ImageHeader.py 19.7 KB
Newer Older
Fang Yuedong's avatar
Fang Yuedong committed
1
2
3
4
5
6
7
8
9
"""
generate image header
"""
import numpy as np

from astropy.io import fits
import astropy.wcs as pywcs
from collections import OrderedDict

Fang Yuedong's avatar
Fang Yuedong committed
10
# from scipy import math
Fang Yuedong's avatar
Fang Yuedong committed
11
12
13
14
import random

import os
import sys
Xin Zhang's avatar
Xin Zhang committed
15
import astropy.coordinates as coord
Fang Yuedong's avatar
Fang Yuedong committed
16
17
from astropy.coordinates import SkyCoord
from astropy.wcs.utils import fit_wcs_from_points
Xin Zhang's avatar
Xin Zhang committed
18
from astropy.time import Time
Fang Yuedong's avatar
Fang Yuedong committed
19
from astropy import wcs
Fang Yuedong's avatar
Fang Yuedong committed
20

21
22
23
24
from datetime import datetime
# import socket
import platform

Fang Yuedong's avatar
Fang Yuedong committed
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
def chara2digit(char):
    """ Function to judge and convert characters to digitals

    Parameters
    ----------

    """

    try:
        float(char) # for int, long and float
    except ValueError:
        pass
        return char
    else:
        data = float(char)
        return data


def read_header_parameter(filename='global_header.param'):
    """ Function to read the header parameters

    Parameters
    ----------

    """

    name = []
    value = []
    description = []
    for line in open(filename):
        line = line.strip("\n")
        arr = line.split('|')
#        csvReader = csv.reader(csvDataFile)
#        for arr in csvReader:
        name.append(arr[0])
        # print(arr[0],arr[1])
        value.append(chara2digit(arr[1]))
        description.append(arr[2])

#    print(value)
    return name, value, description

def rotate_CD_matrix(cd, pa_aper):
    """Rotate CD matrix
    
    Parameters
    ----------
    cd: (2,2) array
        CD matrix
    
    pa_aper: float
        Position angle, in degrees E from N, of y axis of the detector
    
    Returns
    -------
    cd_rot: (2,2) array
        Rotated CD matrix
    
    Comments
    --------
    `astropy.wcs.WCS.rotateCD` doesn't work for non-square pixels in that it
    doesn't preserve the pixel scale!  The bug seems to come from the fact
    that `rotateCD` assumes a transposed version of its own CD matrix.
    
    """
    rad = np.deg2rad(-pa_aper)
    mat = np.zeros((2,2))
    mat[0,:] = np.array([np.cos(rad),-np.sin(rad)])
    mat[1,:] = np.array([np.sin(rad),np.cos(rad)])
    cd_rot = np.dot(mat, cd)
    return cd_rot

97
98
99
100
101
102
103
104
105
106
107
def calcaluteSLSRotSkyCoor(pix_xy = None,rot_angle = 1, xlen = 9216, ylen = 9232, w = None):
    rad = np.deg2rad(rot_angle)
    mat = np.zeros((2,2))
    mat[0,:] = np.array([np.cos(rad),-np.sin(rad)])
    mat[1,:] = np.array([np.sin(rad),np.cos(rad)])
    center = np.array([xlen/2, ylen/2])
    rot_pix = np.dot(mat, pix_xy-center) + center
    skyCoor = w.wcs_pix2world(np.array([rot_pix]), 1)

    return skyCoor

Fang Yuedong's avatar
Fang Yuedong committed
108

Xin Zhang's avatar
Xin Zhang committed
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
# def Header_extention(xlen = 9216, ylen = 9232, gain = 1.0, readout = 5.0, dark = 0.02,saturation=90000, row_num = 1, col_num = 1):
#
#     """ Creat an image frame for CCST with multiple extensions
#
#     Parameters
#     ----------
#
#     """
#
#     flag_ltm_x = [0,1,-1,1,-1]
#     flag_ltm_y = [0,1,1,-1,-1]
#     flag_ltv_x = [0,0,1,0,1]
#     flag_ltv_y = [0,0,0,1,1]
#
#     detector_size_x = int(xlen)
#     detector_size_y = int(ylen)
#
#     data_x = str(int(detector_size_x))
#     data_y = str(int(detector_size_y))
#
#     data_sec = '[1:'+data_x+',1:'+data_y+']'
#     e_header_fn = os.path.split(os.path.realpath(__file__))[0] + '/extension_header.param'
#     name, value, description = read_header_parameter(e_header_fn)
#     f = open(os.path.split(os.path.realpath(__file__))[0] + '/filter.lst')
#     s = f.readline()
#     s = s.strip("\n")
#     filters = s.split(' ')
#     s = f.readline()
#     s = s.strip("\n")
#     filterID = s.split()
#
#     s = f.readline()
#     s = s.strip("\n")
#     CCDID = s.split()
#
#     k = (row_num-1)*6+col_num
#
#     h_iter = 0
#     for n1,v1,d1 in zip(name, value, description):
#         if n1=='EXTNAME':
#             value[h_iter] = 'RAW,'+CCDID[k-1].rjust(2,'0')
#         if n1=='CCDNAME':
#             value[h_iter] = 'ccd' + CCDID[k-1].rjust(2,'0')
#         if n1=='AMPNAME':
#             value[h_iter] = 'ccd' + CCDID[k-1].rjust(2,'0') + ':A'
#         if n1=='GAIN':
#             value[h_iter] = gain
#         if n1=='RDNOISE':
#             value[h_iter] = readout
#         if n1=='SATURATE':
#             value[h_iter] = saturation
#         if n1=='CCDCHIP':
#             value[h_iter] = 'ccd' + CCDID[k-1].rjust(2,'0')
#         if n1=='CCDLABEL':
#             value[h_iter] = filters[k-1] + '-' + filterID[k-1]
#         if n1=='DATASEC':
#             value[h_iter] = data_sec
#
#         h_iter = h_iter + 1
#
#
#     return name, value, description
Fang Yuedong's avatar
Fang Yuedong committed
171
172
173


##9232 9216  898 534 1309 60 -40  -23.4333
Fang Yuedong's avatar
Fang Yuedong committed
174
175
def WCS_def(xlen = 9216, ylen = 9232, gapy = 898.0, gapx1 = 534, gapx2 = 1309, ra_ref = 60, dec_ref = -40, pa = -23.433, pixel_scale = 0.074, pixel_size=1e-2, 
    rotate_chip=0., filter = 'GI', row_num = None, col_num = None, xcen = None, ycen = None):
Fang Yuedong's avatar
Fang Yuedong committed
176
177
178
179
180
181
182

    """ Creat a wcs frame for CCST with multiple extensions

    Parameters
    ----------

    """
Fang Yuedong's avatar
Fang Yuedong committed
183
184
185
186
187
188
189
190
    r_dat = OrderedDict()
    r_dat['EQUINOX'] = 2000.0
    r_dat['WCSDIM'] = 2.0
    r_dat['CTYPE1'] = 'RA---TAN'
    r_dat['CTYPE2'] = 'DEC--TAN'
    r_dat['CRVAL1'] = ra_ref
    r_dat['CRVAL2'] = dec_ref
    
Fang Yuedong's avatar
Fang Yuedong committed
191
192
193
194
195
196
    flag_x = [0, 1, -1, 1, -1]
    flag_y = [0, 1, 1, -1, -1]
    flag_ext_x = [0,-1,1,-1,1]
    flag_ext_y = [0,-1,-1,1,1]
    pa_aper = pa

Fang Yuedong's avatar
Fang Yuedong committed
197
    if (row_num is not None) and (col_num is not None):
Fang Yuedong's avatar
Fang Yuedong committed
198

Fang Yuedong's avatar
Fang Yuedong committed
199
200
201
        x_num = 6
        y_num = 5
        detector_num = x_num*y_num
Fang Yuedong's avatar
Fang Yuedong committed
202

Fang Yuedong's avatar
Fang Yuedong committed
203
204
205
206
        detector_size_x = xlen
        detector_size_y = ylen
        gap_y = gapy
        gap_x = [gapx1,gapx2]
Fang Yuedong's avatar
Fang Yuedong committed
207

Fang Yuedong's avatar
Fang Yuedong committed
208
209
        gap_x1_num = 3
        gap_x2_num = 2
Fang Yuedong's avatar
Fang Yuedong committed
210

Fang Yuedong's avatar
Fang Yuedong committed
211
        y_center = (detector_size_y*y_num+gap_y*(y_num-1))/2
Fang Yuedong's avatar
Fang Yuedong committed
212

Fang Yuedong's avatar
Fang Yuedong committed
213
        x_center = (detector_size_x*x_num+gap_x[0]*gap_x1_num+gap_x[1]*gap_x2_num)/2
Fang Yuedong's avatar
Fang Yuedong committed
214

Fang Yuedong's avatar
Fang Yuedong committed
215
216
217
218
219
        gap_x_map = np.array([[0,0,0,0,0],[gap_x[0],gap_x[1],gap_x[1],gap_x[1],gap_x[1]],[gap_x[1],gap_x[0],gap_x[0],gap_x[0],gap_x[0]],[gap_x[0],gap_x[0],gap_x[0],gap_x[0],gap_x[0]],[gap_x[0],gap_x[0],gap_x[0],gap_x[0],gap_x[1]],[gap_x[1],gap_x[1],gap_x[1],gap_x[1],gap_x[0]]])
        
        j = row_num
        i = col_num
        # ccdnum = str((j-1)*5+i)
Fang Yuedong's avatar
Fang Yuedong committed
220

Fang Yuedong's avatar
Fang Yuedong committed
221
        x_ref, y_ref = detector_size_x*i + sum(gap_x_map[0:i,j-1]) - detector_size_x/2. , (detector_size_y+gap_y)*j-gap_y-detector_size_y/2
Fang Yuedong's avatar
Fang Yuedong committed
222
        
Fang Yuedong's avatar
Fang Yuedong committed
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
        for k in range(1,2):
            
            cd = np.array([[ pixel_scale,  0], [0, pixel_scale]])/3600.*flag_x[k]
            cd_rot = rotate_CD_matrix(cd, pa_aper)

            # f = open("CCD"+ccdnum.rjust(2,'0')+"_extension"+str(k)+"_wcs.param","w")
            r_dat['CRPIX1'] = flag_ext_x[k]*((x_ref+flag_ext_x[k]*detector_size_x/2)-x_center)
            r_dat['CRPIX2'] = flag_ext_y[k]*((y_ref+flag_ext_y[k]*detector_size_y/2)-y_center)
            r_dat['CD1_1'] = cd_rot[0,0]
            r_dat['CD1_2'] = cd_rot[0,1]
            r_dat['CD2_1'] = cd_rot[1,0]
            r_dat['CD2_2'] = cd_rot[1,1]

            if filter in ['GU', 'GV', 'GI']:

                w = wcs.WCS(naxis=2)
                w.wcs.crpix = [r_dat['CRPIX1'], r_dat['CRPIX2']]
                w.wcs.cd = cd_rot
                w.wcs.crval = [ra_ref, dec_ref]
                w.wcs.ctype = [r_dat['CTYPE1'], r_dat['CTYPE2']]

                # test_center_o = w.wcs_pix2world(np.array([[xlen / 2, ylen / 2]]), 1)

246
                sls_rot = rotate_chip
Fang Yuedong's avatar
Fang Yuedong committed
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
                if i > 2:
                    sls_rot = -sls_rot

                sn_x = 30
                sn_y = 30
                x_pixs = np.zeros(sn_y * sn_x)
                y_pixs = np.zeros(sn_y * sn_x)
                xpixs_line = np.linspace(1, xlen, sn_x)
                ypixs_line = np.linspace(1, ylen, sn_y)

                sky_coors = []

                for n1, y in enumerate(ypixs_line):
                    for n2, x in enumerate(xpixs_line):
                        i_pix = n1 * sn_x + n2
                        x_pixs[i_pix] = x
                        y_pixs[i_pix] = y

                        pix_coor = np.array([x, y])
                        sc1 = calcaluteSLSRotSkyCoor(pix_xy=pix_coor, rot_angle=sls_rot, xlen=xlen, ylen=ylen, w=w)
                        # print(sc1[0,0],sc1[0,1])
                        sky_coors.append((sc1[0, 0], sc1[0, 1]))

                wcs_new = fit_wcs_from_points(xy=np.array([x_pixs, y_pixs]),
                                            world_coords=SkyCoord(sky_coors, frame="icrs", unit="deg"), projection='TAN')

                # print(wcs_new)
                # test_center = wcs_new.wcs_pix2world(np.array([[xlen / 2, ylen / 2]]), 1)
                #
                # print(test_center - test_center_o)

                r_dat['CD1_1'] = wcs_new.wcs.cd[0, 0]
                r_dat['CD1_2'] = wcs_new.wcs.cd[0, 1]
                r_dat['CD2_1'] = wcs_new.wcs.cd[1, 0]
                r_dat['CD2_2'] = wcs_new.wcs.cd[1, 1]
                r_dat['CRPIX1'] = wcs_new.wcs.crpix[0]
                r_dat['CRPIX2'] = wcs_new.wcs.crpix[1]

                r_dat['CRVAL1'] = wcs_new.wcs.crval[0]
                r_dat['CRVAL2'] = wcs_new.wcs.crval[1]

    elif (xcen is not None) and (ycen is not None):
        xcen, ycen = xcen/pixel_size, ycen/pixel_size
        x1, y1 = xcen - xlen/2., ycen - ylen/2.
        r_dat['CRPIX1'] = -x1
        r_dat['CRPIX2'] = -y1

294
295
        # cd = np.array([[ pixel_scale,  0], [0, pixel_scale]])/3600.*flag_x[1]
        cd = np.array([[ pixel_scale,  0], [0, -pixel_scale]])/3600.
Fang Yuedong's avatar
Fang Yuedong committed
296
297
298
299
300
        cd_rot = rotate_CD_matrix(cd, pa_aper)
        r_dat['CD1_1'] = cd_rot[0,0]
        r_dat['CD1_2'] = cd_rot[0,1]
        r_dat['CD2_1'] = cd_rot[1,0]
        r_dat['CD2_2'] = cd_rot[1,1]
301

Fang Yuedong's avatar
Fang Yuedong committed
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
        w = wcs.WCS(naxis=2)
        w.wcs.crpix = [r_dat['CRPIX1'], r_dat['CRPIX2']]
        w.wcs.cd = cd_rot
        w.wcs.crval = [ra_ref, dec_ref]
        w.wcs.ctype = [r_dat['CTYPE1'], r_dat['CTYPE2']]

        sn_x = 30
        sn_y = 30
        x_pixs = np.zeros(sn_y * sn_x)
        y_pixs = np.zeros(sn_y * sn_x)
        xpixs_line = np.linspace(1, xlen, sn_x)
        ypixs_line = np.linspace(1, ylen, sn_y)
        sky_coors = []
        for n1, y in enumerate(ypixs_line):
            for n2, x in enumerate(xpixs_line):
                i_pix = n1 * sn_x + n2
                x_pixs[i_pix] = x
                y_pixs[i_pix] = y
                pix_coor = np.array([x, y])
                sc1 = calcaluteSLSRotSkyCoor(pix_xy=pix_coor, rot_angle=rotate_chip, xlen=xlen, ylen=ylen, w=w)
                sky_coors.append((sc1[0, 0], sc1[0, 1]))
        wcs_new = fit_wcs_from_points(xy=np.array([x_pixs, y_pixs]), 
                                      world_coords=SkyCoord(sky_coors, frame="icrs", unit="deg"), 
                                      projection='TAN')
        r_dat['CD1_1'] = wcs_new.wcs.cd[0, 0]
        r_dat['CD1_2'] = wcs_new.wcs.cd[0, 1]
        r_dat['CD2_1'] = wcs_new.wcs.cd[1, 0]
        r_dat['CD2_2'] = wcs_new.wcs.cd[1, 1]
        r_dat['CRPIX1'] = wcs_new.wcs.crpix[0]
        r_dat['CRPIX2'] = wcs_new.wcs.crpix[1]

        r_dat['CRVAL1'] = wcs_new.wcs.crval[0]
        r_dat['CRVAL2'] = wcs_new.wcs.crval[1]
Fang Yuedong's avatar
Fang Yuedong committed
335

Fang Yuedong's avatar
Fang Yuedong committed
336
337
338
339
    else:
        raise ValueError('In function WCS_def(): Either (row_num, col_num) or (xcen, ycen, pixel_size) should be given')
    
    return r_dat
Fang Yuedong's avatar
Fang Yuedong committed
340

Xin Zhang's avatar
Xin Zhang committed
341
342


Fang Yuedong's avatar
Fang Yuedong committed
343
344
#TODO project_cycle is temporary, is not in header defined, delete in future
def generatePrimaryHeader(xlen = 9216, ylen = 9232, pointNum = '1', ra = 60, dec = -40, pixel_scale = 0.074, date='200930', time_obs='120000', im_type = 'MS', exptime=150., sat_pos = [0.,0.,0.], sat_vel = [0., 0., 0.], project_cycle=6, chip_name="01"):
Fang Yuedong's avatar
Fang Yuedong committed
345
346
347
348

    # array_size1, array_size2, flux, sigma = int(argv[1]), int(argv[2]), 1000.0, 5.0

    
Fang Yuedong's avatar
Fang Yuedong committed
349
    # k = (row_num-1)*6+col_num
Fang Yuedong's avatar
Fang Yuedong committed
350
351
    # ccdnum = str(k)

Xin Zhang's avatar
Xin Zhang committed
352
    g_header_fn = os.path.split(os.path.realpath(__file__))[0] + '/global_header.header'
Fang Yuedong's avatar
Fang Yuedong committed
353
354
355
356
357
358
359
360
361
362
363
364
365
    f = open(os.path.split(os.path.realpath(__file__))[0] + '/filter.lst')
    s = f.readline()
    s = s.strip("\n")
    filters = s.split(' ')
    s = f.readline()
    s = s.strip("\n")
    filterID = s.split()

    s = f.readline()
    s = s.strip("\n")
    CCDID = s.split()

    h_prim = fits.Header()
Xin Zhang's avatar
Xin Zhang committed
366
367
    h_prim = fits.Header.fromfile(g_header_fn)

Fang Yuedong's avatar
Fang Yuedong committed
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
    # h_prim['PIXSIZE1'] = xlen
    # h_prim['PIXSIZE2'] = ylen

    h_prim['DATE'] = '20'+date[0:2]+'-' + date[2:4]+'-'+date[4:6] + 'T' + time_obs[0:2]+':'+time_obs[2:4]+':'+time_obs[4:6]
    # h_prim['TIME'] = time_obs[0:2]+':'+time_obs[2:4]+':'+time_obs[4:6]
    h_prim['DATE-OBS'] = '20'+date[0:2]+'-' + date[2:4]+'-'+date[4:6] + 'T' + time_obs[0:2]+':'+time_obs[2:4]+':'+time_obs[4:6]
    # h_prim['TIME-OBS'] = time_obs[0:2]+':'+time_obs[2:4]+':'+time_obs[4:6]
    # h_prim['DETECTOR'] = 'CHIP'+CCDID[k-1].rjust(2,'0')
    h_prim['OBJ_RA'] = ra
    h_prim['OBJ_DEC'] = dec

    obs_type = {'SCI': '01', 'BIAS': '03', 'DARK': '07', 'FLAT': '11', 'CRS': '98', 'CRD': '99'}

    OBS_id = '1'+ obs_type[im_type] + str(int(project_cycle)) + pointNum.rjust(7,'0')

    h_prim['OBJECT'] = str(int(project_cycle)) + pointNum.rjust(7,'0')
    h_prim['OBSID'] = OBS_id
    # h_prim['TELFOCUS'] = 'f/14'
Fang Yuedong's avatar
Fang Yuedong committed
386
387
388
    h_prim['EXPTIME'] = exptime
    
    # Define file types
389
    file_type = {'SCI':'SCIE', 'BIAS':'BIAS', 'DARK':'DARK', 'FLAT':'FLAT', 'CRS':'CRS', 'CRD':'CRD','CALS':'CALS','CALF':'CALF'}
Fang Yuedong's avatar
Fang Yuedong committed
390
    h_prim['FILETYPE'] = file_type[im_type]
Xin Zhang's avatar
Xin Zhang committed
391
392
393

    co = coord.SkyCoord(ra, dec, unit='deg')

Fang Yuedong's avatar
Fang Yuedong committed
394
395
396
397
398
399
    ra_hms = format(co.ra.hms.h, '02.0f') + format(co.ra.hms.m, '02.0f') + format(co.ra.hms.s, '02.0f')
    dec_hms = format(co.dec.dms.d, '02.0f') + format(abs(co.dec.dms.m), '02.0f') + format(abs(co.dec.dms.s), '02.0f')
    h_prim['TARGET'] = ra_hms + '+' + dec_hms
    #
    # h_prim['RA_NOM'] = ra_hms
    # h_prim['DEC_NOM'] = dec_hms
Xin Zhang's avatar
Xin Zhang committed
400

Fang Yuedong's avatar
Fang Yuedong committed
401
402
403
404
    h_prim['RA_PNT0'] = ra
    h_prim['DEC_PNT0'] = dec
    h_prim['RA_PNT1'] = ra
    h_prim['DEC_PNT1'] = dec
Xin Zhang's avatar
Xin Zhang committed
405

Fang Yuedong's avatar
Fang Yuedong committed
406
407
408
409
410
411


    # h_prim['PIXSCAL1'] = pixel_scale
    # h_prim['PIXSCAL2'] = pixel_scale

    ttt = h_prim['DATE']
Xin Zhang's avatar
Xin Zhang committed
412
413
    tstart = Time(ttt)
    h_prim['EXPSTART'] = round(tstart.mjd, 5)
Fang Yuedong's avatar
Fang Yuedong committed
414
    h_prim['CABSTART'] = h_prim['EXPSTART']
Fang Yuedong's avatar
Fang Yuedong committed
415
416
    # tend = Time(tstart.cxcsec + h_prim['EXPTIME'], format="cxcsec")
    tend = Time(tstart.mjd + h_prim['EXPTIME']/86400., format="mjd")
Xin Zhang's avatar
Xin Zhang committed
417
    h_prim['EXPEND'] = round(tend.mjd, 5)
Fang Yuedong's avatar
Fang Yuedong committed
418
    h_prim['CABEND'] = h_prim['EXPEND']
Fang Yuedong's avatar
Fang Yuedong committed
419

Xin Zhang's avatar
Xin Zhang committed
420
421
422
    file_start_time = '20' + date[0:6] + time_obs[0:6]
    end_time_str = str(tend.datetime)
    file_end_time = end_time_str[0:4] + end_time_str[5:7]+end_time_str[8:10] + end_time_str[11:13] + end_time_str[14:16] + end_time_str[17:19]
Fang Yuedong's avatar
Fang Yuedong committed
423
424
    # h_prim['FILENAME'] = 'CSST_MSC_MS_' + im_type + '_' + file_start_time + '_' + file_end_time + '_' + OBS_id + '_' + CCDID[
    #     k - 1].rjust(2, '0') + '_L0_V01'
425
    h_prim['FILENAME'] = 'CSST_MSC_MS_' + file_type[im_type] + '_' + file_start_time + '_' + file_end_time + '_' + OBS_id + '_' + chip_name + '_L0_V01'
Xin Zhang's avatar
Xin Zhang committed
426

Xin Zhang's avatar
Xin Zhang committed
427
428
429
430
431
432
433
434

    h_prim['POSI0_X'] = sat_pos[0]
    h_prim['POSI0_Y'] = sat_pos[1]
    h_prim['POSI0_Z'] = sat_pos[2]

    h_prim['VELO0_X'] = sat_vel[0]
    h_prim['VELO0_Y'] = sat_vel[1]
    h_prim['VELO0_Z'] = sat_vel[2]
Fang Yuedong's avatar
Fang Yuedong committed
435
436
    # h_prim['RA_PNT0'] = ra_hms
    # h_prim['DEC_PNT0'] = dec_hms
437
438
439
    
    # Get version of CSSTSim Package
    from pkg_resources import get_distribution
Fang Yuedong's avatar
Fang Yuedong committed
440
    # h_prim['SIM_VER'] = (get_distribution("CSSTSim").version, "Version of CSST MSC simulation software")
441
442
443
444
    currentDateAndTime = datetime.now()
    compute_name = platform.node()
    h_prim['FITSCREA'] = get_distribution("CSSTSim").version +'_' + currentDateAndTime.strftime("%Y%m%d") + '_' +compute_name
    h_prim['EPOCH'] = round((Time(h_prim['EXPSTART'], format='mjd', scale='tcb')).jyear, 1)
Xin Zhang's avatar
Xin Zhang committed
445

Fang Yuedong's avatar
Fang Yuedong committed
446
447
    return h_prim

Fang Yuedong's avatar
Fang Yuedong committed
448
def generateExtensionHeader(chip, xlen = 9216, ylen = 9232,ra = 60, dec = -40, pa = -23.433, gain = 1.0, readout = 5.0, dark = 0.02, saturation=90000, pixel_scale = 0.074, pixel_size=1e-2, 
449
                            extName='SCI', row_num = None, col_num = None, xcen=None, ycen=None, timestamp = 1621915200,exptime = 150., readoutTime = 40.):
Fang Yuedong's avatar
Fang Yuedong committed
450

Xin Zhang's avatar
Xin Zhang committed
451
452
453
454
455
456
457
458
    e_header_fn = os.path.split(os.path.realpath(__file__))[0] + '/extension_header.header'
    f = open(os.path.split(os.path.realpath(__file__))[0] + '/filter.lst')
    s = f.readline()
    s = s.strip("\n")
    filters = s.split(' ')
    s = f.readline()
    s = s.strip("\n")
    filterID = s.split()
Fang Yuedong's avatar
Fang Yuedong committed
459

Xin Zhang's avatar
Xin Zhang committed
460
461
462
    s = f.readline()
    s = s.strip("\n")
    CCDID = s.split()
Fang Yuedong's avatar
Fang Yuedong committed
463

Fang Yuedong's avatar
Fang Yuedong committed
464
    # k = (row_num - 1) * 6 + col_num
Xin Zhang's avatar
Xin Zhang committed
465
466
467

    h_ext = fits.Header.fromfile(e_header_fn)

Fang Yuedong's avatar
Fang Yuedong committed
468
469
470
    # h_ext['CCDCHIP'] = CCDID[k - 1].rjust(2, '0')
    # h_ext['CCDLABEL'] = filters[k-1] + '-' + filterID[k-1]
    # h_ext['FILTER'] = filters[k-1]
471
472
    h_ext['CHIPID'] = str(chip.chipID).rjust(2, '0')
    h_ext['CHIPLAB'] = chip.chip_name
Fang Yuedong's avatar
Fang Yuedong committed
473
    h_ext['FILTER'] = chip.filter_type
Xin Zhang's avatar
Xin Zhang committed
474
475
476
    h_ext['NAXIS1'] = xlen
    h_ext['NAXIS2'] = ylen
    h_ext['EXTNAME'] = extName
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
    h_ext['GAIN01'] = chip.gain_channel[0]
    h_ext['GAIN02'] = chip.gain_channel[1]
    h_ext['GAIN03'] = chip.gain_channel[2]
    h_ext['GAIN04'] = chip.gain_channel[3]
    h_ext['GAIN05'] = chip.gain_channel[4]
    h_ext['GAIN06'] = chip.gain_channel[5]
    h_ext['GAIN07'] = chip.gain_channel[6]
    h_ext['GAIN08'] = chip.gain_channel[7]
    h_ext['GAIN09'] = chip.gain_channel[8]
    h_ext['GAIN10'] = chip.gain_channel[9]
    h_ext['GAIN11'] = chip.gain_channel[10]
    h_ext['GAIN12'] = chip.gain_channel[11]
    h_ext['GAIN13'] = chip.gain_channel[12]
    h_ext['GAIN14'] = chip.gain_channel[13]
    h_ext['GAIN15'] = chip.gain_channel[14]
    h_ext['GAIN16'] = chip.gain_channel[15]
    h_ext['RON01'] = readout
    h_ext['RON02'] = readout
    h_ext['RON03'] = readout
    h_ext['RON04'] = readout
    h_ext['RON05'] = readout
    h_ext['RON06'] = readout
    h_ext['RON07'] = readout
    h_ext['RON08'] = readout
    h_ext['RON09'] = readout
    h_ext['RON10'] = readout
    h_ext['RON11'] = readout
    h_ext['RON12'] = readout
    h_ext['RON13'] = readout
    h_ext['RON14'] = readout
    h_ext['RON15'] = readout
    h_ext['RON16'] = readout
Fang Yuedong's avatar
Fang Yuedong committed
509
510
511

    h_ext['PIXSCAL1'] = pixel_scale
    h_ext['PIXSCAL2'] = pixel_scale
512
513
514
515
516
517
518
519
520
521
522
523
524
    h_ext['EXPTIME'] = exptime
    h_ext['DARKTIME'] = exptime + 2

    datetime_obs = datetime.utcfromtimestamp(timestamp)
    tstart = Time(datetime_obs)
    tstart_read = Time(tstart.mjd + exptime / 86400., format="mjd")
    tend_read = Time(tstart.mjd + (exptime + readoutTime) / 86400., format="mjd")
    t_s1 = str(tstart_read.datetime).split()
    h_ext['READT0'] = t_s1[0]+'T'+t_s1[1]
    t_s2 = str(tend_read.datetime).split()
    h_ext['READT1'] = t_s2[0] + 'T' + t_s2[1]


Fang Yuedong's avatar
Fang Yuedong committed
525
526
527
528

    # h_ext['POS_ANG'] = pa
    header_wcs = WCS_def(xlen=xlen, ylen=ylen, gapy=898.0, gapx1=534, gapx2=1309, ra_ref=ra, dec_ref=dec, pa=pa, pixel_scale=pixel_scale, pixel_size=pixel_size, 
                         rotate_chip=chip.rotate_angle, filter = h_ext['FILTER'], row_num=row_num, col_num=col_num, xcen = xcen, ycen = ycen)
Xin Zhang's avatar
Xin Zhang committed
529
530
531
532
533
534
535
536
537

    h_ext['CRPIX1'] = header_wcs['CRPIX1']
    h_ext['CRPIX2'] = header_wcs['CRPIX2']
    h_ext['CRVAL1'] = header_wcs['CRVAL1']
    h_ext['CRVAL2'] = header_wcs['CRVAL2']
    h_ext['CD1_1'] = header_wcs['CD1_1']
    h_ext['CD1_2'] = header_wcs['CD1_2']
    h_ext['CD2_1'] = header_wcs['CD2_1']
    h_ext['CD2_2'] = header_wcs['CD2_2']
538
539
    # h_ext['EQUINOX'] = header_wcs['EQUINOX']
    # h_ext['WCSDIM'] = header_wcs['WCSDIM']
Xin Zhang's avatar
Xin Zhang committed
540
541
    h_ext['CTYPE1'] = header_wcs['CTYPE1']
    h_ext['CTYPE2'] = header_wcs['CTYPE2']
Fang Yuedong's avatar
Fang Yuedong committed
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576

    return h_ext



def main(argv):

    xlen = int(argv[1])
    ylen = int(argv[2])
    pointingNum = argv[3]
    ra = float(argv[4])
    dec = float(argv[5])
    pSize = float(argv[6])
    ccd_row_num = int(argv[7])
    ccd_col_num = int(argv[8])
    pa_aper = float(argv[9])
    gain = float(argv[10])
    readout = float(argv[11])
    dark = float(argv[12])
    fw = float(argv[13])



    h_prim = generatePrimaryHeader(xlen = xlen, ylen = ylen,ra = ra, dec = dec, psize = pSize, row_num = ccd_row_num, col_num = ccd_col_num, pointNum = pointingNum)

    h_ext = generateExtensionHeader(xlen = xlen, ylen = ylen,ra = ra, dec = dec, pa = pa_aper, gain = gain, readout = readout, dark = dark, saturation=fw, psize = pSize, row_num = ccd_row_num, col_num = ccd_col_num)
    hdu1 = fits.PrimaryHDU(header=h_prim)
    hdu2 = fits.ImageHDU(np.zeros([ylen,xlen]),header = h_ext)

    hdul = fits.HDUList([hdu1,hdu2])

    hdul.writeto(h_prim['FILENAME']+'.fits',output_verify='ignore')

# if __name__ == "__main__":
#     main(sys.argv)