update codestyle-PEP8

observation_sim/sim_steps/readout_output.py

@@ -17,13 +17,52 @@ def add_prescan_overscan(self, chip, filt, tel, pointing, catalog, obs_param):
                                      over1=chip.overscan_x,
                                      over2=chip.overscan_y)
 
-    if obs_param["add_dark"] == True:
+    if obs_param["add_dark"] is True:
         ny = int(chip.npix_y/2)
         base_dark = (ny-1)*(chip.readout_time/ny)*chip.dark_noise
         chip.img.array[(chip.prescan_y+ny):-(chip.prescan_y+ny), :] = base_dark
     return chip, filt, tel, pointing
 
 
+def add_crosstalk(self, chip, filt, tel, pointing, catalog, obs_param):
+    crosstalk=np.zeros([16,16])
+    crosstalk[0,:] = np.array([1., 1e-4, 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[1,:] = np.array([1e-4, 1., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[2,:] = np.array([0., 0., 1., 1e-4, 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[3,:] = np.array([0., 0., 1e-4, 1., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[4,:] = np.array([0., 0., 0., 0., 1., 1e-4, 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[5,:] = np.array([0., 0., 0., 0., 1e-4, 1., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[6,:] = np.array([0., 0., 0., 0., 0., 0., 1., 1e-4, 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[7,:] = np.array([0., 0., 0., 0., 0., 0., 1e-4, 1., 0., 0., 0., 0., 0., 0., 0., 0.])
+    crosstalk[8,:] = np.array([0., 0., 0., 0., 0., 0., 0., 0., 1., 1e-4, 0., 0., 0., 0., 0., 0.])
+    crosstalk[9,:] = np.array([0., 0., 0., 0., 0., 0., 0., 0., 1e-4, 1., 0., 0., 0., 0., 0., 0.])
+    crosstalk[10,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1., 1e-4, 0., 0., 0., 0.])
+    crosstalk[11,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1e-4, 1., 0., 0., 0., 0.])
+    crosstalk[12,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1., 1e-4, 0., 0.])
+    crosstalk[13,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1e-4, 1., 0., 0.])
+    crosstalk[14,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1., 1e-4])
+    crosstalk[15,:]= np.array([0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 1e-4, 1.])
+
+    # 2*8 -> 1*16
+    img = formatOutput(chip.img)
+    ny, nx = img.array.shape
+    nsecy=1
+    nsecx=16
+    dy = int(ny/nsecy)
+    dx = int(nx/nsecx)
+
+    newimg = galsim.Image(nx, ny, init_value=0)
+    for i in range(16):
+        for j in range(16):
+            newimg.array[:, int(i*dx):int(i*dx+dx)] += crosstalk[i,j]*img.array[:, int(j*dx):int(j*dx+dx)]
+
+    # 1*16 -> 2*8
+    newimg = formatRevert(newimg)
+    chip.img.array[:, :] = newimg.array[:, :]
+
+    return chip, filt, tel, pointing
+
+
 def add_readout_noise(self, chip, filt, tel, pointing, catalog, obs_param):
     seed = int(self.overall_config["random_seeds"]
                ["seed_readout"]) + pointing.id*30 + chip.chipID
@@ -36,13 +75,13 @@ def add_readout_noise(self, chip, filt, tel, pointing, catalog, obs_param):
 
 def apply_gain(self, chip, filt, tel, pointing, catalog, obs_param):
     self.chip_output.Log_info("  Applying Gain")
-    if obs_param["gain_16channel"] == True:
+    if obs_param["gain_16channel"] is True:
         chip.img, chip.gain_channel = effects.ApplyGainNonUniform16(chip.img,
                                                                     gain=chip.gain,
                                                                     nsecy=chip.nsecy,
                                                                     nsecx=chip.nsecx,
                                                                     seed=self.overall_config["random_seeds"]["seed_gainNonUniform"]+chip.chipID)
-    elif obs_param["gain_16channel"] == False:
+    elif obs_param["gain_16channel"] is False:
         chip.img /= chip.gain
         chip.gain_channel = np.ones(chip.nsecy*chip.nsecx)*chip.gain
     return chip, filt, tel, pointing
@@ -74,7 +113,7 @@ def quantization_and_output(self, chip, filt, tel, pointing, catalog, obs_param)
     self.updateHeaderInfo(header_flag='ext', keys=['GAIN01', 'GAIN02', 'GAIN03', 'GAIN04', 'GAIN05', 'GAIN06', 'GAIN07',
                           'GAIN08', 'GAIN09', 'GAIN10', 'GAIN11', 'GAIN12', 'GAIN13', 'GAIN14', 'GAIN15', 'GAIN16'], values=gains)
 
-    if obs_param["format_output"] == True:
+    if obs_param["format_output"] is True:
         self.chip_output.Log_info("  Apply 1*16 format")
         chip.img = chip_utils.formatOutput(GSImage=chip.img)
         chip.nsecy = 1