Commit 54bca520 authored by Emmanuel Bertin's avatar Emmanuel Bertin
Browse files

Fixed FLUX_HYBRID and MAG_HYBRID centering issues.

Added 2nd order moments measurements of the convolved model.
Fixed issues introduced in a recent updates with check-images.
Implemented new algorithms for SPREAD_MODEL and SPREADERR_MODEL (no optimization yet and the scaling is still variable however).
Added experimental SNR_WIN measurement parameter.
Fixed crash with empty ASSOC lists.
Pushed version number to 2.13.6.
parent 1b0fb5bd
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+10 −10
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#! /bin/sh
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
# Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.63 for sextractor 2.13.2.
# Generated by GNU Autoconf 2.63 for sextractor 2.13.6.
#
#
# Report bugs to <bertin@iap.fr>.
# Report bugs to <bertin@iap.fr>.
#
#
@@ -750,8 +750,8 @@ SHELL=${CONFIG_SHELL-/bin/sh}
# Identity of this package.
# Identity of this package.
PACKAGE_NAME='sextractor'
PACKAGE_NAME='sextractor'
PACKAGE_TARNAME='sextractor'
PACKAGE_TARNAME='sextractor'
PACKAGE_VERSION='2.13.2'
PACKAGE_VERSION='2.13.6'
PACKAGE_STRING='sextractor 2.13.2'
PACKAGE_STRING='sextractor 2.13.6'
PACKAGE_BUGREPORT='bertin@iap.fr'
PACKAGE_BUGREPORT='bertin@iap.fr'
ac_unique_file="src/makeit.c"
ac_unique_file="src/makeit.c"
@@ -1508,7 +1508,7 @@ if test "$ac_init_help" = "long"; then
  # Omit some internal or obsolete options to make the list less imposing.
  # Omit some internal or obsolete options to make the list less imposing.
  # This message is too long to be a string in the A/UX 3.1 sh.
  # This message is too long to be a string in the A/UX 3.1 sh.
  cat <<_ACEOF
  cat <<_ACEOF
\`configure' configures sextractor 2.13.2 to adapt to many kinds of systems.
\`configure' configures sextractor 2.13.6 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
Usage: $0 [OPTION]... [VAR=VALUE]...
@@ -1578,7 +1578,7 @@ fi
if test -n "$ac_init_help"; then
if test -n "$ac_init_help"; then
  case $ac_init_help in
  case $ac_init_help in
     short | recursive ) echo "Configuration of sextractor 2.13.2:";;
     short | recursive ) echo "Configuration of sextractor 2.13.6:";;
   esac
   esac
  cat <<\_ACEOF
  cat <<\_ACEOF
@@ -1711,7 +1711,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
if $ac_init_version; then
  cat <<\_ACEOF
  cat <<\_ACEOF
sextractor configure 2.13.2
sextractor configure 2.13.6
generated by GNU Autoconf 2.63
generated by GNU Autoconf 2.63
Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
@@ -1725,7 +1725,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
running configure, to aid debugging if configure makes a mistake.
It was created by sextractor $as_me 2.13.2, which was
It was created by sextractor $as_me 2.13.6, which was
generated by GNU Autoconf 2.63.  Invocation command line was
generated by GNU Autoconf 2.63.  Invocation command line was
  $ $0 $@
  $ $0 $@
@@ -2428,7 +2428,7 @@ fi
# Define the identity of the package.
# Define the identity of the package.
 PACKAGE='sextractor'
 PACKAGE='sextractor'
 VERSION='2.13.2'
 VERSION='2.13.6'
cat >>confdefs.h <<_ACEOF
cat >>confdefs.h <<_ACEOF
@@ -28593,7 +28593,7 @@ exec 6>&1
# report actual input values of CONFIG_FILES etc. instead of their
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
# values after options handling.
ac_log="
ac_log="
This file was extended by sextractor $as_me 2.13.2, which was
This file was extended by sextractor $as_me 2.13.6, which was
generated by GNU Autoconf 2.63.  Invocation command line was
generated by GNU Autoconf 2.63.  Invocation command line was
  CONFIG_FILES    = $CONFIG_FILES
  CONFIG_FILES    = $CONFIG_FILES
@@ -28656,7 +28656,7 @@ Report bugs to <bug-autoconf@gnu.org>."
_ACEOF
_ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_version="\\
ac_cs_version="\\
sextractor config.status 2.13.2
sextractor config.status 2.13.6
configured by $0, generated by GNU Autoconf 2.63,
configured by $0, generated by GNU Autoconf 2.63,
  with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
  with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
+2 −2
Original line number Original line Diff line number Diff line
@@ -22,7 +22,7 @@
#	You should have received a copy of the GNU General Public License
#	You should have received a copy of the GNU General Public License
#	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
#	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
#
#
#	Last modified:		24/01/2011
#	Last modified:		03/05/2011
#
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%


@@ -31,7 +31,7 @@ define([AC_CACHE_LOAD],)
define([AC_CACHE_SAVE],)
define([AC_CACHE_SAVE],)


# This is your standard Bertin source code...
# This is your standard Bertin source code...
AC_INIT(sextractor, 2.13.2, [bertin@iap.fr])
AC_INIT(sextractor, 2.13.6, [bertin@iap.fr])
AC_CONFIG_SRCDIR(src/makeit.c)
AC_CONFIG_SRCDIR(src/makeit.c)
AC_CONFIG_AUX_DIR(autoconf)
AC_CONFIG_AUX_DIR(autoconf)
AM_CONFIG_HEADER(config.h)
AM_CONFIG_HEADER(config.h)
+1 −1
Original line number Original line Diff line number Diff line
.TH SEXTRACTOR "1" "March 2011" "SExtractor 2.13.2" "User Commands"
.TH SEXTRACTOR "1" "May 2011" "SExtractor 2.13.6" "User Commands"
.SH NAME
.SH NAME
sex \- extract a source catalogue from an astronomical FITS image
sex \- extract a source catalogue from an astronomical FITS image
.SH SYNOPSIS
.SH SYNOPSIS
+14 −8
Original line number Original line Diff line number Diff line
@@ -22,7 +22,7 @@
*	You should have received a copy of the GNU General Public License
*	You should have received a copy of the GNU General Public License
*	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
*	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
*
*
*	Last modified:		12/01/2011
*	Last modified:		04/05/2011
*
*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/


@@ -109,7 +109,7 @@ assocstruct *load_assoc(char *filename, wcsstruct *wcs)
  if (!(file = fopen(filename, "r")))
  if (!(file = fopen(filename, "r")))
    return NULL;
    return NULL;


  assoc = NULL;				/* To avoid gcc -Wall warnings */
  QCALLOC(assoc, assocstruct, 1);
  list  = NULL;				/* To avoid gcc -Wall warnings */
  list  = NULL;				/* To avoid gcc -Wall warnings */
  data  = NULL;				/* To avoid gcc -Wall warnings */
  data  = NULL;				/* To avoid gcc -Wall warnings */
  ispoon = ncol = ndata = nlist = size = spoonsize = xindex = yindex
  ispoon = ncol = ndata = nlist = size = spoonsize = xindex = yindex
@@ -170,8 +170,7 @@ assocstruct *load_assoc(char *filename, wcsstruct *wcs)


      nlist = ndata+3;
      nlist = ndata+3;


/*---- Allocate memory for the ASSOC struct and the filtered list */
/*---- Allocate memory for the filtered list */
      QMALLOC(assoc, assocstruct, 1);
      ispoon = ASSOC_BUFINC/(nlist*sizeof(double));
      ispoon = ASSOC_BUFINC/(nlist*sizeof(double));
      spoonsize = ispoon*nlist;
      spoonsize = ispoon*nlist;
      QMALLOC(assoc->list, double, size = spoonsize);
      QMALLOC(assoc->list, double, size = spoonsize);
@@ -210,11 +209,15 @@ assocstruct *load_assoc(char *filename, wcsstruct *wcs)


  fclose(file);
  fclose(file);
  free(data);
  free(data);
  QREALLOC(assoc->list, double, i*nlist);

  assoc->nobj = i;
  assoc->nobj = i;
  if (i>0)
    {
    QREALLOC(assoc->list, double, i*nlist);
    assoc->radius = prefs.assoc_radius;
    assoc->radius = prefs.assoc_radius;
    assoc->ndata = ndata;
    assoc->ndata = ndata;
    assoc->ncol = nlist;
    assoc->ncol = nlist;
    }


  return assoc;
  return assoc;
  }
  }
@@ -236,6 +239,9 @@ void init_assoc(picstruct *field)
    error(EXIT_FAILURE, "*Error*: Assoc-list file not found: ",
    error(EXIT_FAILURE, "*Error*: Assoc-list file not found: ",
	prefs.assoc_name);
	prefs.assoc_name);


  if (assoc->nobj==0)
    warning(prefs.assoc_name, " ASSOC input-list is empty");

/* Sort the assoc-list by y coordinates, and build the hash table */
/* Sort the assoc-list by y coordinates, and build the hash table */
  sort_assoc(field, assoc);
  sort_assoc(field, assoc);


+16 −7
Original line number Original line Diff line number Diff line
@@ -7,7 +7,7 @@
*
*
*	This file part of:	SExtractor
*	This file part of:	SExtractor
*
*
*	Copyright:		(C) 1993-2010 Emmanuel Bertin -- IAP/CNRS/UPMC
*	Copyright:		(C) 1993-2011 Emmanuel Bertin -- IAP/CNRS/UPMC
*
*
*	License:		GNU General Public License
*	License:		GNU General Public License
*
*
@@ -22,7 +22,7 @@
*	You should have received a copy of the GNU General Public License
*	You should have received a copy of the GNU General Public License
*	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
*	along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
*
*
*	Last modified:		11/10/2010
*	Last modified:		23/03/2011
*
*
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/
*%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%*/


@@ -60,7 +60,7 @@ void makeback(picstruct *field, picstruct *wfield, int wscale_flag)
		w,bw, bh, nx,ny,nb,
		w,bw, bh, nx,ny,nb,
		lflag, nr;
		lflag, nr;
   float	*ratio,*ratiop, *weight, *sigma,
   float	*ratio,*ratiop, *weight, *sigma,
		sratio;
		sratio, sigfac;


/* If the weight-map is not an external one, no stats are needed for it */
/* If the weight-map is not an external one, no stats are needed for it */
  if (wfield && wfield->flags&(INTERP_FIELD|BACKRMS_FIELD))
  if (wfield && wfield->flags&(INTERP_FIELD|BACKRMS_FIELD))
@@ -294,7 +294,7 @@ void makeback(picstruct *field, picstruct *wfield, int wscale_flag)
    filterback(wfield);
    filterback(wfield);


/* Compute normalization for variance- or weight-maps*/
/* Compute normalization for variance- or weight-maps*/
  if (wfield && wscale_flag && wfield->flags&(VAR_FIELD|WEIGHT_FIELD))
  if (wfield && wfield->flags&(VAR_FIELD|WEIGHT_FIELD))
    {      
    {      
    nr = 0;
    nr = 0;
    QMALLOC(ratio, float, wfield->nback);
    QMALLOC(ratio, float, wfield->nback);
@@ -308,18 +308,27 @@ void makeback(picstruct *field, picstruct *wfield, int wscale_flag)
        *(ratiop++) = sratio;
        *(ratiop++) = sratio;
        nr++;
        nr++;
        }
        }
    wfield->sigfac = fqmedian(ratio, nr);
    sigfac = fqmedian(ratio, nr);
    for (i=0; i<nr && ratio[i]<=0.0; i++);
    for (i=0; i<nr && ratio[i]<=0.0; i++);
    if (i<nr)
    if (i<nr)
      wfield->sigfac = fqmedian(ratio+i, nr-i);
      sigfac = fqmedian(ratio+i, nr-i);
    else
    else
      {
      {
      warning("Null or negative global weighting factor:","defaulted to 1");
      warning("Null or negative global weighting factor:","defaulted to 1");
      wfield->sigfac = 1.0;
      sigfac = 1.0;
      } 
      } 
    free(ratio);
    free(ratio);

    if (wscale_flag)
      wfield->sigfac = sigfac;
    else
      {
      wfield->sigfac = 1.0;
      field->backsig /= sigfac;
      }
    }
    }



/* Compute 2nd derivatives along the y-direction */
/* Compute 2nd derivatives along the y-direction */
  NFPRINTF(OUTPUT, "Computing background d-map");
  NFPRINTF(OUTPUT, "Computing background d-map");
  free(field->dback);
  free(field->dback);
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