i=n; i--;)
      *(maskt++) *= norm;
1553
1554
1555
1556
1557
1558
1559
1560
1561
1562
1563
1564
1565
1566
1567
1568
1569
1570
1571
1572
1573
1574
1575
1576
1577
1578
1579
1580
1581
1582
1583
    }

/* Initialize destination buffer to zero */
  memset(outpix, 0, (size_t)profit->nobjpix*sizeof(PIXTYPE));

/* Make the interpolation in y and transpose once again */
  dpixin0 = pixinout;
  pixout0 = outpix+ixsout+iysout*profit->objnaxisn[0];
  for (k=nxout; k--; dpixin0+=nyin, pixout0++)
    {
    maskt = mask;
    nmaskt = nmask;
    startt = start;
    pixout = pixout0;
    for (j=nyout; j--; pixout+=profit->objnaxisn[0])
      {
      dpixin = dpixin0+*(startt++);
      val = 0.0; 
      for (i=*(nmaskt++); i--;)
        val += *(maskt++)**(dpixin++);
       *pixout = (PIXTYPE)(factor*val);
      }
    }

/* Free memory */
  free(pixinout);
  free(mask);
  free(nmask);
  free(start);

  return RETURN_OK;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1584
1585
1586
1587
  }


/****** profit_convolve *******************************************************
1588
PROTO	void profit_convolve(profitstruct *profit, float *modpix)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1589
1590
1591
1592
1593
1594
1595
1596
PURPOSE	Convolve a model image with the local PSF.
INPUT	Pointer to the profit structure,
	Pointer to the image raster.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	15/09/2008
 ***/
1597
void	profit_convolve(profitstruct *profit, float *modpix)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1598
1599
1600
1601
1602
1603
1604
1605
1606
1607
1608
1609
1610
1611
1612
1613
1614
1615
1616
1617
1618
1619
  {
  if (!profit->psfdft)
    profit_makedft(profit);

  fft_conv(modpix, profit->psfdft, profit->modnaxisn);

  return;
  }


/****** profit_makedft *******************************************************
PROTO	void profit_makedft(profitstruct *profit)
PURPOSE	Create the Fourier transform of the descrambled PSF component.
INPUT	Pointer to the profit structure.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	22/04/2008
 ***/
void	profit_makedft(profitstruct *profit)
  {
   psfstruct	*psf;
1620
1621
   float      *mask,*maskt, *ppix;
   float       dx,dy, r,r2,rmin,rmin2,rmax,rmax2,rsig,invrsig2;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1622
1623
1624
1625
1626
1627
1628
1629
1630
1631
1632
1633
   int          width,height,npix,offset, psfwidth,psfheight,psfnpix,
                cpwidth, cpheight,hcpwidth,hcpheight, i,j,x,y;

  if (!(psf=profit->psf))
    return;

  psfwidth = profit->modnaxisn[0];
  psfheight = profit->modnaxisn[1];
  psfnpix = psfwidth*psfheight;
  width = profit->modnaxisn[0];
  height = profit->modnaxisn[1];
  npix = width*height;
1634
  QCALLOC(mask, float, npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1635
1636
1637
1638
1639
1640
1641
1642
1643
1644
1645
1646
1647
1648
1649
1650
1651
1652
1653
1654
1655
1656
1657
1658
1659
1660
1661
1662
1663
1664
1665
1666
1667
1668
1669
1670
1671
1672
1673
1674
1675
1676
1677
1678
1679
1680
1681
1682
1683
1684
1685
1686
1687
1688
1689
1690
  cpwidth = (width>psfwidth)?psfwidth:width;
  hcpwidth = cpwidth>>1;
  cpwidth = hcpwidth<<1;
  offset = width - cpwidth;
  cpheight = (height>psfheight)?psfheight:height;
  hcpheight = cpheight>>1;
  cpheight = hcpheight<<1;

/* Frame and descramble the PSF data */
  ppix = profit->psfpix + (psfheight/2)*psfwidth + psfwidth/2;
  maskt = mask;
  for (j=hcpheight; j--; ppix+=psfwidth)
    {
    for (i=hcpwidth; i--;)
      *(maskt++) = *(ppix++);      
    ppix -= cpwidth;
    maskt += offset;
    for (i=hcpwidth; i--;)
      *(maskt++) = *(ppix++);      
    }

  ppix = profit->psfpix + ((psfheight/2)-hcpheight)*psfwidth + psfwidth/2;
  maskt += width*(height-cpheight);
  for (j=hcpheight; j--; ppix+=psfwidth)
    {
    for (i=hcpwidth; i--;)
      *(maskt++) = *(ppix++);      
    ppix -= cpwidth;
    maskt += offset;
    for (i=hcpwidth; i--;)
      *(maskt++) = *(ppix++);      
    }

/* Truncate to a disk that has diameter = (box width) */
  rmax = cpwidth - 1.0 - hcpwidth;
  if (rmax > (r=hcpwidth))
    rmax = r;
  if (rmax > (r=cpheight-1.0-hcpheight))
    rmax = r;
  if (rmax > (r=hcpheight))
    rmax = r;
  if (rmax<1.0)
    rmax = 1.0;
  rmax2 = rmax*rmax;
  rsig = psf->fwhm/profit->pixstep;
  invrsig2 = 1/(2*rsig*rsig);
  rmin = rmax - (3*rsig);     /* 3 sigma annulus (almost no aliasing) */
  rmin2 = rmin*rmin;

  maskt = mask;
  dy = 0.0;
  for (y=hcpheight; y--; dy+=1.0)
    {
    dx = 0.0;
    for (x=hcpwidth; x--; dx+=1.0, maskt++)
      if ((r2=dx*dx+dy*dy)>rmin2)
1691
        *maskt *= (r2>rmax2)?0.0:expf((2*rmin*sqrtf(r2)-r2-rmin2)*invrsig2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1692
1693
1694
1695
    dx = -hcpwidth;
    maskt += offset;
    for (x=hcpwidth; x--; dx+=1.0, maskt++)
      if ((r2=dx*dx+dy*dy)>rmin2)
1696
        *maskt *= (r2>rmax2)?0.0:expf((2*rmin*sqrtf(r2)-r2-rmin2)*invrsig2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1697
1698
1699
1700
1701
1702
1703
1704
    }
  dy = -hcpheight;
  maskt += width*(height-cpheight);
  for (y=hcpheight; y--; dy+=1.0)
    {
    dx = 0.0;
    for (x=hcpwidth; x--; dx+=1.0, maskt++)
      if ((r2=dx*dx+dy*dy)>rmin2)
1705
        *maskt *= (r2>rmax2)?0.0:expf((2*rmin*sqrtf(r2)-r2-rmin2)*invrsig2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1706
1707
1708
1709
    dx = -hcpwidth;
    maskt += offset;
    for (x=hcpwidth; x--; dx+=1.0, maskt++)
      if ((r2=dx*dx+dy*dy)>rmin2)
1710
        *maskt *= (r2>rmax2)?0.0:expf((2*rmin*sqrtf(r2)-r2-rmin2)*invrsig2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1711
1712
1713
1714
1715
1716
1717
1718
1719
1720
1721
1722
1723
1724
1725
1726
1727
1728
1729
1730
1731
    }

/* Finally move to Fourier space */
  profit->psfdft = fft_rtf(mask, profit->modnaxisn);

  free(mask);

  return;
  }


/****** profit_copyobjpix *****************************************************
PROTO	int profit_copyobjpix(profitstruct *profit, picstruct *field,
			picstruct *wfield)
PURPOSE	Copy a piece of the input field image to a profit structure.
INPUT	Pointer to the profit structure,
	Pointer to the field structure,
	Pointer to the field weight structure.
OUTPUT	The number of valid pixels copied.
NOTES	Global preferences are used.
AUTHOR	E. Bertin (IAP)
1732
VERSION	01/12/2009
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1733
1734
1735
1736
 ***/
int	profit_copyobjpix(profitstruct *profit, picstruct *field,
			picstruct *wfield)
  {
1737
1738
1739
1740
   float	dx, dy2, dr2, rad2;
   PIXTYPE	*pixin,*spixin, *wpixin,*swpixin, *pixout,*wpixout,
		backnoise2, invgain, satlevel, wthresh, pix,spix, wpix,swpix;
   int		i,x,y, xmin,xmax,ymin,ymax, w,h,dw, npix, off, gainflag,
1741
		badflag, sflag, sx,sy,sn,sw, ix,iy;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1742
1743
1744
1745

/* First put the image background to -BIG */
  pixout = profit->objpix;
  wpixout = profit->objweight;
1746
  for (i=profit->objnaxisn[0]*profit->objnaxisn[1]; i--;)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1747
1748
1749
1750
1751
1752
1753
1754
1755
1756
1757
1758
    {
    *(pixout++) = -BIG;
    *(wpixout++) = 0.0;
    }

/* Don't go further if out of frame!! */
  ix = profit->ix;
  iy = profit->iy;
  if (ix<0 || ix>=field->width || iy<field->ymin || iy>=field->ymax)
    return 0;

  backnoise2 = field->backsig*field->backsig;
1759
  sn = (int)profit->subsamp;
1760
1761
1762
1763
1764
  sflag = (sn>1);
  w = profit->objnaxisn[0]*sn;
  h = profit->objnaxisn[1]*sn;
  if (sflag)
    backnoise2 *= (PIXTYPE)sn;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1765
1766
1767
1768
1769
1770
1771
1772
1773
1774
1775
1776
1777
1778
  invgain = (field->gain > 0.0) ? 1.0/field->gain : 0.0;
  satlevel = field->satur_level - profit->obj->bkg;
  rad2 = h/2.0;
  if (rad2 > w/2.0)
    rad2 = w/2.0;
  rad2 *= rad2;

/* Set the image boundaries */
  pixout = profit->objpix;
  wpixout = profit->objweight;
  ymin = iy-h/2;
  ymax = ymin + h;
  if (ymin<field->ymin)
    {
1779
1780
1781
1782
    off = (field->ymin-ymin-1)/sn + 1;
    pixout += off*profit->objnaxisn[0];
    wpixout += off*profit->objnaxisn[0];
    ymin += off*sn;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1783
1784
    }
  if (ymax>field->ymax)
1785
    ymax -= ((ymax-field->ymax-1)/sn + 1)*sn;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1786
1787
1788

  xmin = ix-w/2;
  xmax = xmin + w;
1789
  dw = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1790
1791
  if (xmax>field->width)
    {
1792
1793
1794
    off = (xmax-field->width-1)/sn + 1;
    dw += off;
    xmax -= off*sn;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1795
1796
1797
    }
  if (xmin<0)
    {
1798
1799
1800
1801
1802
1803
1804
1805
1806
1807
1808
1809
1810
1811
1812
1813
1814
1815
1816
1817
1818
1819
1820
1821
1822
    off = (-xmin-1)/sn + 1;
    pixout += off;
    wpixout += off;
    dw += off;
    xmin += off*sn;
    }
/* Make sure the input frame size is a multiple of the subsampling step */
  if (sflag)
    {
/*
    if (((rem=ymax-ymin)%sn))
      {
      ymin += rem/2;
      ymax -= (rem-rem/2);
      }
    if (((rem=xmax-xmin)%sn))
      {
      xmin += rem/2;
      pixout += rem/2;
      wpixout += rem/2;
      dw += rem;
      xmax -= (rem-rem/2);
      }
*/
    sw = field->width;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1823
1824
1825
1826
1827
1828
1829
1830
    }

/* Copy the right pixels to the destination */
  npix = 0;
  if (wfield)
    {
    wthresh = wfield->weight_thresh;
    gainflag = prefs.weightgain_flag;
1831
    if (sflag)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1832
      {
1833
1834
/*---- Sub-sampling case */
      for (y=ymin; y<ymax; y+=sn, pixout+=dw,wpixout+=dw)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1835
        {
1836
        for (x=xmin; x<xmax; x+=sn)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1837
          {
1838
1839
1840
1841
1842
1843
1844
1845
1846
1847
1848
1849
1850
1851
1852
1853
1854
1855
1856
1857
1858
1859
1860
1861
1862
1863
1864
1865
          pix = wpix = 0.0;
          badflag = 0;
          for (sy=0; sy<sn; sy++)
            {
            dy2 = (y+sy-iy);
            dy2 *= dy2;
            dx = (x-ix);
            spixin = &PIX(field, x, y+sy);
            swpixin = &PIX(wfield, x, y+sy);
            for (sx=sn; sx--;)
              {
              dr2 = dy2 + dx*dx;
              dx++;
              spix = *(spixin++);
              swpix = *(swpixin++);
              if (dr2<rad2 && spix>-BIG && spix<satlevel && swpix<wthresh)
                {
                pix += spix;
                wpix += swpix;
                }
              else
                badflag=1;
              }
            }
          *(pixout++) = pix;
          if (!badflag)	/* A single bad pixel ruins is all (saturation, etc.)*/
            {
            *(wpixout++) = 1.0 / sqrt(wpix+(pix>0.0?
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1866
		(gainflag? pix*wpix/backnoise2:pix)*invgain : 0.0));
1867
1868
1869
1870
            npix++;
            }
          else
            *(wpixout++) = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1871
1872
1873
          }
        }
      }
1874
1875
1876
1877
1878
1879
1880
1881
1882
1883
1884
1885
1886
1887
1888
1889
1890
1891
1892
1893
1894
1895
1896
1897
    else
      for (y=ymin; y<ymax; y++, pixout+=dw,wpixout+=dw)
        {
        dy2 = y-iy;
        dy2 *= dy2;
        pixin = &PIX(field, xmin, y);
        wpixin = &PIX(wfield, xmin, y);
        for (x=xmin; x<xmax; x++)
          {
          dx = x-ix;
          dr2 = dy2 + dx*dx;
          pix = *(pixin++);
          wpix = *(wpixin++);
          if (dr2<rad2 && pix>-BIG && pix<satlevel && wpix<wthresh)
            {
            *(pixout++) = pix;
            *(wpixout++) = 1.0 / sqrt(wpix+(pix>0.0?
		(gainflag? pix*wpix/backnoise2:pix)*invgain : 0.0));
            npix++;
            }
          else
            *(pixout++) = *(wpixout++) = 0.0;
          }
        }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1898
1899
    }
  else
1900
1901
    {
    if (sflag)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1902
      {
1903
1904
/*---- Sub-sampling case */
      for (y=ymin; y<ymax; y+=sn, pixout+=dw, wpixout+=dw)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1905
        {
1906
        for (x=xmin; x<xmax; x+=sn)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1907
          {
1908
1909
1910
1911
1912
1913
1914
1915
1916
1917
1918
1919
1920
1921
1922
1923
1924
1925
1926
1927
1928
1929
1930
1931
1932
1933
1934
          pix = 0.0;
          badflag = 0;
          for (sy=0; sy<sn; sy++)
            {
            dy2 = y+sy-iy;
            dy2 *= dy2;
            dx = x-ix;
            spixin = &PIX(field, x, y+sy);
            for (sx=sn; sx--;)
              {
              dr2 = dy2 + dx*dx;
              dx++;
              spix = *(spixin++);
              if (dr2<rad2 && spix>-BIG && spix<satlevel)
                pix += spix;
              else
                badflag=1;
              }
            }
          *(pixout++) = pix;
          if (!badflag)	/* A single bad pixel ruins is all (saturation, etc.)*/
            {
            *(wpixout++) = 1.0 / sqrt(backnoise2 + (pix>0.0?pix*invgain:0.0));
            npix++;
            }
          else
            *(wpixout++) = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1935
1936
1937
          }
        }
      }
1938
1939
1940
1941
1942
1943
1944
1945
1946
1947
1948
1949
1950
1951
1952
1953
1954
1955
1956
1957
1958
1959
    else
      for (y=ymin; y<ymax; y++, pixout+=dw,wpixout+=dw)
        {
        dy2 = y-iy;
        dy2 *= dy2;
        pixin = &PIX(field, xmin, y);
        for (x=xmin; x<xmax; x++)
          {
          dx = x-ix;
          dr2 = dy2 + dx*dx;
          pix = *(pixin++);
          if (dr2<rad2 && pix>-BIG && pix<satlevel)
            {
            *(pixout++) = pix;
            *(wpixout++) = 1.0 / sqrt(backnoise2 + (pix>0.0?pix*invgain : 0.0));
            npix++;
            }
          else
            *(pixout++) = *(wpixout++) = 0.0;
          }
        }
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1960
1961
1962
1963
1964
1965
 
  return npix;
  }


/****** profit_spiralindex ****************************************************
1966
PROTO	float profit_spiralindex(profitstruct *profit)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1967
1968
1969
1970
1971
1972
1973
1974
1975
PURPOSE	Compute the spiral index of a galaxy image (positive for arms
	extending counter-clockwise and negative for arms extending CW, 0 for
	no spiral pattern).
INPUT	Profile-fitting structure.
OUTPUT	Vector of residuals.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	18/09/2008
 ***/
1976
float profit_spiralindex(profitstruct *profit)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1977
1978
1979
  {
   objstruct	*obj;
   obj2struct	*obj2;
1980
   float	*dx,*dy, *fdx,*fdy, *gdx,*gdy, *gdxt,*gdyt, *pix,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1981
1982
1983
1984
1985
1986
1987
1988
1989
1990
1991
1992
1993
1994
1995
1996
		fwhm, invtwosigma2, hw,hh, ohw,ohh, x,y,xstart, tx,ty,txstart,
		gx,gy, r2, spirindex, invsig, val, sep;
   PIXTYPE	*fpix;
   int		i,j, npix;

  npix = profit->objnaxisn[0]*profit->objnaxisn[1];

  obj = profit->obj;
  obj2 = profit->obj2;
/* Compute simple derivative vectors at a fraction of the object scale */
  fwhm = obj2->hl_radius * 2.0 / 4.0;
  if (fwhm < 2.0)
    fwhm = 2.0;
  sep = 2.0;

  invtwosigma2 = -(2.35*2.35/(2.0*fwhm*fwhm));
1997
  hw = (float)(profit->objnaxisn[0]/2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
1998
  ohw = profit->objnaxisn[0] - hw;
1999
  hh = (float)(profit->objnaxisn[1]/2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2000
2001
2002
  ohh = profit->objnaxisn[1] - hh;
  txstart = -hw;
  ty = -hh;
2003
  QMALLOC(dx, float, npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
  pix = dx;
  for (j=profit->objnaxisn[1]; j--; ty+=1.0)
    {
    tx = txstart;
    y = ty < -0.5? ty + hh : ty - ohh;
    for (i=profit->objnaxisn[0]; i--; tx+=1.0)
      {
      x = tx < -0.5? tx + hw : tx - ohw;
      *(pix++) = exp(invtwosigma2*((x+sep)*(x+sep)+y*y))
		- exp(invtwosigma2*((x-sep)*(x-sep)+y*y));
      }
    }
2016
  QMALLOC(dy, float, npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2017
2018
2019
2020
2021
2022
2023
2024
2025
2026
2027
2028
2029
2030
  pix = dy;
  ty = -hh;
  for (j=profit->objnaxisn[1]; j--; ty+=1.0)
    {
    tx = txstart;
    y = ty < -0.5? ty + hh : ty - ohh;
    for (i=profit->objnaxisn[0]; i--; tx+=1.0)
      {
      x = tx < -0.5? tx + hw : tx - ohw;
      *(pix++) = exp(invtwosigma2*(x*x+(y+sep)*(y+sep)))
		- exp(invtwosigma2*(x*x+(y-sep)*(y-sep)));
      }
    }

2031
  QMALLOC(gdx, float, npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2032
2033
2034
2035
2036
2037
2038
2039
2040
  gdxt = gdx;
  fpix = profit->objpix;
  invsig = npix/profit->sigma;
  for (i=npix; i--; fpix++)
    {
    val = *fpix > -1e29? *fpix*invsig : 0.0;
    *(gdxt++) = (val>0.0? log(1.0+val) : -log(1.0-val));
    }
  gdy = NULL;			/* to avoid gcc -Wall warnings */
2041
  QMEMCPY(gdx, gdy, float, npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2042
2043
2044
2045
2046
2047
2048
2049
2050
2051
2052
2053
2054
2055
2056
2057
2058
2059
2060
2061
2062
2063
2064
2065
2066
2067
2068
2069
2070
2071
2072
2073
2074
2075
2076
2077
2078
  fdx = fft_rtf(dx, profit->objnaxisn);
  fft_conv(gdx, fdx, profit->objnaxisn);
  fdy = fft_rtf(dy, profit->objnaxisn);
  fft_conv(gdy, fdy, profit->objnaxisn);

/* Compute estimator */
  invtwosigma2 = -1.18*1.18 / (2.0*obj2->hl_radius*obj2->hl_radius);
  xstart = -hw - obj->mx + (int)(obj->mx+0.49999);
  y = -hh -  obj->my + (int)(obj->my+0.49999);;
  spirindex = 0.0;
  gdxt = gdx;
  gdyt = gdy;
  for (j=profit->objnaxisn[1]; j--; y+=1.0)
    {
    x = xstart;
    for (i=profit->objnaxisn[0]; i--; x+=1.0)
      {
      gx = *(gdxt++);
      gy = *(gdyt++);
      if ((r2=x*x+y*y)>0.0)
        spirindex += (x*y*(gx*gx-gy*gy)+gx*gy*(y*y-x*x))/r2
			* exp(invtwosigma2*r2);
      }
    }

  free(dx);
  free(dy);
  free(fdx);
  free(fdy);
  free(gdx);
  free(gdy);

  return spirindex;
  }


/****** profit_moments ****************************************************
2079
PROTO	void profit_moments(profitstruct *profit, obj2struct *obj2)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2080
PURPOSE	Compute the 2nd order moments from the unconvolved object model.
2081
2082
INPUT	Profile-fitting structure,
	Pointer to obj2 structure.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2083
2084
2085
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2086
VERSION	20/08/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2087
 ***/
2088
void	 profit_moments(profitstruct *profit, obj2struct *obj2)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2089
  {
2090
   profstruct	*prof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2091
2092
2093
2094
2095
2096
   double	dpdmx2[6], cov[4],
		*jac,*jact, *pjac,*pjact, *dcovar,*dcovart,
		*dmx2,*dmy2,*dmxy,
		m0,invm0, mx2,my2,mxy, den,invden,
		temp, temp2,invtemp2,invstemp2,
		pmx2,theta, flux, dval;
2097
2098
2099
   float	 *covart;
   int		findex[PROF_NPROF],
		i,j,p, nparam;
2100
2101
2102
2103
2104
2105
2106
2107
2108
2109
2110
2111
2112
2113
2114
2115
2116
2117
2118
2119
2120
2121
2122
2123
2124
2125
2126
2127
2128
2129
2130
2131
2132
2133

/*  hw = (float)(profit->modnaxisn[0]/2);*/
/*  hh = (float)(profit->modnaxisn[1]/2);*/
/*  r2max = hw<hh? hw*hw : hh*hh;*/
/*  xstart = -hw;*/
/*  y = -hh;*/
/*  pix = profit->modpix;*/
/*  mx2 = my2 = mxy = mx = my = sum = 0.0;*/
/*  for (iy=profit->modnaxisn[1]; iy--; y+=1.0)*/
/*    {*/
/*    x = xstart;*/
/*    for (ix=profit->modnaxisn[0]; ix--; x+=1.0)*/
/*      if (y*y+x*x <= r2max)*/
/*        {*/
/*        val = *(pix++);*/
/*        sum += val;*/
/*        mx  += val*x;*/
/*        my  += val*y;*/
/*        mx2 += val*x*x;*/
/*        mxy += val*x*y;*/
/*        my2 += val*y*y;*/
/*        }*/
/*      else*/
/*        pix++;*/
/*    }*/

/*  if (sum <= 1.0/BIG)*/
/*    sum = 1.0;*/
/*  mx /= sum;*/
/*  my /= sum;*/
/*  obj2->prof_mx2 = mx2 = mx2/sum - mx*mx;*/
/*  obj2->prof_my2 = my2 = my2/sum - my*my;*/
/*  obj2->prof_mxy = mxy = mxy/sum - mx*my;*/

2134
  nparam = profit->nparam;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2135
  if (FLAG(obj2.prof_e1err) || FLAG(obj2.prof_pol1err))
2136
2137
2138
    {
/*-- Set up Jacobian matrices */
    QCALLOC(jac, double, nparam*3);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2139
2140
2141
2142
2143
2144
    QMALLOC(pjac, double, (nparam<2? 6 : nparam*3));
    QMALLOC(dcovar, double, nparam*nparam);
    dcovart = dcovar;
    covart = profit->covar;
    for (i=nparam*nparam; i--;)
      *(dcovart++) = (double)(*(covart++));
2145
2146
2147
2148
2149
    dmx2 = jac;
    dmy2 = jac+nparam;
    dmxy = jac+2*nparam;
    }
  else
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2150
    jac = pjac = dcovar = dmx2 = dmy2 = dmxy = NULL;
2151

2152
2153
  m0 = mx2 = my2 = mxy = 0.0;
  for (p=0; p<profit->nprof; p++)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2154
    {
2155
    prof = profit->prof[p];
2156
2157
2158
2159
2160
2161
2162
2163
2164
2165
2166
2167
2168
2169
2170
2171
2172
2173
2174
2175
2176
2177
2178
    findex[p] = prof_moments(profit, prof, pjac);
    flux = *prof->flux;
    m0 += flux;
    mx2 += prof->mx2*flux;
    my2 += prof->my2*flux;
    mxy += prof->mxy*flux;
    if (jac)
      {
      jact = jac;
      pjact = pjac;
      for (j=nparam*3; j--;)
        *(jact++) += flux * *(pjact++);
      }
    }
  invm0 = 1.0 / m0;
  obj2->prof_mx2 = (mx2 *= invm0);
  obj2->prof_my2 = (my2 *= invm0);
  obj2->prof_mxy = (mxy *= invm0);
/* Complete the flux derivative of moments */
  if (jac)
    {
    for (p=0; p<profit->nprof; p++)
      {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2179
2180
2181
2182
      prof = profit->prof[p];
      dmx2[findex[p]] = prof->mx2 - mx2;
      dmy2[findex[p]] = prof->my2 - my2;
      dmxy[findex[p]] = prof->mxy - mxy;
2183
2184
2185
2186
      }
    jact = jac;
    for (j=nparam*3; j--;)
      *(jact++) *= invm0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2187
    }
2188
2189
2190

/* Handle fully correlated profiles (which cause a singularity...) */
  if ((temp2=mx2*my2-mxy*mxy)<0.00694)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2191
    {
2192
2193
2194
2195
2196
    mx2 += 0.0833333;
    my2 += 0.0833333;
    temp2 = mx2*my2-mxy*mxy;
    }

Emmanuel Bertin's avatar
Emmanuel Bertin committed
2197
2198
2199
2200
2201
/* Use the Jacobians to compute the moment covariance matrix */
  if (jac)
    propagate_covar(dcovar, jac, obj2->prof_mx2cov, nparam, 3,
						pjac);	/* We re-use pjac */

2202
  if (FLAG(obj2.prof_pol1))
2203
    {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2204
/*--- "Polarisation", i.e. module = (a^2-b^2)/(a^2+b^2) */
2205
2206
2207
2208
    if (mx2+my2 > 1.0/BIG)
      {
      obj2->prof_pol1 = (mx2 - my2) / (mx2+my2);
      obj2->prof_pol2 = 2.0*mxy / (mx2 + my2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2209
      if (FLAG(obj2.prof_pol1err))
2210
        {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2211
2212
2213
2214
2215
2216
2217
2218
2219
2220
2221
2222
2223
2224
2225
2226
/*------ Compute the Jacobian of polarisation */
        invden = 1.0/(mx2+my2);
        dpdmx2[0] =  2.0*my2*invden*invden;
        dpdmx2[1] = -2.0*mx2*invden*invden;
        dpdmx2[2] =  0.0;
        dpdmx2[3] = -2.0*mxy*invden*invden;
        dpdmx2[4] = -2.0*mxy*invden*invden;
        dpdmx2[5] =  2.0*invden;

/*------ Use the Jacobian to compute the polarisation covariance matrix */
        propagate_covar(obj2->prof_mx2cov, dpdmx2, cov, 3, 2,
						pjac);	/* We re-use pjac */
        obj2->prof_pol1err = (float)sqrt(cov[0]<0.0? 0.0: cov[0]);
        obj2->prof_pol2err = (float)sqrt(cov[3]<0.0? 0.0: cov[3]);
        obj2->prof_pol12corr = (dval=cov[0]*cov[3]) > 0.0?
					(float)(cov[1]/sqrt(dval)) : 0.0;
2227
2228
2229
2230
        }
      }
    else
      obj2->prof_pol1 = obj2->prof_pol2
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2231
	= obj2->prof_pol1err = obj2->prof_pol2err = obj2->prof_pol12corr = 0.0;
2232
2233
2234
2235
    }

  if (FLAG(obj2.prof_e1))
    {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2236
/*--- "Ellipticity", i.e. module = (a-b)/(a+b) */
2237
2238
    if (mx2+my2 > 1.0/BIG)
      {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2239
2240
      den = (temp2>=0.0) ? mx2+my2+2.0*sqrt(temp2) : mx2+my2;
      invden = 1.0/den;
2241
2242
      obj2->prof_e1 = (float)(invden * (mx2 - my2));
      obj2->prof_e2 = (float)(2.0 * invden * mxy);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2243
      if (FLAG(obj2.prof_e1err))
2244
        {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2245
/*------ Compute the Jacobian of ellipticity */
2246
        invstemp2 = (temp2>=0.0) ? 1.0/sqrt(temp2) : 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2247
2248
2249
2250
2251
2252
2253
2254
2255
2256
2257
2258
2259
2260
        dpdmx2[0] = ( den - (1.0+my2*invstemp2)*(mx2-my2))*invden*invden;
        dpdmx2[1] = (-den - (1.0+mx2*invstemp2)*(mx2-my2))*invden*invden;
        dpdmx2[2] = 2.0*mxy*invstemp2*(mx2-my2)*invden*invden;
        dpdmx2[3] = -2.0*mxy*(1.0+my2*invstemp2)*invden*invden;
        dpdmx2[4] = -2.0*mxy*(1.0+mx2*invstemp2)*invden*invden;
        dpdmx2[5] =  (2.0*den+4.0*mxy*mxy*invstemp2)*invden*invden;

/*------ Use the Jacobian to compute the ellipticity covariance matrix */
        propagate_covar(obj2->prof_mx2cov, dpdmx2, cov, 3, 2,
					pjac);	/* We re-use pjac */
        obj2->prof_e1err = (float)sqrt(cov[0]<0.0? 0.0: cov[0]);
        obj2->prof_e2err = (float)sqrt(cov[3]<0.0? 0.0: cov[3]);
        obj2->prof_e12corr = (dval=cov[0]*cov[3]) > 0.0?
					(float)(cov[1]/sqrt(dval)) : 0.0;
2261
        }
2262
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2263
    else
2264
      obj2->prof_e1 = obj2->prof_e2
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2265
	= obj2->prof_e1err = obj2->prof_e2err = obj2->prof_e12corr = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2266
    }
2267
2268
2269

  if (FLAG(obj2.prof_cxx))
    {
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2270
2271
2272
2273
    invtemp2 = (temp2>=0.0) ? 1.0/temp2 : 0.0;
    obj2->prof_cxx = (float)(my2*invtemp2);
    obj2->prof_cyy = (float)(mx2*invtemp2);
    obj2->prof_cxy = (float)(-2*mxy*invtemp2);
2274
2275
2276
2277
2278
2279
2280
2281
2282
2283
2284
2285
2286
2287
2288
2289
    }

  if (FLAG(obj2.prof_a))
    {
    if ((fabs(temp=mx2-my2)) > 0.0)
      theta = atan2(2.0 * mxy,temp) / 2.0;
    else
      theta = PI/4.0;

    temp = sqrt(0.25*temp*temp+mxy*mxy);
    pmx2 = 0.5*(mx2+my2);
    obj2->prof_a = (float)sqrt(pmx2 + temp);
    obj2->prof_b = (float)sqrt(pmx2 - temp);
    obj2->prof_theta = theta*180.0/PI;
    }

2290
2291
2292
/* Free memory used by Jacobians */
  free(jac);
  free(pjac);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2293
  free(dcovar);
2294

Emmanuel Bertin's avatar
Emmanuel Bertin committed
2295
2296
2297
2298
  return;
  }


2299
/****** profit_surface ****************************************************
2300
PROTO	void profit_surface(profitstruct *profit, obj2struct *obj2)
2301
2302
PURPOSE	Compute surface brightnesses from the unconvolved object model.
INPUT	Pointer to the profile-fitting structure,
2303
	Pointer to obj2 structure.
2304
2305
2306
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2307
VERSION	08/07/2010
2308
 ***/
2309
void	 profit_surface(profitstruct *profit, obj2struct *obj2)
2310
  {
2311
   profitstruct	hdprofit;
2312
   double	dsum,dhsum,dsumoff, dhval, frac, seff;
2313
2314
2315
2316
2317
2318
2319
2320
2321
2322
2323
2324
2325
2326
2327
2328
2329
2330
2331
2332
2333
2334
2335
2336
2337
   float	*spix, *spixt,
		val,vmax,
		scalefac, imsizefac, flux, lost, sum, lostfluxfrac;
   int		i,p, imax, npix, neff;

/* Allocate "high-definition" raster only to make measurements */
  hdprofit.oversamp = PROFIT_OVERSAMP;
  hdprofit.modnaxisn[0] = hdprofit.modnaxisn[1] = PROFIT_HIDEFRES;
  npix = hdprofit.nmodpix = hdprofit.modnaxisn[0]*hdprofit.modnaxisn[1];
/* Find best image size factor from fitting results */
  imsizefac = 2.0*profit_minradius(profit, PROFIT_REFFFAC)/profit->pixstep
	/ (float)profit->modnaxisn[0];
  if (imsizefac<0.01)
    imsizefac = 0.01;
  else if (imsizefac>100.0)
    imsizefac = 100.0;
  scalefac = (float)hdprofit.modnaxisn[0] / (float)profit->modnaxisn[0]
	/ imsizefac;
  hdprofit.pixstep = profit->pixstep / scalefac;
  hdprofit.fluxfac = scalefac*scalefac;
  QCALLOC(hdprofit.modpix, float,npix*sizeof(float));

  for (p=0; p<profit->nparam; p++)
    profit->param[p] = profit->paraminit[p];
  lost = sum = 0.0;
2338

2339
2340
2341
2342
2343
2344
2345
2346
2347
2348
2349
2350
2351
2352
2353
2354
2355
2356
2357
2358
2359
2360
2361
2362
2363
2364
2365
2366
2367
2368
2369
2370
2371
2372
2373
2374
2375
2376
2377
2378
2379
2380
2381
2382
2383
2384
2385
2386
2387
2388
2389
2390
2391
2392
2393
  for (p=0; p<profit->nprof; p++)
    {
    sum += (flux = prof_add(&hdprofit, profit->prof[p],0));
    lost += flux*profit->prof[p]->lostfluxfrac;
    }
  lostfluxfrac = sum > 0.0? lost / sum : 0.0;

/*
char filename[256];
sprintf(filename, "raster_%02d.fits", the_gal);
check=initcheck(filename, CHECK_OTHER, 0);
check->width = hdprofit.modnaxisn[0];
check->height = hdprofit.modnaxisn[1];
reinitcheck(the_field, check);
memcpy(check->pix,hdprofit.modpix,check->npix*sizeof(float));


int r,t;
double ratio,ratio0,ang,ang0, x,x0,y,y0;
list = profit->paramlist;
index = profit->paramindex;
for (p=0; p<nparam; p++)
param[p] = profit->paraminit[p];

ratio0 = profit->paraminit[index[PARAM_SPHEROID_ASPECT]];
ang0 = profit->paraminit[index[PARAM_SPHEROID_POSANG]];
x0 = profit->paraminit[index[PARAM_X]];
y0 = profit->paraminit[index[PARAM_Y]];
for (r=0;r<check->height;r++)
for (t=0; t<check->width;t++)
{
//x = (r-10.0)/100.0 + x0;
//y = (t-10.0)/100.0 + y0;
ratio = ratio0*exp((r-10.0)/400.0);
ang = ang0+(t-10.0)/3.0;

for (i=0; i<PARAM_NPARAM; i++)
{
//if (list[i] && i==PARAM_X)
//param[index[i]] = x;
//if (list[i] && i==PARAM_Y)
//param[index[i]] = y;
if (list[i] && i==PARAM_SPHEROID_ASPECT)
param[index[i]] = ratio;
if (list[i] && i==PARAM_SPHEROID_POSANG)
param[index[i]] = ang;
//if (list[i] && i==PARAM_SPHEROID_REFF)
//param[index[i]] = profit->paraminit[index[i]]*sqrt(ratio0/ratio);
}
profit_residuals(profit,field,wfield, PROFIT_DYNPARAM, param,profit->resi);
*((float *)check->pix + t + r*check->width) = profit->chi2;
}
reendcheck(the_field, check);
endcheck(check);
*/
2394
2395
2396

  if (FLAG(obj2.fluxeff_prof))
    {
2397
2398
2399
/*-- Sort model pixel values */
    spix = NULL;			/* to avoid gcc -Wall warnings */
    QMEMCPY(hdprofit.modpix, spix, float, npix);
2400
    fqmedian(spix, npix);
2401
2402
2403
2404
2405
2406
2407
2408
2409
2410
2411
2412
2413
2414
2415
2416
2417
2418
2419
2420
2421
2422
2423
2424
2425
2426
2427
2428
2429
2430
2431
2432
2433
2434
2435
2436
/*-- Build a cumulative distribution */
    dsum = 0.0;
    spixt = spix;
    for (i=npix; i--;)
      dsum += (double)*(spixt++);
/*-- Find matching surface brightness */
    if (lostfluxfrac > 1.0)
      lostfluxfrac = 0.0;
    dhsum = 0.5 * dsum / (1.0-lostfluxfrac);
    dsum = lostfluxfrac * dsum / (1.0-lostfluxfrac);
    neff = 0;
    spixt = spix;
    for (i=npix; i--;)
      if ((dsum += (double)*(spixt++)) >= dhsum)
        {
        neff = i;
        break;
        }
    dhval = (double)*(spixt-1);
    seff = neff;
    dsumoff = 0.0;
    if (spixt>=spix+2)
      if (dhval > 0.0 && (frac = (dsum - dhsum) / dhval) < 1.0)
        {
        seff += frac;
        dsumoff = frac*dhval;
        dhval = dsumoff + (1.0 - frac)*(double)*(spixt-2);
        }
    obj2->fluxeff_prof = dhval;
    if (FLAG(obj2.fluxmean_prof))
      {
      dsum = dsumoff;
      for (i=neff; i--;)
        dsum += (double)*(spixt++);
      obj2->fluxmean_prof = seff > 0.0? dsum / seff : 0.0;
      }
2437
2438
2439
2440
2441
2442
2443
2444
2445
2446
2447
2448
2449
2450
2451
2452
2453
2454
2455
2456
2457
2458
2459
2460
    free(spix);
    }

/* Compute model peak (overwrites oversampled model!!) */
  if (FLAG(obj2.peak_prof))
    {
/*-- Find position of maximum pixel in current hi-def raster */
    imax = 0;
    vmax = -BIG;
    spixt = hdprofit.modpix;
    for (i=npix; i--;)
      if ((val=*(spixt++))>vmax)
        {
        vmax = val;
        imax = i;
        }
    imax = npix-1 - imax;
/*-- Recompute hi-def model raster without oversampling */
/*-- and with the same flux correction factor */
    hdprofit.oversamp = 0;
    memset(hdprofit.modpix,0, npix*sizeof(float));
    for (p=0; p<profit->nprof; p++)
      prof_add(&hdprofit, profit->prof[p], 1);
    obj2->peak_prof = hdprofit.modpix[imax];
2461
2462
    }

2463
2464
/* Free hi-def model raster */
  free(hdprofit.modpix);
2465
2466
2467
2468
2469

  return;
  }


Emmanuel Bertin's avatar
Emmanuel Bertin committed
2470
2471
/****** profit_addparam *******************************************************
PROTO	void profit_addparam(profitstruct *profit, paramenum paramindex,
2472
		float **param)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2473
2474
2475
2476
2477
2478
2479
PURPOSE	Add a profile parameter to the list of fitted items.
INPUT	Pointer to the profit structure,
	Parameter index,
	Pointer to the parameter pointer.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2480
VERSION	29/03/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2481
2482
 ***/
void	profit_addparam(profitstruct *profit, paramenum paramindex,
2483
		float **param)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2484
2485
2486
2487
2488
2489
2490
2491
2492
  {
/* Check whether the parameter has already be registered */
  if (profit->paramlist[paramindex])
/*-- Yes */
    *param = profit->paramlist[paramindex];
  else
/*-- No */
    {
    *param = profit->paramlist[paramindex] = &profit->param[profit->nparam];
2493
2494
    profit->paramindex[paramindex] = profit->nparam;
    profit->paramrevindex[profit->nparam++] = paramindex;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2495
2496
2497
2498
2499
2500
2501
2502
2503
2504
2505
2506
2507
2508
    }

  return;
  }


/****** profit_resetparam ****************************************************
PROTO	void profit_resetparam(profitstruct *profit, paramenum paramtype)
PURPOSE	Set the initial, lower and upper boundary values of a profile parameter.
INPUT	Pointer to the profit structure,
	Parameter index.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2509
VERSION	08/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2510
2511
2512
2513
2514
 ***/
void	profit_resetparam(profitstruct *profit, paramenum paramtype)
  {
   objstruct	*obj;
   obj2struct	*obj2;
2515
   float	param, parammin,parammax, range;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2516
2517
2518
2519

  obj = profit->obj;
  obj2 = profit->obj2;
  param = parammin = parammax = 0.0;	/* Avoid gcc -Wall warnings*/
2520

Emmanuel Bertin's avatar
Emmanuel Bertin committed
2521
2522
2523
2524
2525
2526
2527
2528
2529
  switch(paramtype)
    {
    case PARAM_BACK:
      param = 0.0;
      parammin = -6.0*obj->sigbkg;
      parammax =  6.0*obj->sigbkg;
      break;
    case PARAM_X:
      param = obj->mx - (int)(obj->mx+0.49999);
2530
      range = obj2->hl_radius*4.0;
2531
2532
2533
2534
      if (range>profit->objnaxisn[0]*2.0)
        range = profit->objnaxisn[0]*2.0;
      parammin = -range;
      parammax =  range;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2535
2536
2537
      break;
    case PARAM_Y:
      param = obj->my - (int)(obj->my+0.49999);
2538
      range = obj2->hl_radius*4.0;
2539
2540
2541
2542
      if (range>profit->objnaxisn[1]*2)
        range = profit->objnaxisn[1]*2;
      parammin = -range;
      parammax =  range;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2543
      break;
2544
2545
    case PARAM_DIRAC_FLUX:
      param = obj2->flux_auto/profit->nprof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2546
2547
2548
      parammin = -obj2->flux_auto/1000.0;
      parammax = 2*obj2->flux_auto;
      break;
2549
2550
2551
2552
2553
    case PARAM_SPHEROID_FLUX:
      param = obj2->flux_auto/profit->nprof;
      parammin = -obj2->flux_auto/1000.0;
      parammax = 4*obj2->flux_auto;
      break;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2554
    case PARAM_SPHEROID_REFF:
2555
2556
2557
      param = FLAG(obj2.prof_disk_flux)? obj2->hl_radius
				: obj2->hl_radius*sqrtf(obj->a/obj->b);
      parammin = 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2558
2559
2560
2561
2562
      parammax = param * 4.0;
      break;
    case PARAM_SPHEROID_ASPECT:
      param = FLAG(obj2.prof_disk_flux)? 1.0 : obj->b/obj->a;
      parammin = FLAG(obj2.prof_disk_flux)? 0.5 : 0.01;
2563
      parammax = FLAG(obj2.prof_disk_flux)? 2.0 : 100.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2564
2565
2566
      break;
    case PARAM_SPHEROID_POSANG:
      param = obj->theta;
2567
2568
      parammin = 90.0;
      parammax =  90.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2569
2570
2571
      break;
    case PARAM_SPHEROID_SERSICN:
      param = 4.0;
2572
      parammin = FLAG(obj2.prof_disk_flux)? 1.0 : 0.3;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2573
2574
2575
      parammax = 10.0;
      break;
    case PARAM_DISK_FLUX:
2576
      param = obj2->flux_auto/profit->nprof;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2577
2578
2579
2580
      parammin = -obj2->flux_auto/1000.0;
      parammax = 2*obj2->flux_auto;
      break;
    case PARAM_DISK_SCALE:	/* From scalelength to Re */
2581
2582
      param = obj2->hl_radius/1.67835*sqrtf(obj->a/obj->b);
      parammin = FLAG(obj2.prof_spheroid_flux)? 0.0 : param/4.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2583
2584
2585
2586
2587
      parammax = param * 4.0;
      break;
    case PARAM_DISK_ASPECT:
      param = obj->b/obj->a;
      parammin = 0.01;
2588
      parammax = 100.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2589
2590
2591
      break;
    case PARAM_DISK_POSANG:
      param = obj->theta;
2592
2593
      parammin = 90.0;
      parammax =  90.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2594
2595
2596
2597
2598
2599
2600
2601
2602
2603
2604
2605
2606
2607
2608
2609
2610
2611
2612
2613
2614
2615
2616
2617
2618
2619
2620
2621
2622
2623
2624
2625
2626
2627
2628
2629
2630
2631
2632
2633
2634
2635
2636
2637
2638
2639
2640
2641
2642
2643
2644
2645
2646
2647
2648
2649
2650
2651
2652
2653
2654
2655
2656
2657
2658
2659
2660
2661
2662
2663
2664
2665
2666
2667
2668
2669
2670
2671
2672
2673
2674
2675
2676
2677
2678
2679
2680
2681
2682
2683
2684
2685
2686
2687
2688
2689
2690
2691
2692
2693
2694
2695
      break;
    case PARAM_ARMS_FLUX:
      param = obj2->flux_auto/2.0;
      parammin = 0.0;
      parammax = obj2->flux_auto*2.0;
      break;
    case PARAM_ARMS_QUADFRAC:
      param = 0.5;
      parammin = 0.0;
      parammax = 1.0;
      break;
    case PARAM_ARMS_SCALE:
      param = 1.0;
      parammin = 0.5;
      parammax = 10.0;
      break;
    case PARAM_ARMS_START:
      param = 0.5;
      parammin = 0.0;
      parammax = 3.0;
      break;
    case PARAM_ARMS_PITCH:
      param = 20.0;
      parammin = 5.0;
      parammax = 50.0;
      break;
    case PARAM_ARMS_PITCHVAR:
      param = 0.0;
      parammin = -1.0;
      parammax = 1.0;
      break;
//      if ((profit->spirindex=profit_spiralindex(profit, obj, obj2)) > 0.0)
//        {
//        param = -param;
//        parammin = -parammax;
//        parammax = -parammin;
//        }
//      printf("spiral index: %g  \n", profit->spirindex);
//      break;
    case PARAM_ARMS_POSANG:
      param = 0.0;
      parammin = 0.0;
      parammax = 0.0;
      break;
    case PARAM_ARMS_WIDTH:
      param = 3.0;
      parammin = 1.5;
      parammax = 11.0;
      break;
    case PARAM_BAR_FLUX:
      param = obj2->flux_auto/10.0;
      parammin = 0.0;
      parammax = 2.0*obj2->flux_auto;
      break;
    case PARAM_BAR_ASPECT:
      param = 0.3;
      parammin = 0.2;
      parammax = 0.5;
      break;
    case PARAM_BAR_POSANG:
      param = 0.0;
      parammin = 0.0;
      parammax = 0.0;
      break;
    case PARAM_INRING_FLUX:
      param = obj2->flux_auto/10.0;
      parammin = 0.0;
      parammax = 2.0*obj2->flux_auto;
      break;
    case PARAM_INRING_WIDTH:
      param = 0.3;
      parammin = 0.0;
      parammax = 0.5;
      break;
    case PARAM_INRING_ASPECT:
      param = 0.8;
      parammin = 0.4;
      parammax = 1.0;
      break;
    case PARAM_OUTRING_FLUX:
      param = obj2->flux_auto/10.0;
      parammin = 0.0;
      parammax = 2.0*obj2->flux_auto;
      break;
    case PARAM_OUTRING_START:
      param = 4.0;
      parammin = 3.5;
      parammax = 6.0;
      break;
    case PARAM_OUTRING_WIDTH:
      param = 0.3;
      parammin = 0.0;
      parammax = 0.5;
      break;
    default:
      error(EXIT_FAILURE, "*Internal Error*: Unknown profile parameter in ",
		"profit_resetparam()");
      break;
   }

  if (parammin!=parammax && (param<=parammin || param>=parammax))
    param = (parammin+parammax)/2.0;
2696
2697
  else if (parammin==0.0 && parammax==0.0)
    parammax = 1.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2698
2699
2700
2701
2702
2703
2704
2705
2706
2707
2708
2709
2710
2711
2712
2713
2714
2715
2716
2717
2718
2719
2720
2721
2722
2723
2724
2725
2726
  profit_setparam(profit, paramtype, param, parammin, parammax);

  return;
  }


/****** profit_resetparams ****************************************************
PROTO	void profit_resetparams(profitstruct *profit)
PURPOSE	Set the initial, lower and upper boundary values of profile parameters.
INPUT	Pointer to the profit structure.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	18/09/2008
 ***/
void	profit_resetparams(profitstruct *profit)
  {
   int		p;


  for (p=0; p<PARAM_NPARAM; p++)
    profit_resetparam(profit, (paramenum)p);

  return;
  }


/****** profit_setparam ****************************************************
PROTO	void profit_setparam(profitstruct *profit, paramenum paramtype,
2727
		float param, float parammin, float parammax)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2728
2729
2730
2731
2732
2733
2734
2735
PURPOSE	Set the actual, lower and upper boundary values of a profile parameter.
INPUT	Pointer to the profit structure,
	Parameter index,
	Actual value,
	Lower boundary to the parameter,
	Upper boundary to the parameter.
OUTPUT	RETURN_OK if the parameter is registered, RETURN_ERROR otherwise.
AUTHOR	E. Bertin (IAP)
2736
VERSION	15/03/2009
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2737
2738
 ***/
int	profit_setparam(profitstruct *profit, paramenum paramtype,
2739
		float param, float parammin, float parammax)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2740
  {
2741
   float	*paramptr;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2742
2743
2744
2745
2746
   int		index;

/* Check whether the parameter has already be registered */
  if ((paramptr=profit->paramlist[(int)paramtype]))
    {
2747
    index = profit->paramindex[(int)paramtype];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2748
2749
2750
2751
2752
2753
2754
2755
2756
2757
2758
    profit->paraminit[index] = param;
    profit->parammin[index] = parammin;
    profit->parammax[index] = parammax;
    return RETURN_OK;
    }
  else
    return RETURN_ERROR;
  }

  
/****** profit_boundtounbound *************************************************
2759
2760
PROTO	void profit_boundtounbound(profitstruct *profit,
				float *param, double *dparam, int index)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2761
PURPOSE	Convert parameters from bounded to unbounded space.
2762
2763
2764
2765
INPUT	Pointer to the profit structure,
	input array of single precision parameters,
	output (incomplete) array of double precision parameters,
	parameter selection index (<0 = all parameters)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2766
2767
2768
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2769
VERSION	29/03/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2770
 ***/
2771
2772
void	profit_boundtounbound(profitstruct *profit,
				float *param, double *dparam, int index)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2773
2774
  {
   double	num,den;
2775
2776
   float	tparam;
   int		f,p, pstart,np;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2777

2778
2779
2780
2781
2782
2783
2784
2785
2786
2787
2788
2789
2790
2791
  if (index<0)
    {
    pstart = 0;
    np = profit->nparam;
    }
  else
    {
    pstart = index;
    np = pstart+1;
    }

  f = 0;
  for (p=pstart ; p<np; p++)
    if (profit->freeparam_flag[p])
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2792
      {
2793
2794
2795
2796
2797
2798
2799
2800
2801
2802
2803
      tparam = param[p-pstart];
      if (profit->parammin[p]!=profit->parammax[p])
        {
        num = tparam - profit->parammin[p];
        den = profit->parammax[p] - tparam;
        dparam[f] = num>1e-50? (den>1e-50? log(num/den): 50.0) : -50.0;
        }
      else if (profit->parammax[p] > 0.0 || profit->parammax[p] < 0.0)
        dparam[f] = param[p-pstart] / profit->parammax[p];

      f++;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2804
2805
2806
2807
2808
2809
2810
      }

  return;
  }


/****** profit_unboundtobound *************************************************
2811
2812
PROTO	void profit_unboundtobound(profitstruct *profit,
				double *dparam, float *param, int index)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2813
PURPOSE	Convert parameters from unbounded to bounded space.
2814
2815
2816
2817
INPUT	Pointer to the profit structure,
	input (incomplete) array of double precision parameters,
	output array of single precision parameters.
	parameter selection index (<0 = all parameters)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2818
2819
2820
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2821
VERSION	08/07/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2822
 ***/
2823
2824
void	profit_unboundtobound(profitstruct *profit,
				double *dparam, float *param, int index)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2825
  {
2826
   int		f,p, pstart,np;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2827

2828
2829
2830
2831
2832
2833
2834
2835
2836
2837
2838
2839
2840
2841
2842
2843
2844
2845
2846
2847
2848
2849
2850
2851
2852
2853
2854
  if (index<0)
    {
    pstart = 0;
    np = profit->nparam;
    }
  else
    {
    pstart = index;
    np = pstart+1;
    }

  f = 0;
  for (p=pstart; p<np; p++)
    {
    if (profit->freeparam_flag[p])
      {
      param[p-pstart] = (profit->parammin[p]!=profit->parammax[p])?
		((profit->parammax[p] - profit->parammin[p])
		/ (1.0 + exp(-(dparam[f]>50.0? 50.0
				: (dparam[f]<-50.0? -50.0: dparam[f]))))
		+ profit->parammin[p])
		:  dparam[f]*profit->parammax[p];
      f++;
      }
    else
      param[p-pstart] = profit->paraminit[p];
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2855
2856
2857
2858
2859
2860

  return;
  }


/****** profit_covarunboundtobound ********************************************
2861
2862
PROTO	void profit_covarunboundtobound(profitstruct *profit,
				double *dcovar, float *covar)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2863
PURPOSE	Convert covariance matrix from unbounded to bounded space.
2864
2865
2866
INPUT	Pointer to the profit structure,
	input (incomplete) matrix of double precision covariances,
	output matrix of single precision covariances.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2867
2868
2869
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2870
VERSION	27/07/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2871
 ***/
2872
2873
void	profit_covarunboundtobound(profitstruct *profit,
				double *dcovar, float *covar)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2874
  {
2875
   double	*dxdy;
2876
2877
2878
   float	*x,*xmin,*xmax;
   int		*fflag,
		f,f1,f2, nfree, p,p1,p2, nparam;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2879
2880

  nparam = profit->nparam;
2881
2882
2883
  fflag = profit->freeparam_flag;
  nfree = profit->nfreeparam;
  QMALLOC16(dxdy, double, nfree);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2884
2885
2886
  x = profit->paraminit;
  xmin = profit->parammin;
  xmax = profit->parammax;
2887
  f = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2888
  for (p=0; p<profit->nparam; p++)
2889
    if (fflag[p])
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2890
      {
2891
      if (xmin[p]!=xmax[p])
2892
        dxdy[f++] = (x[p] - xmin[p]) * (xmax[p] - x[p]) / (xmax[p] - xmin[p]);
2893
2894
      else
        dxdy[f++] = xmax[p];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2895
2896
      }

2897
2898
  memset(profit->covar, 0, nparam*nparam*sizeof(float));
  f2 = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2899
  for (p2=0; p2<nparam; p2++)
2900
2901
2902
2903
2904
2905
2906
2907
2908
2909
2910
2911
2912
    {
    if (fflag[p2])
      {
      f1 = 0;
      for (p1=0; p1<nparam; p1++)
        if (fflag[p1])
          {
          covar[p2*nparam+p1] = (float)(dcovar[f2*nfree+f1]*dxdy[f1]*dxdy[f2]);
          f1++;
          }
      f2++;
      }
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2913
2914
2915
2916
2917
2918
2919
2920
2921
2922
2923
2924
2925
2926
2927

  free(dxdy);

  return;
  }


/****** prof_init *************************************************************
PROTO	profstruct prof_init(profitstruct *profit, proftypenum profcode)
PURPOSE	Allocate and initialize a new profile structure.
INPUT	Pointer to the profile-fitting structure,
	profile type.
OUTPUT	A pointer to an allocated prof structure.
NOTES	-.
AUTHOR	E. Bertin (IAP)
2928
VERSION	08/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2929
2930
2931
2932
 ***/
profstruct	*prof_init(profitstruct *profit, proftypenum profcode)
  {
   profstruct	*prof;
2933
   float	*pix,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2934
2935
2936
2937
2938
2939
2940
2941
2942
2943
2944
2945
2946
2947
		rmax2, re2, dy2,r2, scale, zero, k,n, hinvn;
   int		width,height, ixc,iyc, ix,iy, nsub,
		d,s;

  QCALLOC(prof, profstruct, 1);
  prof->code = profcode;
  switch(profcode)
    {
    case PROF_BACK:
      prof->naxis = 2;
      prof->pix = NULL;
      profit_addparam(profit, PARAM_BACK, &prof->flux);
      prof->typscale = 1.0;
      break;
2948
2949
2950
2951
2952
2953
2954
2955
2956
2957
2958
    case PROF_DIRAC:
      prof->naxis = 2;
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DIRAC_FLUX, &prof->flux);
      break;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2959
    case PROF_SERSIC:
2960
2961
2962
2963
2964
2965
      prof->naxis = 2;
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, prof->npix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2966
2967
2968
2969
2970
2971
2972
2973
2974
2975
2976
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_SPHEROID_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_SPHEROID_REFF, &prof->scale);
      profit_addparam(profit, PARAM_SPHEROID_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_SPHEROID_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_SPHEROID_SERSICN, &prof->extra[0]);
      break;
    case PROF_DEVAUCOULEURS:
      prof->naxis = 2;
2977
2978
2979
2980
2981
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2982
2983
2984
2985
2986
2987
2988
2989
2990
2991
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_SPHEROID_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_SPHEROID_REFF, &prof->scale);
      profit_addparam(profit, PARAM_SPHEROID_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_SPHEROID_POSANG, &prof->posangle);
      break;
    case PROF_EXPONENTIAL:
      prof->naxis = 2;
2992
2993
2994
2995
2996
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
2997
2998
2999
3000
3001
3002
3003
3004
3005
3006
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DISK_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_DISK_SCALE, &prof->scale);
      profit_addparam(profit, PARAM_DISK_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_DISK_POSANG, &prof->posangle);
      break;
    case PROF_ARMS:
      prof->naxis = 2;
3007
3008
3009
3010
3011
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3012
3013
3014
3015
3016
3017
3018
3019
3020
3021
3022
3023
3024
3025
3026
3027
3028
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DISK_SCALE, &prof->scale);
      profit_addparam(profit, PARAM_DISK_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_DISK_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_ARMS_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_ARMS_QUADFRAC, &prof->featfrac);
//      profit_addparam(profit, PARAM_ARMS_SCALE, &prof->featscale);
      profit_addparam(profit, PARAM_ARMS_START, &prof->featstart);
      profit_addparam(profit, PARAM_ARMS_PITCH, &prof->featpitch);
//      profit_addparam(profit, PARAM_ARMS_PITCHVAR, &prof->featpitchvar);
      profit_addparam(profit, PARAM_ARMS_POSANG, &prof->featposang);
//      profit_addparam(profit, PARAM_ARMS_WIDTH, &prof->featwidth);
      break;
    case PROF_BAR:
      prof->naxis = 2;
3029
3030
3031
3032
3033
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3034
3035
3036
3037
3038
3039
3040
3041
3042
3043
3044
3045
3046
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DISK_SCALE, &prof->scale);
      profit_addparam(profit, PARAM_DISK_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_DISK_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_ARMS_START, &prof->featstart);
      profit_addparam(profit, PARAM_BAR_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_BAR_ASPECT, &prof->feataspect);
      profit_addparam(profit, PARAM_ARMS_POSANG, &prof->featposang);
      break;
    case PROF_INRING:
      prof->naxis = 2;
3047
3048
3049
3050
3051
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3052
3053
3054
3055
3056
3057
3058
3059
3060
3061
3062
3063
3064
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DISK_SCALE, &prof->scale);
      profit_addparam(profit, PARAM_DISK_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_DISK_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_ARMS_START, &prof->featstart);
      profit_addparam(profit, PARAM_INRING_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_INRING_WIDTH, &prof->featwidth);
      profit_addparam(profit, PARAM_INRING_ASPECT, &prof->feataspect);
      break;
    case PROF_OUTRING:
      prof->naxis = 2;
3065
3066
3067
3068
3069
      prof->naxisn[0] = PROFIT_MAXMODSIZE;
      prof->naxisn[1] = PROFIT_MAXMODSIZE;
      prof->naxisn[2] = 1;
      prof->npix = prof->naxisn[0]*prof->naxisn[1]*prof->naxisn[2];
      QMALLOC(prof->pix, float, profit->nmodpix);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3070
3071
3072
3073
3074
3075
3076
3077
3078
3079
3080
3081
3082
3083
3084
      prof->typscale = 1.0;
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_DISK_SCALE, &prof->scale);
      profit_addparam(profit, PARAM_DISK_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_DISK_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_OUTRING_START, &prof->featstart);
      profit_addparam(profit, PARAM_OUTRING_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_OUTRING_WIDTH, &prof->featwidth);
      break;
    case PROF_SERSIC_TABEX:	/* An example of tabulated profile */
      prof->naxis = 3;
      width =  prof->naxisn[0] = PROFIT_PROFRES;
      height = prof->naxisn[1] = PROFIT_PROFRES;
      nsub = prof->naxisn[2] = PROFIT_PROFSRES;
3085
      QCALLOC(prof->pix, float, width*height*nsub);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3086
3087
3088
3089
3090
3091
3092
3093
3094
3095
3096
3097
3098
3099
3100
3101
3102
3103
3104
3105
3106
3107
3108
3109
3110
3111
3112
3113
3114
3115
3116
3117
3118
3119
3120
3121
3122
3123
3124
      ixc = width/2;
      iyc = height/2;
      rmax2 = (ixc - 1.0)*(ixc - 1.0);
      re2 = width/64.0;
      prof->typscale = re2;
      re2 *= re2;
      zero = prof->extrazero[0] = 0.2;
      scale = prof->extrascale[0]= 8.0/PROFIT_PROFSRES;
      pix = prof->pix;
      for (s=0; s<nsub; s++)
        {
        n = s*scale + zero;
        hinvn = 0.5/n;
        k = -1.0/3.0 + 2.0*n + 4.0/(405.0*n) + 46.0/(25515.0*n*n)
		+ 131.0/(1148175*n*n*n);
        for (iy=0; iy<height; iy++)
          {
          dy2 = (iy-iyc)*(iy-iyc);
          for (ix=0; ix<width; ix++)
            {
            r2 = dy2 + (ix-ixc)*(ix-ixc);
            *(pix++) = (r2<rmax2)? exp(-k*pow(r2/re2,hinvn)) : 0.0;
            }
          }
        }
      profit_addparam(profit, PARAM_X, &prof->x[0]);
      profit_addparam(profit, PARAM_Y, &prof->x[1]);
      profit_addparam(profit, PARAM_SPHEROID_FLUX, &prof->flux);
      profit_addparam(profit, PARAM_SPHEROID_REFF, &prof->scale);
      profit_addparam(profit, PARAM_SPHEROID_ASPECT, &prof->aspect);
      profit_addparam(profit, PARAM_SPHEROID_POSANG, &prof->posangle);
      profit_addparam(profit, PARAM_SPHEROID_SERSICN, &prof->extra[0]);
      break;
    default:
      error(EXIT_FAILURE, "*Internal Error*: Unknown profile in ",
		"prof_init()");
      break;
    }

3125
3126
3127
  QMALLOC(prof->pix, float, prof->npix);

  if (prof->naxis>2)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3128
3129
3130
3131
3132
3133
3134
3135
3136
    {
    prof->kernelnlines = 1;
    for (d=0; d<prof->naxis; d++)
      {
      prof->interptype[d] = INTERP_BILINEAR;
      prof->kernelnlines *= 
	(prof->kernelwidth[d] = interp_kernwidth[prof->interptype[d]]);
      }
    prof->kernelnlines /= prof->kernelwidth[0];
3137
    QMALLOC16(prof->kernelbuf, float, prof->kernelnlines);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3138
3139
3140
3141
3142
3143
3144
3145
3146
3147
3148
3149
3150
3151
3152
3153
3154
3155
3156
3157
3158
3159
3160
3161
3162
3163
3164
3165
3166
    }

  return prof;
  }  


/****** prof_end **************************************************************
PROTO	void prof_end(profstruct *prof)
PURPOSE	End (deallocate) a profile structure.
INPUT	Prof structure.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	09/04/2007
 ***/
void	prof_end(profstruct *prof)
  {
  if (prof->pix)
    {
    free(prof->pix);
    free(prof->kernelbuf);
    }
  free(prof);

  return;
  }


/****** prof_add **************************************************************
3167
3168
PROTO	float prof_add(profitstruct *profit, profstruct *prof,
		int extfluxfac_flag)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3169
PURPOSE	Add a model profile to an image.
3170
3171
3172
3173
INPUT	Profile-fitting structure,
	profile structure,
	flag (0 if flux correction factor is to be computed internally) 
OUTPUT	Total (asymptotic) flux contribution.
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3174
3175
NOTES	-.
AUTHOR	E. Bertin (IAP)
3176
VERSION	08/10/2010
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3177
 ***/
3178
float	prof_add(profitstruct *profit, profstruct *prof, int extfluxfac_flag)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3179
  {
3180
   double	xscale, yscale, saspect, ctheta,stheta, flux, scaling, bn, n;
3181
   float	posin[PROFIT_MAXEXTRA], posout[2], dnaxisn[2],
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3182
		*pixin, *pixin2, *pixout,
3183
		fluxfac, amp,cd11,cd12,cd21,cd22, dcd11,dcd21, dx1,dx2,
3184
		x1,x10,x2, x1cin,x2cin, x1cout,x2cout, x1max,x2max,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3185
		x1in,x2in, odx, ostep,
3186
		k, hinvn, x1t,x2t, ca,sa, u,umin,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3187
3188
		armamp,arm2amp, armrdphidr, armrdphidrvar, posang,
		width, invwidth2,
3189
3190
		r,r2,rmin, r2minxin,r2minxout, rmax, r2max,
		r2max1, r2max2, r2min, invr2xdif,
3191
		val, theta, thresh, ra,rb,rao, num,num2,den;
3192
   int		npix, noversamp, threshflag,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3193
		d,e,i, ix1,ix2, idx1,idx2, nx2, npix2;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3194

3195
  npix = profit->nmodpix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3196
3197
3198
3199
3200
3201
3202

  if (prof->code==PROF_BACK)
    {
    amp = fabs(*prof->flux);
    pixout = profit->modpix;
    for (i=npix; i--;)
      *(pixout++) += amp;
3203
3204
    prof->lostfluxfrac = 0.0;
    return 0.0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3205
3206
3207
3208
    }

  scaling = profit->pixstep / prof->typscale;

3209
3210
3211
3212
3213
3214
3215
  if (prof->code!=PROF_DIRAC)
    {
/*-- Compute Profile CD matrix */
    ctheta = cos(*prof->posangle*DEG);
    stheta = sin(*prof->posangle*DEG);
    saspect = fabs(*prof->aspect);
    xscale = (*prof->scale==0.0)?
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3216
		0.0 : fabs(scaling / (*prof->scale*prof->typscale));
3217
    yscale = (*prof->scale*saspect == 0.0)?
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3218
		0.0 : fabs(scaling / (*prof->scale*prof->typscale*saspect));
3219
3220
3221
3222
    cd11 = (float)(xscale*ctheta);
    cd12 = (float)(xscale*stheta);
    cd21 = (float)(-yscale*stheta);
    cd22 = (float)(yscale*ctheta);
3223
3224
3225
3226
3227
    dx1 = 0.0;	/* Shifting operations have been moved to profit_resample() */
    dx2 = 0.0;	/* Shifting operations have been moved to profit_resample() */

    x1cout = (float)(profit->modnaxisn[0]/2);
    x2cout = (float)(profit->modnaxisn[1]/2);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3228
    nx2 = profit->modnaxisn[1]/2 + 1;
3229
3230
3231

/*-- Compute the largest r^2 that fits in the frame */
    num = cd11*cd22-cd12*cd21;
3232
    num *= num;
3233
3234
    x1max = x1cout - 1.0;
    x2max = x2cout - 1.0;
3235
3236
3237
3238
3239
3240
3241
    den = fabs(cd12*cd12+cd22*cd22);
    num2 = x1max*x1max*num;
    r2max1 = num2<PROFIT_MAXR2MAX*den? num2 / den : PROFIT_MAXR2MAX;
    den = fabs(cd11*cd11+cd21*cd21);
    num2 = x2max*x2max*num;
    r2max2 = num2<PROFIT_MAXR2MAX*den? num2 / den : PROFIT_MAXR2MAX;
    r2max = (r2max1 < r2max2? r2max1 : r2max2);
3242
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3243
3244
3245

  switch(prof->code)
    {
3246
3247
3248
3249
3250
3251
3252
    case PROF_DIRAC:
      memset(prof->pix, 0, npix*sizeof(float));
      prof->pix[profit->modnaxisn[0]/2
		+ (profit->modnaxisn[1]/2)*profit->modnaxisn[0]] = 1.0;
      prof->lostfluxfrac = 0.0;
      threshflag = 0;
      break;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3253
3254
    case PROF_SERSIC:
      n = fabs(*prof->extra[0]);
3255
3256
3257
      bn = 2.0*n - 1.0/3.0 + 4.0/(405.0*n) + 46.0/(25515.0*n*n)
		+ 131.0/(1148175*n*n*n);	/* Ciotti & Bertin 1999 */
      k = -bn;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3258
3259
3260
3261
      hinvn = 0.5/n;
/*---- The consequence of sampling on flux is compensated by PSF normalisation*/
      x10 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3262
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3263
      for (ix2=nx2; ix2--; x2+=1.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3264
3265
3266
3267
3268
3269
3270
        {
        x1 = x10;
        for (ix1=profit->modnaxisn[0]; ix1--; x1+=1.0)
          {
          x1in = cd12*x2 + cd11*x1;
          x2in = cd22*x2 + cd21*x1;
          ra = x1in*x1in+x2in*x2in;
3271
3272
3273
3274
3275
          if (ra>r2max)
            {
            *(pixin++) = 0.0;
            continue;
            }
3276
          val = expf(k*expf(logf(ra)*hinvn));
3277
          noversamp  = (int)(val*profit->oversamp+0.1);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3278
3279
3280
3281
3282
3283
3284
3285
3286
3287
3288
3289
3290
3291
3292
3293
          if (noversamp < 2)
            *(pixin++) = val;
          else
            {
            ostep = 1.0/noversamp;
            dcd11 = cd11*ostep;
            dcd21 = cd21*ostep;
            odx = 0.5*(ostep-1.0);
            x1t = x1+odx;
            val = 0.0;
            for (idx2=noversamp; idx2--; odx+=ostep)
              {
              x1in = cd12*(x2+odx) + cd11*x1t;
              x2in = cd22*(x2+odx) + cd21*x1t;
              for (idx1=noversamp; idx1--;)
                {
3294
3295
                rao = x1in*x1in+x2in*x2in;
                val += expf(k*PROFIT_POWF(rao,hinvn));
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3296
3297
3298
3299
3300
3301
3302
3303
                x1in += dcd11;
                x2in += dcd21;
                }
              }
            *(pixin++) = val*ostep*ostep;
            }
          }
        }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3304
3305
3306
/*---- Copy the symmetric part */
      if ((npix2=(profit->modnaxisn[1]-nx2)*profit->modnaxisn[0]) > 0)
        {
3307
3308
3309
3310
3311
3312
        pixin2 = pixin - profit->modnaxisn[0] - 1;
        if (!(profit->modnaxisn[0]&1))
          {
          *(pixin++) = 0.0;
          npix2--;
          }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3313
3314
3315
        for (i=npix2; i--;)
          *(pixin++) = *(pixin2--);
        }
3316
3317
      prof->lostfluxfrac = 1.0 - prof_gammainc(2.0*n, bn*pow(r2max, hinvn));
      threshflag = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3318
3319
3320
3321
3322
      break;
    case PROF_DEVAUCOULEURS:
/*---- The consequence of sampling on flux is compensated by PSF normalisation*/
      x10 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3323
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3324
      for (ix2=nx2; ix2--; x2+=1.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3325
3326
3327
3328
3329
3330
3331
        {
        x1 = x10;
        for (ix1=profit->modnaxisn[0]; ix1--; x1+=1.0)
          {
          x1in = cd12*x2 + cd11*x1;
          x2in = cd22*x2 + cd21*x1;
          ra = x1in*x1in+x2in*x2in;
3332
3333
3334
3335
3336
3337
          if (ra>r2max)
            {
            *(pixin++) = 0.0;
            continue;
            }
          val = expf(-7.66924944f*PROFIT_POWF(ra,0.125));
3338
          noversamp  = (int)(sqrt(val)*profit->oversamp+0.1);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3339
3340
3341
3342
3343
3344
3345
3346
3347
3348
3349
3350
3351
3352
3353
3354
3355
          if (noversamp < 2)
            *(pixin++) = val;
          else
            {
            ostep = 1.0/noversamp;
            dcd11 = cd11*ostep;
            dcd21 = cd21*ostep;
            odx = 0.5*(ostep-1.0);
            x1t = x1+odx;
            val = 0.0;
            for (idx2=noversamp; idx2--; odx+=ostep)
              {
              x1in = cd12*(x2+odx) + cd11*x1t;
              x2in = cd22*(x2+odx) + cd21*x1t;
              for (idx1=noversamp; idx1--;)
                {
                ra = x1in*x1in+x2in*x2in;
3356
                val += expf(-7.66924944f*PROFIT_POWF(ra,0.125));
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3357
3358
3359
3360
3361
3362
3363
3364
                x1in += dcd11;
                x2in += dcd21;
                }
              }
            *(pixin++) = val*ostep*ostep;
            }
          }
        }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3365
3366
3367
/*---- Copy the symmetric part */
      if ((npix2=(profit->modnaxisn[1]-nx2)*profit->modnaxisn[0]) > 0)
        {
3368
3369
3370
3371
3372
3373
        pixin2 = pixin - profit->modnaxisn[0] - 1;
        if (!(profit->modnaxisn[0]&1))
          {
          *(pixin++) = 0.0;
          npix2--;
          }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3374
3375
3376
        for (i=npix2; i--;)
          *(pixin++) = *(pixin2--);
        }
3377
3378
      prof->lostfluxfrac = 1.0-prof_gammainc(8.0, 7.66924944*pow(r2max, 0.125));
      threshflag = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3379
3380
      break;
    case PROF_EXPONENTIAL:
3381
      x10 = -x1cout - dx1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3382
      x2 = -x2cout - dx2;
3383
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3384
      for (ix2=nx2; ix2--; x2+=1.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3385
        {
3386
3387
        x1 = x10;
        for (ix1=profit->modnaxisn[0]; ix1--; x1+=1.0)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3388
          {
3389
3390
3391
3392
3393
3394
3395
3396
3397
          x1in = cd12*x2 + cd11*x1;
          x2in = cd22*x2 + cd21*x1;
          ra = x1in*x1in+x2in*x2in;
          if (ra>r2max)
            {
            *(pixin++) = 0.0;
            continue;
            }
          val = expf(-sqrtf(ra));
3398
          noversamp  = (int)(val*sqrt(profit->oversamp)+0.1);
3399
3400
3401
3402
3403
3404
3405
3406
3407
3408
3409
3410
3411
3412
3413
3414
3415
3416
3417
3418
3419
3420
3421
3422
          if (noversamp < 2)
            *(pixin++) = val;
          else
            {
            ostep = 1.0/noversamp;
            dcd11 = cd11*ostep;
            dcd21 = cd21*ostep;
            odx = 0.5*(ostep-1.0);
            x1t = x1+odx;
            val = 0.0;
            for (idx2=noversamp; idx2--; odx+=ostep)
              {
              x1in = cd12*(x2+odx) + cd11*x1t;
              x2in = cd22*(x2+odx) + cd21*x1t;
              for (idx1=noversamp; idx1--;)
                {
                ra = x1in*x1in+x2in*x2in;
                val += expf(-sqrtf(ra));
                x1in += dcd11;
                x2in += dcd21;
                }
              }
            *(pixin++) = val*ostep*ostep;
            }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3423
3424
          }
        }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3425
3426
3427
/*---- Copy the symmetric part */
      if ((npix2=(profit->modnaxisn[1]-nx2)*profit->modnaxisn[0]) > 0)
        {
3428
3429
3430
3431
3432
3433
        pixin2 = pixin - profit->modnaxisn[0] - 1;
        if (!(profit->modnaxisn[0]&1))
          {
          *(pixin++) = 0.0;
          npix2--;
          }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3434
3435
3436
        for (i=npix2; i--;)
          *(pixin++) = *(pixin2--);
        }
3437
3438
3439
      rmax = sqrt(r2max);
      prof->lostfluxfrac = (1.0 + rmax)*exp(-rmax);
      threshflag = 0;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3440
3441
3442
3443
3444
3445
3446
3447
3448
3449
3450
3451
3452
3453
3454
3455
3456
3457
3458
      break;
    case PROF_ARMS:
      r2min = *prof->featstart**prof->featstart;
      r2minxin = r2min * (1.0 - PROFIT_BARXFADE) * (1.0 - PROFIT_BARXFADE);
      r2minxout = r2min * (1.0 + PROFIT_BARXFADE) * (1.0 + PROFIT_BARXFADE);
      if ((invr2xdif = (r2minxout - r2minxin)) > 0.0)
        invr2xdif = 1.0 / invr2xdif;
      else
        invr2xdif = 1.0;
      umin = 0.5*logf(r2minxin + 0.00001);
      arm2amp = *prof->featfrac;
      armamp = 1.0 - arm2amp;
      armrdphidr = 1.0/tan(*prof->featpitch*DEG);
      armrdphidrvar = 0.0 /**prof->featpitchvar*/;
      posang = *prof->featposang*DEG;
      width = fabs(*prof->featwidth);
width = 3.0;
      x1 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3459
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3460
3461
3462
3463
3464
3465
3466
3467
3468
3469
3470
3471
3472
3473
3474
3475
3476
3477
3478
3479
3480
3481
3482
3483
3484
3485
3486
3487
3488
      for (ix2=profit->modnaxisn[1]; ix2--; x2+=1.0)
        {
        x1t = cd12*x2 + cd11*x1;
        x2t = cd22*x2 + cd21*x1;
        for (ix1=profit->modnaxisn[0]; ix1--;)
          {
          r2 = x1t*x1t+x2t*x2t;
          if (r2>r2minxin)
            {
            u = 0.5*logf(r2 + 0.00001);
            theta = (armrdphidr+armrdphidrvar*(u-umin))*u+posang;
            ca = cosf(theta);
            sa = sinf(theta);
            x1in = (x1t*ca - x2t*sa);
            x2in = (x1t*sa + x2t*ca);
            amp = expf(-sqrtf(x1t*x1t+x2t*x2t));
            if (r2<r2minxout)
              amp *= (r2 - r2minxin)*invr2xdif;
            ra = x1in*x1in/r2;
            rb = x2in*x2in/r2;
            *(pixin++) = amp * (armamp*PROFIT_POWF(ra,width)
				+ arm2amp*PROFIT_POWF(rb,width));
            }
          else
            *(pixin++) = 0.0;
          x1t += cd11;
          x2t += cd21; 
         }
        }
3489
3490
      prof->lostfluxfrac = 0.0;
      threshflag = 1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3491
3492
3493
3494
3495
3496
3497
3498
3499
3500
3501
3502
3503
3504
3505
      break;
    case PROF_BAR:
      r2min = *prof->featstart**prof->featstart;
      r2minxin = r2min * (1.0 - PROFIT_BARXFADE) * (1.0 - PROFIT_BARXFADE);
      r2minxout = r2min * (1.0 + PROFIT_BARXFADE) * (1.0 + PROFIT_BARXFADE);
      if ((invr2xdif = (r2minxout - r2minxin)) > 0.0)
        invr2xdif = 1.0 / invr2xdif;
      else
        invr2xdif = 1.0;
      invwidth2 = fabs(1.0 / (*prof->featstart**prof->feataspect));
      posang = *prof->featposang*DEG;
      ca = cosf(posang);
      sa = sinf(posang);
      x1 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3506
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3507
3508
3509
3510
3511
3512
3513
3514
3515
3516
3517
3518
3519
3520
3521
3522
3523
3524
3525
3526
3527
      for (ix2=profit->modnaxisn[1]; ix2--; x2+=1.0)
        {
        x1t = cd12*x2 + cd11*x1;
        x2t = cd22*x2 + cd21*x1;
        for (ix1=profit->modnaxisn[0]; ix1--;)
          {
          r2 = x1t*x1t+x2t*x2t;
          if (r2<r2minxout)
            {
            x1in = x1t*ca - x2t*sa;
            x2in = invwidth2*(x1t*sa + x2t*ca);
            *(pixin++) = (r2>r2minxin) ?
				(r2minxout - r2)*invr2xdif*expf(-x2in*x2in)
				: expf(-x2in*x2in);
            }
          else
            *(pixin++) = 0.0;
          x1t += cd11;
          x2t += cd21;
          }
        }
3528
3529
      prof->lostfluxfrac = 0.0;
      threshflag = 1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3530
3531
3532
3533
3534
3535
3536
3537
3538
3539
3540
3541
3542
3543
      break;
    case PROF_INRING:
      rmin = *prof->featstart;
      r2minxin = *prof->featstart-4.0**prof->featwidth;
      if (r2minxin < 0.0)
        r2minxin = 0.0;
      r2minxin *= r2minxin;
      r2minxout = *prof->featstart+4.0**prof->featwidth;
      r2minxout *= r2minxout;
      invwidth2 = 0.5 / (*prof->featwidth**prof->featwidth);
      cd22 /= *prof->feataspect;
      cd21 /= *prof->feataspect;
      x1 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3544
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3545
3546
3547
3548
3549
3550
3551
3552
3553
3554
3555
3556
3557
3558
3559
3560
3561
3562
      for (ix2=profit->modnaxisn[1]; ix2--; x2+=1.0)
        {
        x1t = cd12*x2 + cd11*x1;
        x2t = cd22*x2 + cd21*x1;
        for (ix1=profit->modnaxisn[0]; ix1--;)
          {
          r2 = x1t*x1t+x2t*x2t;
          if (r2>r2minxin && r2<r2minxout)
            {
            r = sqrt(r2) - rmin;
            *(pixin++) = expf(-invwidth2*r*r);
            }
          else
            *(pixin++) = 0.0;
          x1t += cd11;
          x2t += cd21;
          }
        }
3563
3564
      prof->lostfluxfrac = 0.0;
      threshflag = 1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3565
3566
3567
3568
3569
3570
3571
3572
3573
3574
3575
3576
      break;
    case PROF_OUTRING:
      rmin = *prof->featstart;
      r2minxin = *prof->featstart-4.0**prof->featwidth;
      if (r2minxin < 0.0)
        r2minxin = 0.0;
      r2minxin *= r2minxin;
      r2minxout = *prof->featstart+4.0**prof->featwidth;
      r2minxout *= r2minxout;
      invwidth2 = 0.5 / (*prof->featwidth**prof->featwidth);
      x1 = -x1cout - dx1;
      x2 = -x2cout - dx2;
3577
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3578
3579
3580
3581
3582
3583
3584
3585
3586
3587
3588
3589
3590
3591
3592
3593
3594
3595
      for (ix2=profit->modnaxisn[1]; ix2--; x2+=1.0)
        {
        x1t = cd12*x2 + cd11*x1;
        x2t = cd22*x2 + cd21*x1;
        for (ix1=profit->modnaxisn[0]; ix1--;)
          {
          r2 = x1t*x1t+x2t*x2t;
          if (r2>r2minxin && r2<r2minxout)
            {
            r = sqrt(r2) - rmin;
            *(pixin++) = expf(-invwidth2*r*r);
            }
          else
            *(pixin++) = 0.0;
          x1t += cd11;
          x2t += cd21;
          }
        }
3596
3597
      prof->lostfluxfrac = 0.0;
      threshflag = 1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3598
3599
3600
3601
3602
3603
3604
3605
3606
3607
3608
3609
3610
3611
3612
3613
3614
3615
3616
      break;
    default:
/*---- Tabulated profile: remap each pixel */
/*---- Initialize multi-dimensional counters */
     for (d=0; d<2; d++)
        {
        posout[d] = 1.0;	/* FITS convention */
        dnaxisn[d] = profit->modnaxisn[d] + 0.99999;
        }

      for (e=0; e<prof->naxis - 2; e++)
        {
        d = 2+e;
/*------ Compute position along axis */
        posin[d] = (*prof->extra[e]-prof->extrazero[e])/prof->extrascale[e]+1.0;
/*------ Keep position within boundaries and let interpolation do the rest */
        if (posin[d] < 0.99999)
          {
          if (prof->extracycleflag[e])
3617
            posin[d] += (float)prof->naxisn[d];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3618
3619
3620
          else
            posin[d] = 1.0;
          }
3621
        else if (posin[d] > (float)prof->naxisn[d])
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3622
3623
3624
          {
          if (prof->extracycleflag[e])
          posin[d] = (prof->extracycleflag[e])?
3625
3626
		  fmod(posin[d], (float)prof->naxisn[d])
		: (float)prof->naxisn[d];
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3627
3628
          }
        }
3629
3630
      x1cin = (float)(prof->naxisn[0]/2);
      x2cin = (float)(prof->naxisn[1]/2);
3631
      pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3632
3633
3634
3635
3636
3637
3638
3639
3640
3641
3642
3643
3644
      for (i=npix; i--;)
        {
        x1 = posout[0] - x1cout - 1.0 - dx1;
        x2 = posout[1] - x2cout - 1.0 - dx2;
        posin[0] = cd11*x1 + cd12*x2 + x1cin + 1.0;
        posin[1] = cd21*x1 + cd22*x2 + x2cin + 1.0;
        *(pixin++) = prof_interpolate(prof, posin);
        for (d=0; d<2; d++)
          if ((posout[d]+=1.0) < dnaxisn[d])
            break;
          else
            posout[d] = 1.0;
        }
3645
3646
      prof->lostfluxfrac = 0.0;
      threshflag = 1;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3647
3648
3649
    break;
    }

3650
3651
3652
3653
3654
3655
3656
3657
3658
3659
3660
3661
3662
3663
3664
3665
3666
/* For complex profiles, threshold to the brightest pixel value at border */
  if (threshflag)
    {
/*-- Now find truncation threshold */
/*-- Find the shortest distance to a vignet border */
    rmax = x1cout;
    if (rmax > (r = x2cout))
      rmax = r;
    rmax += 0.01;
    if (rmax<1.0)
      rmax = 1.0;
    r2max = rmax*rmax;
    rmin = rmax - 1.0;
    r2min = rmin*rmin;

/*-- Find best threshold (the max around the circle with radius rmax */
    dx2 = -x2cout;
3667
    pixin = prof->pix;
3668
3669
3670
3671
3672
3673
3674
3675
    thresh = -BIG;
    for (ix2=profit->modnaxisn[1]; ix2--; dx2 += 1.0)
      {
      dx1 = -x1cout;
      for (ix1=profit->modnaxisn[0]; ix1--; dx1 += 1.0)
        if ((val=*(pixin++))>thresh && (r2=dx1*dx1+dx2*dx2)>r2min && r2<r2max)
          thresh = val;
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3676

3677
3678
/*-- Threshold and measure the flux */
    flux = 0.0;
3679
    pixin = prof->pix;
3680
3681
3682
3683
3684
3685
3686
    for (i=npix; i--; pixin++)
      if (*pixin >= thresh)
        flux += (double)*pixin;
      else
        *pixin = 0.0;
    }
  else
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3687
    {
3688
    flux = 0.0;
3689
    pixin = prof->pix;
3690
3691
    for (i=npix; i--;)
      flux += (double)*(pixin++);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3692
3693
    }

3694
3695
3696
3697
3698
3699
3700
3701
3702
3703
3704
3705
3706
  if (extfluxfac_flag)
    fluxfac = prof->fluxfac;
  else
    {
    if (prof->lostfluxfrac < 1.0)
      flux /= (1.0 - prof->lostfluxfrac);

    prof->fluxfac = fluxfac = fabs(flux)>0.0? profit->fluxfac/flux : 0.0;
    }

  pixin = prof->pix;
  for (i=npix; i--;)
    *(pixin++) *= fluxfac;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3707
3708

/* Correct final flux */
3709
3710
  fluxfac = *prof->flux;
  pixin = prof->pix;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3711
  pixout = profit->modpix;
3712
  for (i=npix; i--;)
3713
    *(pixout++) += fluxfac**(pixin++);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3714

3715
  return *prof->flux;
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3716
3717
3718
  }


3719
/****** prof_moments **********************************************************
3720
3721
PROTO	int	prof_moments(profitstruct *profit, profstruct *prof)
PURPOSE	Computes (analytically or numerically) the 2nd moments of a profile.
3722
INPUT	Profile-fitting structure,
3723
3724
3725
3726
	profile structure,
	optional pointer to 3xnparam Jacobian matrix.
OUTPUT	Index to the profile flux for further processing.
NOTES	.
3727
AUTHOR	E. Bertin (IAP)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3728
VERSION	20/08/2010
3729
 ***/
3730
int	prof_moments(profitstruct *profit, profstruct *prof, double *jac)
3731
  {
3732
3733
3734
3735
   double	*dmx2,*dmy2,*dmxy,
		m20, a2, ct,st, mx2fac, my2fac,mxyfac, dc2,ds2,dcs,
		bn,bn2, n,n2, nfac,nfac2, hscale2, dmdn;
   int		nparam, index;
3736

3737
3738
3739
3740
3741
3742
3743
3744
3745
  if (jac)
/*-- Clear output Jacobian */
    {
    nparam = profit->nparam;
    memset(jac, 0, nparam*3*sizeof(double));
    dmx2 = jac;
    dmy2 = jac + nparam;
    dmxy = jac + 2*nparam;
    }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3746
3747
3748
3749
3750
3751
3752
  else
    dmx2 = dmy2 = dmxy = NULL;		/* To avoid gcc -Wall warnings */

  m20 = 0.0;				/* to avoid gcc -Wall warnings */
  index = 0;				/* to avoid gcc -Wall warnings */


3753
3754
  if (prof->posangle)
    {
3755
3756
3757
3758
3759
3760
3761
3762
3763
3764
3765
3766
    a2 = *prof->aspect**prof->aspect;
    ct = cos(*prof->posangle*DEG);
    st = sin(*prof->posangle*DEG);
    mx2fac = ct*ct + st*st*a2;
    my2fac = st*st + ct*ct*a2;
    mxyfac = ct*st * (1.0 - a2);
    if (jac)
      {
      dc2 = -2.0*ct*st*DEG;
      ds2 =  2.0*ct*st*DEG;
      dcs = (ct*ct - st*st)*DEG;
      }
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3767
3768
    else
      dc2 = ds2 = dcs = 0.0;		/* To avoid gcc -Wall warnings */
3769
3770
3771
3772
3773
3774
    switch(prof->code)
      {
      case PROF_SERSIC:
        n = fabs(*prof->extra[0]);
        bn = 2.0*n - 1.0/3.0 + 4.0/(405.0*n) + 46.0/(25515.0*n*n)
		+ 131.0/(1148175*n*n*n);	/* Ciotti & Bertin 1999 */
3775
3776
3777
3778
3779
3780
3781
3782
3783
3784
3785
3786
3787
3788
3789
3790
3791
3792
3793
3794
3795
3796
3797
3798
3799
3800
3801
3802
3803
3804
        nfac  = prof_gamma(4.0*n) / (prof_gamma(2.0*n)*pow(bn, 2.0*n));
        hscale2 = 0.5 * *prof->scale**prof->scale;
        m20 = hscale2 * nfac;
        if (jac)
          {
          dmx2[profit->paramindex[PARAM_SPHEROID_REFF]]
			= *prof->scale * nfac * mx2fac;
          dmy2[profit->paramindex[PARAM_SPHEROID_REFF]]
			= *prof->scale * nfac * my2fac;
          dmxy[profit->paramindex[PARAM_SPHEROID_REFF]]
			= *prof->scale * nfac * mxyfac;
          n2 = n+0.01;
          bn2 = 2.0*n2 - 1.0/3.0 + 4.0/(405.0*n2) + 46.0/(25515.0*n2*n2)
		+ 131.0/(1148175*n2*n2*n2);	/* Ciotti & Bertin 1999 */
          nfac2 = prof_gamma(4.0*n2) / (prof_gamma(2.0*n2)*pow(bn2, 2.0*n2));
          dmdn = 100.0 * hscale2 * (nfac2-nfac);
          dmx2[profit->paramindex[PARAM_SPHEROID_SERSICN]] = dmdn * mx2fac;
          dmy2[profit->paramindex[PARAM_SPHEROID_SERSICN]] = dmdn * my2fac;
          dmxy[profit->paramindex[PARAM_SPHEROID_SERSICN]] = dmdn * mxyfac;
          dmx2[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= 2.0 * m20 * st*st * *prof->aspect;
          dmy2[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= 2.0 * m20 * ct*ct * *prof->aspect;
          dmxy[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= -2.0 * m20 * ct*st * *prof->aspect;
          dmx2[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (dc2+ds2*a2);
          dmy2[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (ds2+dc2*a2);
          dmxy[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (1.0-a2)*dcs;
          }
        index = profit->paramindex[PARAM_SPHEROID_FLUX];
3805
3806
3807
        break; 
      case PROF_DEVAUCOULEURS:
        m20 = 10.83995 * *prof->scale**prof->scale;
3808
3809
3810
3811
3812
3813
3814
3815
3816
3817
3818
3819
3820
3821
3822
3823
3824
3825
3826
        if (jac)
          {
          dmx2[profit->paramindex[PARAM_SPHEROID_REFF]]
			= 21.680 * *prof->scale * mx2fac;
          dmy2[profit->paramindex[PARAM_SPHEROID_REFF]]
			= 21.680 * *prof->scale * my2fac;
          dmxy[profit->paramindex[PARAM_SPHEROID_REFF]]
			= 21.680 * *prof->scale * mxyfac;
          dmx2[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= 2.0 * m20 * st*st * *prof->aspect;
          dmy2[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= 2.0 * m20 * ct*ct * *prof->aspect;
          dmxy[profit->paramindex[PARAM_SPHEROID_ASPECT]]
			= -2.0 * m20 * ct*st * *prof->aspect;
          dmx2[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (dc2+ds2*a2);
          dmy2[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (ds2+dc2*a2);
          dmxy[profit->paramindex[PARAM_SPHEROID_POSANG]] = m20 * (1.0-a2)*dcs;
          }
        index = profit->paramindex[PARAM_SPHEROID_FLUX];
3827
3828
3829
        break;
      case PROF_EXPONENTIAL:
        m20 = 3.0 * *prof->scale**prof->scale;
3830
3831
3832
3833
3834
3835
3836
3837
3838
3839
3840
3841
3842
3843
3844
3845
3846
3847
3848
        if (jac)
          {
          dmx2[profit->paramindex[PARAM_DISK_SCALE]]
			= 6.0 * *prof->scale * mx2fac;
          dmy2[profit->paramindex[PARAM_DISK_SCALE]]
			= 6.0 * *prof->scale * my2fac;
          dmxy[profit->paramindex[PARAM_DISK_SCALE]]
			= 6.0 * *prof->scale * mxyfac;
          dmx2[profit->paramindex[PARAM_DISK_ASPECT]]
			= 2.0 * m20 * st*st * *prof->aspect;
          dmy2[profit->paramindex[PARAM_DISK_ASPECT]]
			= 2.0 * m20 * ct*ct * *prof->aspect;
          dmxy[profit->paramindex[PARAM_DISK_ASPECT]]
			= -2.0 * m20 * ct*st * *prof->aspect;
          dmx2[profit->paramindex[PARAM_DISK_POSANG]] = m20 * (dc2 + ds2*a2);
          dmy2[profit->paramindex[PARAM_DISK_POSANG]] = m20 * (ds2 + dc2*a2);
          dmxy[profit->paramindex[PARAM_DISK_POSANG]] = m20 * (1.0 - a2) * dcs;
          }
        index = profit->paramindex[PARAM_DISK_FLUX];
3849
3850
        break;
      case PROF_ARMS:
3851
3852
3853
        m20 = 1.0;
        index = profit->paramindex[PARAM_ARMS_FLUX];
        break;
3854
      case PROF_BAR:
3855
3856
3857
        m20 = 1.0;
        index = profit->paramindex[PARAM_BAR_FLUX];
        break;
3858
      case PROF_INRING:
3859
3860
3861
        m20 = 1.0;
        index = profit->paramindex[PARAM_INRING_FLUX];
        break;
3862
      case PROF_OUTRING:
3863
3864
        m20 = 1.0;
        index = profit->paramindex[PARAM_OUTRING_FLUX];
3865
3866
3867
3868
3869
3870
3871
        break;
      default:
        error(EXIT_FAILURE, "*Internal Error*: Unknown oriented model in ",
		"prof_moments()");
      break;
      }

3872
3873
3874
3875
    prof->mx2 = m20*mx2fac;
    prof->my2 = m20*my2fac;
    prof->mxy = m20*mxyfac;
    
3876
3877
3878
3879
    }
  else
    prof->mx2 = prof->my2 = prof->mxy = 0.0;

3880
  return index;
3881
3882
3883
  }


Emmanuel Bertin's avatar
Emmanuel Bertin committed
3884
/****** prof_interpolate ******************************************************
3885
PROTO	float	prof_interpolate(profstruct *prof, float *posin)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3886
3887
3888
3889
3890
3891
3892
3893
PURPOSE	Interpolate a multidimensional model profile at a given position.
INPUT	Profile structure,
	input position vector.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	10/12/2006
 ***/
3894
static float	prof_interpolate(profstruct *prof, float *posin)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3895
  {
3896
   float		dpos[2+PROFIT_MAXEXTRA],
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3897
3898
3899
3900
3901
3902
3903
3904
3905
3906
3907
3908
3909
3910
3911
3912
3913
3914
3915
3916
3917
3918
3919
3920
3921
3922
3923
3924
3925
3926
3927
3928
3929
3930
3931
3932
3933
3934
3935
3936
3937
3938
3939
3940
3941
3942
3943
3944
3945
3946
3947
3948
3949
3950
3951
3952
3953
3954
3955
3956
3957
3958
3959
3960
3961
3962
3963
3964
3965
3966
3967
3968
3969
3970
3971
3972
3973
3974
3975
3976
3977
3978
			kernel_vector[INTERP_MAXKERNELWIDTH],
			*kvector, *pixin,*pixout,
			val;
   long			step[2+PROFIT_MAXEXTRA],
			start, fac;
   int			linecount[2+PROFIT_MAXEXTRA],
			*naxisn,
			i,j,n, ival, nlines, kwidth,width, badpixflag, naxis;

  naxis = prof->naxis;
  naxisn = prof->naxisn;
  start = 0;
  fac = 1;
  for (n=0; n<naxis; n++)
    {
    val = *(posin++);
    width = *(naxisn++);
/*-- Get the integer part of the current coordinate or nearest neighbour */
    ival = (prof->interptype[n]==INTERP_NEARESTNEIGHBOUR)?
                                        (int)(val-0.50001):(int)val;
/*-- Store the fractional part of the current coordinate */
    dpos[n] = val - ival;
/*-- Check if interpolation start/end exceed image boundary... */
    kwidth = prof->kernelwidth[n];
    ival-=kwidth/2;
    if (ival<0 || ival+kwidth<=0 || ival+kwidth>width)
      return 0.0;

/*-- Update starting pointer */
    start += ival*fac;
/*-- Update step between interpolated regions */
    step[n] = fac*(width-kwidth);
    linecount[n] = 0.0;
    fac *= width;
    }

/* Update Interpolation kernel vectors */
  make_kernel(*dpos, kernel_vector, prof->interptype[0]);
  kwidth = prof->kernelwidth[0];
  nlines = prof->kernelnlines;
/* First step: interpolate along NAXIS1 from the data themselves */
  badpixflag = 0;
  pixin = prof->pix+start;
  pixout = prof->kernelbuf;
  for (j=nlines; j--;)
    {
    val = 0.0;
    kvector = kernel_vector;
    for (i=kwidth; i--;)
       val += *(kvector++)**(pixin++);
    *(pixout++) = val;
    for (n=1; n<naxis; n++)
      {
      pixin+=step[n-1];
      if (++linecount[n]<prof->kernelwidth[n])
        break;
      else
        linecount[n] = 0;       /* No need to initialize it to 0! */
      }
    }

/* Second step: interpolate along other axes from the interpolation buffer */
  for (n=1; n<naxis; n++)
    {
    make_kernel(dpos[n], kernel_vector, prof->interptype[n]);
    kwidth = prof->kernelwidth[n];
    pixout = pixin = prof->kernelbuf;
    for (j = (nlines/=kwidth); j--;)
      {
      val = 0.0;
      kvector = kernel_vector;
      for (i=kwidth; i--;)
        val += *(kvector++)**(pixin++);
      *(pixout++) = val;
     }
    }

  return prof->kernelbuf[0];
  }


/****** interpolate_pix ******************************************************
3979
PROTO	void interpolate_pix(float *posin, float *pix, int naxisn,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3980
3981
3982
3983
3984
3985
3986
3987
3988
3989
3990
		interpenum interptype)
PURPOSE	Interpolate a model profile at a given position.
INPUT	Profile structure,
	input position vector,
	input pixmap dimension vector,
	interpolation type.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
VERSION	07/12/2006
 ***/
3991
static float	interpolate_pix(float *posin, float *pix, int *naxisn,
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3992
3993
			interpenum interptype)
  {
3994
   float	buffer[INTERP_MAXKERNELWIDTH],
Emmanuel Bertin's avatar
Emmanuel Bertin committed
3995
3996
3997
3998
3999
4000
4001
4002
4003
4004
4005
4006
4007
4008
4009
4010
4011
4012
4013
4014
4015
4016
4017
4018
4019
4020
4021
4022
4023
4024
4025
4026
4027
4028
4029
4030
4031
4032
4033
4034
4035
4036
4037
4038
4039
4040
4041
4042
4043
4044
4045
4046
4047
4048
4049
		kernel[INTERP_MAXKERNELWIDTH], dpos[2],
		*kvector, *pixin, *pixout,
		val;
   int		fac, ival, kwidth, start, width, step,
		i,j, n;

  kwidth = interp_kernwidth[interptype];
  start = 0;
  fac = 1;
  for (n=0; n<2; n++)
    {
    val = *(posin++);
    width = naxisn[n];
/*-- Get the integer part of the current coordinate or nearest neighbour */
    ival = (interptype==INTERP_NEARESTNEIGHBOUR)? (int)(val-0.50001):(int)val;
/*-- Store the fractional part of the current coordinate */
    dpos[n] = val - ival;
/*-- Check if interpolation start/end exceed image boundary... */
    ival-=kwidth/2;
    if (ival<0 || ival+kwidth<=0 || ival+kwidth>width)
      return 0.0;
/*-- Update starting pointer */
    start += ival*fac;
/*-- Update step between interpolated regions */
    fac *= width;
    }

/* First step: interpolate along NAXIS1 from the data themselves */
  make_kernel(dpos[0], kernel, interptype);
  step = naxisn[0]-kwidth;
  pixin = pix+start;
  pixout = buffer;
  for (j=kwidth; j--;)
    {
    val = 0.0;
    kvector = kernel;
    for (i=kwidth; i--;)
      val += *(kvector++)**(pixin++);
    *(pixout++) = val;
    pixin += step;
    }

/* Second step: interpolate along NAXIS2 from the interpolation buffer */
  make_kernel(dpos[1], kernel, interptype);
  pixin = buffer;
  val = 0.0;
  kvector = kernel;
  for (i=kwidth; i--;)
    val += *(kvector++)**(pixin++);

  return val;
  }


/****** make_kernel **********************************************************
4050
PROTO	void make_kernel(float pos, float *kernel, interpenum interptype)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4051
4052
4053
4054
4055
4056
4057
PURPOSE	Conpute interpolation-kernel data
INPUT	Position,
	Pointer to the output kernel data,
	Interpolation method.
OUTPUT	-.
NOTES	-.
AUTHOR	E. Bertin (IAP)
4058
VERSION	07/09/2009
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4059
 ***/
4060
void	make_kernel(float pos, float *kernel, interpenum interptype)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4061
  {
4062
   float	x, val, sinx1,sinx2,sinx3,cosx1;
4063

Emmanuel Bertin's avatar
Emmanuel Bertin committed
4064
4065
4066
4067
4068
4069
4070
4071
4072
  if (interptype == INTERP_NEARESTNEIGHBOUR)
    *kernel = 1;
  else if (interptype == INTERP_BILINEAR)
    {
    *(kernel++) = 1.0-pos;
    *kernel = pos;
    }
  else if (interptype == INTERP_LANCZOS2)
    {
4073
    if (pos<1e-5 && pos>-1e-5)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4074
4075
4076
4077
4078
4079
4080
4081
4082
      {
      *(kernel++) = 0.0;
      *(kernel++) = 1.0;
      *(kernel++) = 0.0;
      *kernel = 0.0;
      }
    else
      {
      x = -PI/2.0*(pos+1.0);
4083
#ifdef HAVE_SINCOSF
4084
      sincosf(x, &sinx1, &cosx1);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4085
#else
4086
4087
      sinx1 = sinf(x);
      cosx1 = cosf(x);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4088
4089
4090
4091
4092
4093
4094
4095
4096
4097
4098
4099
4100
4101
4102
4103
4104
#endif
      val = (*(kernel++) = sinx1/(x*x));
      x += PI/2.0;
      val += (*(kernel++) = -cosx1/(x*x));
      x += PI/2.0;
      val += (*(kernel++) = -sinx1/(x*x));
      x += PI/2.0;
      val += (*kernel = cosx1/(x*x));
      val = 1.0/val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *kernel *= val;
      }
    }
  else if (interptype == INTERP_LANCZOS3)
    {
4105
    if (pos<1e-5 && pos>-1e-5)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4106
4107
4108
4109
4110
4111
4112
4113
4114
4115
4116
4117
      {
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *(kernel++) = 1.0;
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *kernel = 0.0;
      }
    else
      {
      x = -PI/3.0*(pos+2.0);
#ifdef HAVE_SINCOS
4118
      sincosf(x, &sinx1, &cosx1);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4119
#else
4120
4121
      sinx1 = sinf(x);
      cosx1 = cosf(x);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4122
4123
4124
4125
4126
4127
4128
4129
4130
4131
4132
4133
4134
4135
4136
4137
4138
4139
4140
4141
4142
4143
4144
4145
4146
#endif
      val = (*(kernel++) = sinx1/(x*x));
      x += PI/3.0;
      val += (*(kernel++) = (sinx2=-0.5*sinx1-0.866025403785*cosx1)
				/ (x*x));
      x += PI/3.0;
      val += (*(kernel++) = (sinx3=-0.5*sinx1+0.866025403785*cosx1)
				/(x*x));
      x += PI/3.0;
      val += (*(kernel++) = sinx1/(x*x));
      x += PI/3.0;
      val += (*(kernel++) = sinx2/(x*x));
      x += PI/3.0;
      val += (*kernel = sinx3/(x*x));
      val = 1.0/val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *kernel *= val;
      }
    }
  else if (interptype == INTERP_LANCZOS4)
    {
4147
    if (pos<1e-5 && pos>-1e-5)
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4148
4149
4150
4151
4152
4153
4154
4155
4156
4157
4158
4159
4160
4161
      {
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *(kernel++) = 1.0;
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *(kernel++) = 0.0;
      *kernel = 0.0;
      }
    else
      {
      x = -PI/4.0*(pos+3.0);
#ifdef HAVE_SINCOS
4162
      sincosf(x, &sinx1, &cosx1);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4163
#else
4164
4165
      sinx1 = sinf(x);
      cosx1 = cosf(x);
Emmanuel Bertin's avatar
Emmanuel Bertin committed
4166
4167
4168
4169
4170
4171
4172
4173
4174
4175
4176
4177
4178
4179
4180
4181
4182
4183
4184
4185
4186
4187
4188
4189
4190
4191
4192
4193
4194
4195
4196
4197
4198
4199
4200
#endif
      val = (*(kernel++) = sinx1/(x*x));
      x += PI/4.0;
      val +=(*(kernel++) = -(sinx2=0.707106781186*(sinx1+cosx1))
				/(x*x));
      x += PI/4.0;
      val += (*(kernel++) = cosx1/(x*x));
      x += PI/4.0;
      val += (*(kernel++) = -(sinx3=0.707106781186*(cosx1-sinx1))/(x*x));
      x += PI/4.0;
      val += (*(kernel++) = -sinx1/(x*x));
      x += PI/4.0;
      val += (*(kernel++) = sinx2/(x*x));
      x += PI/4.0;
      val += (*(kernel++) = -cosx1/(x*x));
      x += PI/4.0;
      val += (*kernel = sinx3/(x*x));
      val = 1.0/val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *(kernel--) *= val;
      *kernel *= val;
      }
    }
  else
    error(EXIT_FAILURE, "*Internal Error*: Unknown interpolation type in ",
		"make_kernel()");

  return;
  }