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Commit 7c4a1656 authored by Emmanuel Bertin's avatar Emmanuel Bertin
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Moved the whole package back to GPL. 

Added more complete headers to all files.
Clarified licensing issues.
Updated FITS library.
Updated configuration files.
Added configuration files to the list of data that get installed in ${prefix}/share/sextractor.
Added background offset and point-source model components: FLUX_BACKOFFSET,FLUXERR_BACKOFFSET,FLUX_POINTSOURCE,FLUXERR_POINTSOURCE,MAG_POINTSOURCE,MAGERR_POINTSOURCE.
Tweaked model-fitting convergence parameters.
Fixed catalogue source ordering/number issue in dual-image mode.
Pushed version number to 2.13.0.
parent 08af7335
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AUTHORS
View file @ 7c4a1656
Emmanuel Bertin <bertin@iap.fr> : SExtractor code and FITS library
Emmanuel Bertin <bertin@iap.fr> : SExtractor code
BUGS
View file @ 7c4a1656
V2.5 (2006-07-14)
COOSYS epoch and system are not set to the proper values in ASCII_VOTABLE
catalogs.
Unexpected crashes are experienced when working with extremely large images
(10+Gpixels). This was not the case with earlier versions (ca. 1999).
V2.3 (2002-12-17)
ASSOC options do not work properly with MEF images (this is not really a bug).
Emmanuel Bertin <bertin@iap.fr>
COPYRIGHT
View file @ 7c4a1656
Copyright (c) 1995-2009 Emmanuel Bertin <bertin@iap.fr> IAP-CNRS/Univ,P.&M.Curie
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited
liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
Copyright 1994-2010 IAP-CNRS / Universite P.&M.Curie
Author: Emmanuel Bertin <bertin@iap.fr>
SExtractor is free software: you can redistribute it and/or
modify it under the terms of the GNU General Public License as
published by the Free Software Foundation, either version 3 of the
License, or (at your option) any later version.
SExtractor is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
ChangeLog
View file @ 7c4a1656
This diff is collapsed.
HISTORY
View file @ 7c4a1656
Dec 07: 2.7
October 2010: 2.13
- Adaptive CLASS_STAR
- Model-fitting.
- Licensing back to GPL
December 2009: 2.10
- Support for FLAGS_WEIGHT
December 2007: 2.7
- FITS I/O and astrometry layers updated (same as SWarp and SCAMP)
- Support for model-fitting
- Early support for model-fitting
Jul 06: 2.5
July 2006: 2.5
- Support for VOTable catalogs and metadata in output.
Aug 05: 2.4
August 2005: 2.4
- New windowed measurement parameters
- Better FITS compliancy of output files
May 03: 2.3
May 2003: 2.3
- Autoconf'ed package.
- Dumpable internal config file
- Large File Support
- Support for MEF files
Feb 01: 2.2
- Mostly bug fixes and experimental stuff added
February 2001: 2.2
- Mostly bug fixes and experimental stuff added (PSF-fitting)
May 99: 2.1
May 1999: 2.1
- Mostly bug fixes and experimental stuff added
April 98: 2.0
April 1998: 2.0
- New documentation
January 97 - March 98:1.2
January 1997 - March 1998:1.2
- Rewriting of an important part of the software, in order to
prepare the future... Further optimization of many functions:
V1.2 is 30 to 500% faster than V1.0.
......@@ -47,12 +55,12 @@ January 97 - March 98:1.2
maps, with interpolation.
- Real-time cross-identification with an ASCII catalog.
May 96: 1.1 "DeNIS" version (not distributed officially)
May 1996: 1.1 "DeNIS" version (not distributed officially)
- Corrects 2 fatal bugs which sometimes appeared with DEC-Alphas
- Incorporates a new extended FITS output format.
- Added possibility to measure within multiple apertures.
May 95: Passed 1.0a version: -> FIRST OFFICIAL RELEASE!!! <-
May 1995: Passed 1.0a version: -> FIRST OFFICIAL RELEASE!!! <-
- Now the NNW filename is correct in FITS catalog headers.
- Corrected a convolution bug with large masks at the bottom of
the frame. Added a better-than-nothing normalization of
......@@ -64,7 +72,7 @@ May 95: Passed 1.0a version: -> FIRST OFFICIAL RELEASE!!! <-
right one! Replaced.
- 2 new SExtools released: sexreduce and sexin.
Apr 95: FIRST 1.0 version:
Apr 1995: FIRST 1.0 version:
- Neural-network based star/galaxy classifier implemented. NNW-file
for Moffat-like PSFs in the optical, generated from simulations.
- User's manual updated.
......@@ -75,19 +83,19 @@ Apr 95: FIRST 1.0 version:
- 2 SExTools released: sexcat and sexcopy.
- Alpha VMS version added (thanks to R. Johnstone).
Feb 95: 1.0 beta 5e version:
Feb 1995: 1.0 beta 5e version:
- 2 bugs major corrected: background interpolation when very special
convolution masks are used, and (fixed) aperture magnitude (improved
to sub-pixel integration).
- Possibility to change preference keywords from the command line.
Dec 94: 1.0 beta 5 version:
Dec 1994: 1.0 beta 5 version:
- Major update! Too many changes to mention.
- Code optimized and much more stable now.
- New executables for IBM RS6000 and AMIGA added.
- "II" dropped: call me simply "SExtractor" now.
Sep 94: 1.0 beta 4 version:
Sep 1994: 1.0 beta 4 version:
- "clean" distribution with source and makefiles for DEC Alpha,
HP/UX, and SUN workstations.
- SATUR_LEVEL keyword added.
......@@ -100,18 +108,19 @@ Sep 94: 1.0 beta 4 version:
procedures.
Jun 94: 1.0 beta 3 version: many bugs corrected thanks to enthousiastic
Jun 1994: 1.0 beta 3 version: many bugs corrected thanks to enthousiastic
testers! First public release.
May 94: 1.0 beta 2 version: reads now all kinds of FITS data. C code
May 1994: 1.0 beta 2 version: reads now all kinds of FITS data. C code
completely rewritten in ANSI; image bitmaps are now stored in
floating-point. Now controlled through configuration files.
User's manual written.
Feb 94: 1.0 beta 1 version of "Sextractor II", still limited to 16 bits FITS
Feb 1994: 1.0 beta 1 version of "Sextractor II", still limited to 16 bits FITS
frames, but pipelined processing allows now frames with size up to
65534x65534 to be processable on most machines.
Mar 93: final version of "Sextractor I": limited to 16 bits 2048x2048 max. FITS
Mar 1993: final version of "Sextractor I": limited to 16 bits 2048x2048 max. FITS
frames, specifically oriented toward Schmidt plate data processing.
Has reduced more than 1.2e10 pixels within 10 months...
INSTALL
View file @ 7c4a1656
......@@ -14,17 +14,6 @@ The simplest way to compile this package is:
3. Type `make install' to install the programs and any data files and
documentation.
Optional Features
=================
The executable is dynamically linked by default. If you have the necessary
static libraries installed, you might want to turn on static linking by typing
./configure --enable-static
A statically-linked executable takes more disk and memory space; however it
runs generally faster and it will work on any similar system independently of
the libraries available.
Compilers and Options
=====================
......
Makefile.am
View file @ 7c4a1656
# Main Makefile for SExtractor
# Copyright (C) 2002-2009 Emmanuel Bertin.
#
# Makefile.am
#
# Main Makefile. Process this file with automake to generate a Makefile
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#
# This file part of: SExtractor
#
# Copyright: (C) 2002-2010 IAP/CNRS/UPMC
#
# Author: Emmanuel Bertin (IAP)
#
# License: GNU General Public License
#
# SExtractor is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# SExtractor is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
#
# Last modified: 11/10/2010
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
AUTOMAKE_OPTIONS = foreign no-dependencies
SUBDIRS = man src tests
dist_pkgdata_DATA = xsl/sextractor.xsl
EXTRA_DIST = config doc AUTHORS BUGS ChangeLog COPYRIGHT HISTORY \
INSTALL README THANKS \
dist_pkgdata_DATA = config/* xsl/sextractor.xsl
EXTRA_DIST = doc AUTHORS BUGS ChangeLog COPYRIGHT HISTORY \
INSTALL LICENSE README THANKS \
acx_atlas.m4 acx_prog_cc_optim.m4 \
acx_urbi_resolve_dir.m4
RPM_ROOTDIR = `rpmbuild --nobuild -E %_topdir`
......
Makefile.in
View file @ 7c4a1656
......@@ -14,6 +14,36 @@
@SET_MAKE@
#
# Makefile.am
#
# Main Makefile. Process this file with automake to generate a Makefile
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#
# This file part of: SExtractor
#
# Copyright: (C) 2002-2010 IAP/CNRS/UPMC
#
# Author: Emmanuel Bertin (IAP)
#
# License: GNU General Public License
#
# SExtractor is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# SExtractor is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
#
# Last modified: 11/10/2010
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
VPATH = @srcdir@
pkgdatadir = $(datadir)/@PACKAGE@
pkglibdir = $(libdir)/@PACKAGE@
......@@ -213,14 +243,11 @@ target_alias = @target_alias@
top_build_prefix = @top_build_prefix@
top_builddir = @top_builddir@
top_srcdir = @top_srcdir@
# Main Makefile for SExtractor
# Copyright (C) 2002-2009 Emmanuel Bertin.
AUTOMAKE_OPTIONS = foreign no-dependencies
SUBDIRS = man src tests
dist_pkgdata_DATA = xsl/sextractor.xsl
EXTRA_DIST = config doc AUTHORS BUGS ChangeLog COPYRIGHT HISTORY \
INSTALL README THANKS \
dist_pkgdata_DATA = config/* xsl/sextractor.xsl
EXTRA_DIST = doc AUTHORS BUGS ChangeLog COPYRIGHT HISTORY \
INSTALL LICENSE README THANKS \
acx_atlas.m4 acx_prog_cc_optim.m4 \
acx_urbi_resolve_dir.m4
......
README
View file @ 7c4a1656
SExtractor stands for ``Source Extractor'': a software for making
catalog of sources from astronomical images.
Multi-Extension FITS is now supported. Binary output catalogs are also MEFs.
ASCII output catalogs contain detections from all extensions merged together.
Use the "EXT_NUMBER" catalog parameter to identify the extension on which a
given source was detected. Check-images will also be written as MEFs if the
input image is a MEF.
- The (main) default config file can be dumped by typing "sex -d". Secondary
configuration files like default.param are still needed, though.
The SExtractor homepage is
http://astromatic.net/software/sextractor
The SExtractor homepage is http://astromatic.net/software/sextractor
In case of problems, questions or suggestions related to the software, please
refer to the SExtractor forum:
http://astromatic.net/forum/forumdisplay.php?fid=4
http://astromatic.net/forum
Emmanuel Bertin.
Emmanuel Bertin <bertin@iap.fr>.
THANKS
View file @ 7c4a1656
Stephane Arnouts <Stephane.Arnouts@oamp.fr>
Stéphane Arnouts <Stephane.Arnouts@oamp.fr>
Suggestions and extensive testing
Marta Arroyo <marta.arroyo@alumnos.unican.es>
For her preparatory work on galaxy model-fitting
Pierre Astier <pierre.astier@in2p3.fr>
Suggestions and bug fixes
Eric Aubourg <Eric.Aubourg@cea.fr>
Hints about how to optimize a C code
Anthony Baillard <baillard@iap.fr>
Testing of model-fitting
Gary Bernstein <garyb@physics.upenn.edu>
Helping with error estimates
Mark Calabretta <mcalabre@atnf.csiro.au>
SExtractor makes use of his nice WCS library
Pascal Fouque <pfouque@eso.org>
SExtractor uses an early version of his great WCS library
Philippe Delorme <pdelorme@obs.ujf-grenoble.fr>
Debugging and improving PSF-fitting
Akim Demaille <akim@lrde.epita.fr>
for solving the $datarootdir issue and providing the URBI_RESOLVE_DIR()
function.
Shantanu Desai <shantanu@astro.illinois.edu>
Finding well-hidden bugs.
Pascal Fouqué <pfouque@eso.org>
Suggestions and testing
Raphaël Gavazzi <gavazzi@iap.fr>
Checking shape measurements
Delphine Hardin <hardin@in2p3.fr>
Suggestions and bug fixes
Benne Holwerda <holwerda@stsci.edu>
For making his cookbook available
Jean-Paul Kneib <kneib@omp.fr>, Ian Smail <Ian.Smail@durham.ac.uk>
Suggestions and spreading the software back in the early days!
Jan Kohnert <jan.kohnert@nexgo.de>
Helping SExtractor users
Ville Laurikari <vl@iki.fi>
For his VL_PROG_CC_WARNINGS (modified to ACX_PROG_CC_OPTIM)
Valerie de Lapparent <lapparen@iap.fr>
Valérie de Lapparent <lapparen@iap.fr>
Suggestions and testing of model-fitting
Manolis Lourakis <lourakis@ics.forth.gr>
For his implementation of the Levenberg-Marquardt algorithm
Chiara Marmo <marmo@iap.fr>
For providing the VOTable to HTML XSLT filter and testing.
Joe Mohr <jmohr@illinois.edu>
Suggestions and testing
Gerard Tissier <tissier@iap.fr>
Sergio Pascual <sergiopr@astrax.fis.ucm.es>
Helping with autoconfig and packaging
Nacho Sevilla <nsevilla@gmail.com>
Testing star/galaxy classification
Víctor Terrón <vterron@iaa.es>
Suggesting and documenting DETECT_MAXAREA
Patrick Tisserand <tisseran@mso.anu.edu.au>
Testing PSF-fitting
Gérard Tissier <tissier@iap.fr>
Preliminary implementation of the VOTable output
Joachim Wuttke <J.Wuttke@fz-juelich.de>
For his implementation of the Levenberg-Marquardt algorithm
Institut d'Astrophysique de Paris
University of Leiden
DeNIS project
European Southern Observatory
Sterrewacht Leiden
TERAPIX project
French Ministry of Research Grant 04-5500 (“ACI masse de donn´ees”)
University of Illinois
Dark Energy Survey data management project
Financial and technical support
Too many people to list
......
acx_atlas.m4
View file @ 7c4a1656
dnl @synopsis ACX_ATLAS([ATLAS_LIBDIR, ATLAS_INCDIR, ATLAS_PFLAG, [ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]])
dnl This macro figures out if the ATLAS library and header files
dnl are installed.
dnl
dnl acx_atlas.m4
dnl
dnl Figure out if the ATLAS library and header files are installed.
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl This file part of: AstrOmatic software
dnl
dnl Copyright: (C) 2003-2010 IAP/CNRS/UPMC
dnl
dnl Author: Emmanuel Bertin (IAP)
dnl
dnl License: GNU General Public License
dnl
dnl AstrOmatic software is free software: you can redistribute it and/or
dnl modify it under the terms of the GNU General Public License as
dnl published by the Free Software Foundation, either version 3 of the
dnl License, or (at your option) any later version.
dnl AstrOmatic software is distributed in the hope that it will be useful,
dnl but WITHOUT ANY WARRANTY; without even the implied warranty of
dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
dnl GNU General Public License for more details.
dnl You should have received a copy of the GNU General Public License
dnl along with AstrOmatic software.
dnl If not, see <http://www.gnu.org/licenses/>.
dnl
dnl Last modified: 10/10/2010
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl @synopsis ACX_ATLAS([ATLAS_LIBDIR, ATLAS_INCDIR, ATLAS_PFLAG,
dnl [ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]])
dnl You may wish to use these variables in your default LIBS:
dnl
dnl LIBS="$ATLAS_LIBS $LIBS"
......@@ -8,9 +38,6 @@ dnl
dnl ACTION-IF-FOUND is a list of shell commands to run if BLAS/LAPACK
dnl is found (HAVE_ATLAS is defined first), and ACTION-IF-NOT-FOUND
dnl is a list of commands to run it if it is not found.
dnl
dnl @version $Id: acx_atlas.m4,v 1.0 2009/06/26 14:30:17 bertin Exp $
dnl @author Emmanuel Bertin <bertin@iap.fr>
AC_DEFUN([ACX_ATLAS], [
AC_REQUIRE([AC_CANONICAL_HOST])
......
acx_fftw.m4
View file @ 7c4a1656
dnl @synopsis ACX_FFTW([FFTW_DIR, FFTW_INCDIR, FFTW_PFLAG, FFTW_FFLAG, [ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]])
dnl
dnl acx_fftw.m4
dnl
dnl Figure out if the FFTW3 library and header files are installed.
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl This file part of: AstrOmatic software
dnl
dnl Copyright: (C) 2003-2010 IAP/CNRS/UPMC
dnl
dnl Author: Emmanuel Bertin (IAP)
dnl
dnl License: GNU General Public License
dnl
dnl AstrOmatic software is free software: you can redistribute it and/or
dnl modify it under the terms of the GNU General Public License as
dnl published by the Free Software Foundation, either version 3 of the
dnl License, or (at your option) any later version.
dnl AstrOmatic software is distributed in the hope that it will be useful,
dnl but WITHOUT ANY WARRANTY; without even the implied warranty of
dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
dnl GNU General Public License for more details.
dnl You should have received a copy of the GNU General Public License
dnl along with AstrOmatic software.
dnl If not, see <http://www.gnu.org/licenses/>.
dnl
dnl Last modified: 10/10/2010
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl @synopsis ACX_FFTW([FFTW_DIR, FFTW_INCDIR, FFTW_PFLAG, FFTW_FFLAG,
dnl [ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]])
dnl This macro figures out if the FFTW3 libraries and header
dnl files are installed.
dnl You may wish to use these variables in your default LIBS and CFLAGS:
......@@ -8,9 +40,6 @@ dnl
dnl ACTION-IF-FOUND is a list of shell commands to run if FFTW
dnl is found (HAVE_FFTWx are defined first), and ACTION-IF-NOT-FOUND
dnl is a list of commands to run it if it is not found.
dnl
dnl @version $Id: acx_fftw.m4,v 1.0 2009/06/26 21:30:17 bertin Exp $
dnl @author Emmanuel Bertin <bertin@iap.fr>
AC_DEFUN([ACX_FFTW], [
AC_REQUIRE([AC_CANONICAL_HOST])
......
acx_prog_cc_optim.m4
View file @ 7c4a1656
dnl @synopsis ACX_PROG_CC_OPTIM
dnl
dnl Enables a reasonable set of optimization flags for the C compiler.
dnl acx_prog_cc_optim.m4
dnl
dnl Enable a reasonable set of optimization flags for the C compiler.
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl This file part of: AstrOmatic software
dnl
dnl Copyright: (C) 2002-2010 IAP/CNRS/UPMC (this version)
dnl (C) 2002 Ville Lauriki (original version)
dnl
dnl Authors: Emmanuel Bertin (IAP)
dnl Ville Lauriki (original VL_PROG_CC_WARNINGS)
dnl
dnl Licenses: GPL (this version)
dnl MIT AllPermissive (original script)
dnl
dnl AstrOmatic software is free software: you can redistribute it and/or
dnl modify it under the terms of the GNU General Public License as
dnl published by the Free Software Foundation, either version 3 of the
dnl License, or (at your option) any later version.
dnl AstrOmatic software is distributed in the hope that it will be useful,
dnl but WITHOUT ANY WARRANTY; without even the implied warranty of
dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
dnl GNU General Public License for more details.
dnl You should have received a copy of the GNU General Public License
dnl along with AstrOmatic software.
dnl If not, see <http://www.gnu.org/licenses/>.
dnl
dnl Last modified: 09/10/2010
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl @synopsis ACX_PROG_CC_OPTIM
dnl
dnl Currently this macro knows about GCC, Solaris C compiler,
dnl Digital Unix C compiler, C for AIX Compiler, HP-UX C compiler,
......@@ -8,9 +40,8 @@ dnl IRIX C compiler, NEC SX-5 (Super-UX 10) C compiler, and Cray J90
dnl (Unicos 10.0.0.8) C compiler.
dnl
dnl This macro is a modification of Ville Laurikari's VL_PROG_CC_WARNINGS
dnl @version 1.4 (2009-09-08)
dnl @authors Emmanuel Bertin <bertin@iap.fr> Ville Laurikari <vl@iki.fi>
dnl
AC_DEFUN([ACX_PROG_CC_OPTIM], [
msg="for C compiler optimization flags"
AC_CACHE_CHECK($msg, prog_cc_optim_cv_flags, [
......
acx_urbi_resolve_dir.m4
View file @ 7c4a1656
dnl
dnl acx_urbi_resolve_dir.m4
dnl
dnl Enable a reasonable set of optimization flags for the C compiler.
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl This file part of: AstrOmatic software
dnl
dnl Copyright: (C) 2007-2010 IAP/CNRS/UPMC (this version)
dnl (C) 2007 Akim Demaille (original version)
dnl
dnl Authors: Emmanuel Bertin (IAP)
dnl Akim Demaille (original script)
dnl
dnl License: GPL
dnl
dnl AstrOmatic software is free software: you can redistribute it and/or
dnl modify it under the terms of the GNU General Public License as
dnl published by the Free Software Foundation, either version 3 of the
dnl License, or (at your option) any later version.
dnl AstrOmatic software is distributed in the hope that it will be useful,
dnl but WITHOUT ANY WARRANTY; without even the implied warranty of
dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
dnl GNU General Public License for more details.
dnl You should have received a copy of the GNU General Public License
dnl along with AstrOmatic software.
dnl If not, see <http://www.gnu.org/licenses/>.
dnl
dnl Last modified: 09/10/2010
dnl
dnl %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
dnl
dnl @synopsis ACX_URBI_RESOLVE_DIR
dnl
dnl Return a directory with all inner variables expanded.
dnl Based on a macro kindly provided by Akim Demaille <akim@lrde.epita.fr>.
# URBI_RESOLVE_DIR_PREPARE
# ------------------------
......@@ -6,7 +42,7 @@
m4_defun([URBI_RESOLVE_DIR_PREPARE],
[# PATH urbi_resolve_dir(DIR)
# --------------------------
# Return the DIR with all inner variables expanded.
#
urbi_resolve_dir ()
{
ac_$0_dir=$[]1
......
config/default.param
View file @ 7c4a1656
This diff is collapsed.
config/default.sex
View file @ 7c4a1656
# Default configuration file for SExtractor 2.5.0
# EB 2006-07-14
# Default configuration file for SExtractor 2.12.4
# EB 2010-10-10
#
#-------------------------------- Catalog ------------------------------------
......@@ -12,7 +12,8 @@ PARAMETERS_NAME default.param # name of the file containing catalog contents
#------------------------------- Extraction ----------------------------------
DETECT_TYPE CCD # CCD (linear) or PHOTO (with gamma correction)
DETECT_MINAREA 5 # minimum number of pixels above threshold
DETECT_MINAREA 3 # min. # of pixels above threshold
DETECT_THRESH 1.5 # <sigmas> or <threshold>,<ZP> in mag.arcsec-2
ANALYSIS_THRESH 1.5 # <sigmas> or <threshold>,<ZP> in mag.arcsec-2
......@@ -25,21 +26,34 @@ DEBLEND_MINCONT 0.005 # Minimum contrast parameter for deblending
CLEAN Y # Clean spurious detections? (Y or N)?
CLEAN_PARAM 1.0 # Cleaning efficiency
MASK_TYPE CORRECT # type of detection MASKing: can be one of
# NONE, BLANK or CORRECT
#-------------------------------- WEIGHTing ----------------------------------
WEIGHT_TYPE NONE # type of WEIGHTing: NONE, BACKGROUND,
# MAP_RMS, MAP_VAR or MAP_WEIGHT
WEIGHT_IMAGE weight.fits # weight-map filename
#-------------------------------- FLAGging -----------------------------------
FLAG_IMAGE flag.fits # filename for an input FLAG-image
FLAG_TYPE OR # flag pixel combination: OR, AND, MIN, MAX
# or MOST
#------------------------------ Photometry -----------------------------------
PHOT_APERTURES 5 # MAG_APER aperture diameter(s) in pixels
PHOT_AUTOPARAMS 2.5, 3.5 # MAG_AUTO parameters: <Kron_fact>,<min_radius>
PHOT_PETROPARAMS 2.0, 3.5 # MAG_PETRO parameters: <Petrosian_fact>,
# <min_radius>
PHOT_AUTOAPERS 0.0,0.0 # <estimation>,<measurement> minimum apertures
# for MAG_AUTO and MAG_PETRO
SATUR_LEVEL 50000.0 # level (in ADUs) at which arises saturation
SATUR_KEY SATURATE # keyword for saturation level (in ADUs)
MAG_ZEROPOINT 0.0 # magnitude zero-point
MAG_GAMMA 4.0 # gamma of emulsion (for photographic scans)
GAIN 0.0 # detector gain in e-/ADU
GAIN_KEY GAIN # keyword for detector gain in e-/ADU
PIXEL_SCALE 1.0 # size of pixel in arcsec (0=use FITS WCS info)
#------------------------- Star/Galaxy Separation ----------------------------
......@@ -49,11 +63,11 @@ STARNNW_NAME default.nnw # Neural-Network_Weight table filename
#------------------------------ Background -----------------------------------
BACK_TYPE AUTO # AUTO or MANUAL
BACK_VALUE 0.0 # Default background value in MANUAL mode
BACK_SIZE 64 # Background mesh: <size> or <width>,<height>
BACK_FILTERSIZE 3 # Background filter: <size> or <width>,<height>
BACKPHOTO_TYPE GLOBAL # can be GLOBAL or LOCAL
#------------------------------ Check Image ----------------------------------
CHECKIMAGE_TYPE NONE # can be NONE, BACKGROUND, BACKGROUND_RMS,
......@@ -68,8 +82,22 @@ MEMORY_OBJSTACK 3000 # number of objects in stack
MEMORY_PIXSTACK 300000 # number of pixels in stack
MEMORY_BUFSIZE 1024 # number of lines in buffer
#------------------------------- ASSOCiation ---------------------------------
ASSOC_NAME sky.list # name of the ASCII file to ASSOCiate
ASSOC_DATA 2,3,4 # columns of the data to replicate (0=all)
ASSOC_PARAMS 2,3,4 # columns of xpos,ypos[,mag]
ASSOC_RADIUS 2.0 # cross-matching radius (pixels)
ASSOC_TYPE NEAREST # ASSOCiation method: FIRST, NEAREST, MEAN,
# MAG_MEAN, SUM, MAG_SUM, MIN or MAX
ASSOCSELEC_TYPE MATCHED # ASSOC selection type: ALL, MATCHED or -MATCHED
#----------------------------- Miscellaneous ---------------------------------
VERBOSE_TYPE NORMAL # can be QUIET, NORMAL or FULL
HEADER_SUFFIX .head # Filename extension for additional headers
WRITE_XML N # Write XML file (Y/N)?
XML_NAME sex.xml # Filename for XML output
XSL_URL file:///usr/local/share/sextractor/sextractor.xsl
# Filename for XSL style-sheet
configure
View file @ 7c4a1656
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.63 for sextractor 2.12.3.
# Generated by GNU Autoconf 2.63 for sextractor 2.13.0.
#
# Report bugs to <bertin@iap.fr>.
#
......@@ -750,8 +750,8 @@ SHELL=${CONFIG_SHELL-/bin/sh}
# Identity of this package.
PACKAGE_NAME='sextractor'
PACKAGE_TARNAME='sextractor'
PACKAGE_VERSION='2.12.3'
PACKAGE_STRING='sextractor 2.12.3'
PACKAGE_VERSION='2.13.0'
PACKAGE_STRING='sextractor 2.13.0'
PACKAGE_BUGREPORT='bertin@iap.fr'
 
ac_unique_file="src/makeit.c"
......@@ -1508,7 +1508,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
\`configure' configures sextractor 2.12.3 to adapt to many kinds of systems.
\`configure' configures sextractor 2.13.0 to adapt to many kinds of systems.
 
Usage: $0 [OPTION]... [VAR=VALUE]...
 
......@@ -1578,7 +1578,7 @@ fi
 
if test -n "$ac_init_help"; then
case $ac_init_help in
short | recursive ) echo "Configuration of sextractor 2.12.3:";;
short | recursive ) echo "Configuration of sextractor 2.13.0:";;
esac
cat <<\_ACEOF
 
......@@ -1711,7 +1711,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
sextractor configure 2.12.3
sextractor configure 2.13.0
generated by GNU Autoconf 2.63
 
Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
......@@ -1725,7 +1725,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
 
It was created by sextractor $as_me 2.12.3, which was
It was created by sextractor $as_me 2.13.0, which was
generated by GNU Autoconf 2.63. Invocation command line was
 
$ $0 $@
......@@ -2428,7 +2428,7 @@ fi
 
# Define the identity of the package.
PACKAGE='sextractor'
VERSION='2.12.3'
VERSION='2.13.0'
 
 
cat >>confdefs.h <<_ACEOF
......@@ -23273,7 +23273,7 @@ fi
# Set the data directory to a true absolute path
datadir2=$(# PATH urbi_resolve_dir(DIR)
# --------------------------
# Return the DIR with all inner variables expanded.
#
urbi_resolve_dir ()
{
ac_URBI_RESOLVE_DIR_PREPARE_dir=$1
......@@ -28593,7 +28593,7 @@ exec 6>&1
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
This file was extended by sextractor $as_me 2.12.3, which was
This file was extended by sextractor $as_me 2.13.0, which was
generated by GNU Autoconf 2.63. Invocation command line was
 
CONFIG_FILES = $CONFIG_FILES
......@@ -28656,7 +28656,7 @@ Report bugs to <bug-autoconf@gnu.org>."
_ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_version="\\
sextractor config.status 2.12.3
sextractor config.status 2.13.0
configured by $0, generated by GNU Autoconf 2.63,
with options \\"`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`\\"
 
......
configure.ac
View file @ 7c4a1656
# configure.in for SExtractor
# (C) E.Bertin 2002-2010
# Process this file with autoconf to produce a configure script.
#
# configure.ac
#
# Process this file with autoconf to generate a configure script.
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#
# This file part of: SExtractor
#
# Copyright: (C) 2002-2010 IAP/CNRS/UPMC
#
# Author: Emmanuel Bertin (IAP)
#
# SExtractor is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# SExtractor is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with SExtractor. If not, see <http://www.gnu.org/licenses/>.
#
# Last modified: 11/10/2010
#
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# First, disable the annoying config.cache
define([AC_CACHE_LOAD],)
define([AC_CACHE_SAVE],)
# This is your standard Bertin source code...
AC_INIT(sextractor, 2.12.3, [bertin@iap.fr])
AC_INIT(sextractor, 2.13.0, [bertin@iap.fr])
AC_CONFIG_SRCDIR(src/makeit.c)
AC_CONFIG_AUX_DIR(autoconf)
AM_CONFIG_HEADER(config.h)
......
doc/README.DOC
View file @ 7c4a1656
The present documentation of SExtractor2 is still very incomplete: this
The present documentation of SExtractor is still very incomplete: this
is rather a ``proto-documentation''. Chapters are missing. The english
is so-so. At least I tried to remove any obsolete information from V1.0.
I will progressively upgrade the documentation during the coming months.
In the meanwhile, you may still retrieve some basic information from the
old documentation included in V1.0 archive:
ftp://ftp/pub/from_users/bertin/sextractor/sex_1.0a.tar.gz
The SExtractor handbook from Benne Holwerda is also included for convenience.
is so-so. We will progressively upgrade the documentation during 2011.
Emmanuel Bertin.
man/sex.1
View file @ 7c4a1656
.TH SEXTRACTOR "1" "September 2010" "SWarp 2.12.3" "User Commands"
.TH SEXTRACTOR "1" "October 2010" "SExtractor 2.13.0" "User Commands"
.SH NAME
sex \- extract a source catalog from an astronomical FITS image
sex \- extract a source catalogue from an astronomical FITS image
.SH SYNOPSIS
.B sex \fIimage\fR [\fI-c configuration-file\fR]
.RS
......@@ -29,19 +29,26 @@ print version number, then exit
.TP
\fB\-d\fR, \fB\-\-dump\fR
dump a default configuration file
.SH AUTHOR
Written by Emmanuel Bertin (Institut d'Astrophysique de Paris and Observatoire de Paris).
.PP
Copyright 1994-2005 Emmanuel Bertin
.RE
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
.SH "REPORTING BUGS"
Report bugs to <sextractor@iap.fr>.
.SH "SEE ALSO"
.BR swarp (1)
.PP
.SH MANUAL
The full documentation for
.B SExtractor
is maintained as a PDF manual available at
.B http://astromatic.net/software/sextractor
.SH "REPORTING BUGS"
Please report bugs to the SExtractor software forum at
http://astromatic.net/forum.
.SH "SEE ALSO"
.BR
eye(1), missfits(1), psfex(1), scamp(1), sky(1), stiff(1), stuff(1), swarp (1),
ww(1)
.SH AUTHORS
Written by Emmanuel Bertin (Institut d'Astrophysique de Paris)
.PP
.SH LICENSE
SExtractor is licensed under the terms of the General Public License (GPL),
version 3.
.SH COPYRIGHT
.PP
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
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