git init

##############################################################################

#                CREATION OF LIBRARIES FROM SEDs List                        #

# $LEPHAREDIR/source/sedtolib -t (S/Q/G) -c $LEPHAREDIR/config/zphot.para    #

# help : $LEPHAREDIR/source/sedtolib -h (or -help)                           #

##############################################################################

#

#------      STELLAR LIBRARY (ASCII SEDs)

STAR_SED	$LEPHAREDIR/sed/STAR/STAR_MOD.list	# STAR list (full path)

STAR_FSCALE	3.432E-09				# Arbitrary Flux Scale 

STAR_LIB	LIB_STAR				# Bin. STAR LIBRARY ->

							# $LEPHAREWORK/lib_bin

#

#------      QSO LIBRARY (ASCII SEDs) 

QSO_SED		$LEPHAREDIR/sed/QSO/QSO_MOD.list        # QSO list (full path)

QSO_FSCALE	1					# Arbitrary Flux Scale 

QSO_LIB		LIB_QSO					# Bin. QSO LIBRARY ->

							# $LEPHAREWORK/lib_bin

#

#------      GALAXY LIBRARY (ASCII or BINARY SEDs) 

GAL_SED	   $LEPHAREDIR/sed/GAL/CWW_KINNEY/CWW_MOD.list  # GAL list (full path)

GAL_FSCALE	1.					# Arbitrary Flux Scale

GAL_LIB		LIB_CWW  				# Bin. GAL LIBRARY ->

							# $LEPHAREWORK/lib_bin

#SEL_AGE   $LEPHAREDIR/sed/GAL/HYPERZ/AGE_GISSEL_ALL.dat # Age list(full path)

							# (def=NONE)	

AGE_RANGE  0.,13.e9                                     # Age Min-Max in yr

#

#############################################################################

#                           FILTERS                                         #

#  $LEPHAREDIR/source/filter  -c $LEPHAREDIR/config/zphot.para              #

#  help: $LEPHAREDIR/source/filter  -h (or -help)                           #

#############################################################################

#  Filter number and context 

#   f275 f435 f606 f775 f814  f850lp f105 f125 f140 f160 

#   1    2    3    4    5     6      7    8    9    10

#   1    2    4    8    16    32     64   128  256  512= 511 

#

FILTER_LIST hst_candles/f275w.dat,hst_candles/f435w.dat,hst_candles/f606w.dat,hst_candles/f775w.dat,hst_candles/f814w.dat,hst_candles/f850lp.dat,hst_candles/f105w.dat,hst_candles/f125w.dat,hst_candles/f140w.dat,hst_candles/f160w.dat

					# (in $LEPHAREDIR/filt/*)

TRANS_TYPE	0			# TRANSMISSION TYPE

                                        # 0[-def]: Energy, 1: Nb of photons

FILTER_CALIB    0                       # 0[-def]:  fnu=ctt 

                                        # 1      :  nu.fnu=ctt 

                                        # 2      :  fnu=nu 

                                        # 3      :  fnu=Black Body @ T=10000K

                                        # 4      :  for MIPS (leff with nu fnu=ctt and flux with BB @ 10000K  

FILTER_FILE	cosmos.filt		# output name of filter's file  ->

                                        # $LEPHAREWORK/filt/

#

############################################################################

#                 THEORETICAL  MAGNITUDES                                  #

# $LEPHAREDIR/source/mag_star -c  $LEPHAREDIR/config/zphot.para (star only)#

# help: $LEPHAREDIR/source/mag_star -h (or -help)                          #

# $LEPHAREDIR/source/mag_gal  -t (Q or G) -c $LEPHAREDIR/config/zphot.para #

#                                                         (for gal. & QSO) #

# help: $LEPHAREDIR/source/mag_gal  -h (or -help)                          #

############################################################################

#

#-------     From STELLAR LIBRARY   

STAR_LIB_IN	LIB_STAR      # Input  STELLAR LIBRARY in $LEPHAREWORK/lib_bin/

STAR_LIB_OUT	STAR_HDF      # Output STELLAR MAGN    -> $LEPHAREWORK/lib_mag/

#

#-------     From QSO     LIBRARY   

QSO_LIB_IN	LIB_QSO	      # Input  QSO LIBRARY  in $LEPHAREWORK/lib_bin/

QSO_LIB_OUT	QSO_HDF      # Output QSO MAGN     -> $LEPHAREWORK/lib_mag/

#

#-------     From GALAXY  LIBRARY  

GAL_LIB_IN	LIB_CWW	      # Input  GAL LIBRARY  in $LEPHAREWORK/lib_bin/

GAL_LIB_OUT	CWW_HDF      # Output GAL LIBRARY  -> $LEPHAREWORK/lib_mag/ 

#

#-------   MAG + Z_STEP + EXTINCTION + COSMOLOGY 

MAGTYPE         AB		     # Magnitude type (AB or VEGA)

Z_STEP 		0.04,6.,0.1 	     # dz, zmax, dzsup(if zmax>6) 

COSMOLOGY	70,0.3,0.7	     # H0,om0,lbd0    (if lb0>0->om0+lbd0=1)

MOD_EXTINC 	13,23,23,31,23,31,23,31		     # model range for extinction 

EXTINC_LAW	SMC_prevot.dat,SB_calzetti.dat,SB_calzetti_bump1.dat,SB_calzetti_bump2.dat	     # ext. law (in  $LEPHAREDIR/ext/*)

EB_V            0.000,0.100,0.200,0.300,0.400,0.500  # E(B-V) (<50 values)

EM_LINES        YES  

# Z_FORM 	8,7,6,5,4,3 	     # Zformation for each SED in GAL_LIB_IN

#

#-------   ASCII OUTPUT FILES OPTION

LIB_ASCII       NO		     # Writes output in ASCII

                                     # in working directory

#

############################################################################

#              PHOTOMETRIC REDSHIFTS                                       #

# $LEPHAREDIR/source/zphot -c $LEPHAREDIR/config/zphot.para                #

# help: $LEPHAREDIR/source/zphot -h (or -help)                             #

############################################################################ 

#  

#

#

#-------    Input Catalog Informations   

CAT_IN       $LEPHAREWORK/tst.in  # Input catalog  (full path) 

INP_TYPE     M		          # Input type      (F:Flux or M:MAG)

CAT_MAG      AB                   # Input Magnitude (AB or VEGA)

CAT_FMT      MEME  		  # MEME: (Mag,Err)i  

  		                  # MMEE: (Mag)i,(Err)i  

CAT_LINES    -99,-99             #  MIN and MAX RANGE of ROWS used in input cat [def:-99,-99]

CAT_TYPE     LONG	          # Input Format    (LONG,SHORT-def)

CAT_OUT	     $LEPHAREWORK/test/zphot_1.out	# Output catalog (full path) 

PARA_OUT     $LEPHAREWORK/config/zphot_output.para  # Ouput parameter (full path)

#

BD_SCALE     0		          # Bands used for scaling 

			          # (Sum 2^n; n=0->nbd-1, 0[-def]:all bands)

GLB_CONTEXT  -1		          # Overwrite Context (Sum 2^n; n=0->nbd-1,

                                  # 0       : all bands used,

                                  # -1[-def]: used context per object 

# FORB_CONTEXT -1                   # context for forbitten bands 

ERR_SCALE  0.03,0.02,0.02,0.02,0.04  # errors per band added in quadrature

ERR_FACTOR  1.0                    # error scaling factor 1.0 [-def] 

#

#-------    Theoretical libraries  

ZPHOTLIB    CWW_HDF,STAR_HDF,QSO_HDF    # Library used for Chi2 (max:3)

ADD_EMLINES  YES 

#

########    PHOTOMETRIC REDSHIFTS OPTIONS      ###########

# FIR LIBRARY 

FIR_LIB         NONE

FIR_LMIN         7.0           # Lambda Min (micron) for FIR analysis 

FIR_CONT        -1

FIR_SCALE       -1

FIR_FREESCALE    YES             # ALLOW FOR FREE SCALING 

FIR_SUBSTELLAR   NO

# PHYSICAL LIBRARY with Stochastic models from  BC07    

PHYS_LIB      NONE  

PHYS_CONT    -1

PHYS_SCALE   -1

PHYS_NMAX     100000  

#

#-------     Priors  

# MASS_SCALE	6.,16.		 # Lg(Scaling) min,max [0,0-def]

MAG_ABS 	-10.,-26.	 # Mabs_min , Mabs_max [0,0-def]

MAG_REF 	4		 # Reference number for band used by Mag_abs

# ZFORM_MIN	5,5,5,5,5,5,3,1	 # Min. Zformation per SED -> Age constraint

Z_RANGE        0.,99.99          # Z min-max used for the Galaxy library 

EBV_RANGE      0,9               # E(B-V) MIN-MAX RANGE of E(B-V) used  

# NZ_PRIOR      4,2,4                # I Band for prior on N(z)

#                          

#-------     Fixed Z   (need format LONG for input Cat)

ZFIX		YES		 # fixed z and search best model [YES,NO-def]

#

#-------     Parabolic interpolation for Zbest  

Z_INTERP	YES		 # redshift interpolation [YES,NO-def]

#

#-------  Analysis of normalized ML(exp-(0.5*Chi^2)) curve 

#-------  Secondary peak analysis 

DZ_WIN          0.5              # Window search for 2nd peaks [0->5;0.25-def]

MIN_THRES       0.1              # Lower threshold for 2nd peaks[0->1; 0.1-def]

#

#-------  Probability (in %) per redshift intervals

# PROB_INTZ     0,0.5,0.5,1.,1.,1.5     # even number 

#

#########    ABSOLUTE MAGNITUDES COMPUTATION   ###########

#

MABS_METHOD	1		 # 0[-def] : obs->Ref

                                 # 1 : best  obs->Ref

                                 # 2 : fixed obs->Ref

                                 # 3 : mag from best SED

                                 # 4 : Zbin

MABS_CONTEXT    -1               # CONTEXT for Band used for MABS 

MABS_REF	4		 # 0[-def]: filter obs chosen for Mabs :

				 # ONLY USED IF MABS_METHOD=2

MABS_FILT       1,2,3,4   	 # Chosen filters per redshift bin (MABS_ZBIN)

				 # ONLY USED IF MABS_METHOD=4 

MABS_ZBIN       0,0.5,1,1.5,2,3,3.5,4 # Redshift bins (even number) 

				 # ONLY USED IF MABS_METHOD=4

#########   OUTPUT SPECTRA                     ###########

#

SPEC_OUT	YES	 	 # spectrum for each object?  [YES,NO-def]

CHI2_OUT        NO               # output file with all values : z,mod,chi2,E(B-V),... 

                                 # BE CAREFUL can take a lot of space !!              

#########  OUTPUT PDZ ANALYSIS  

PDZ_OUT         NONE             # pdz output file name [def-NONE]

                                 # add automatically PDZ_OUT[.pdz/.mabsx/.mod/.zph] 

PDZ_MABS_FILT   2,10,14           # MABS for REF FILTERS to be extracted  

# 

#########   FAST MODE : color-space reduction        #####

#

FAST_MODE	NO 		 # Fast computation                [NO-def] 

COL_NUM		3 		 # Number of colors used           [3-def]

COL_SIGMA	3		 # Enlarge of the obs. color-errors[3-def]

COL_SEL		AND		 # Combination between used colors [AND/OR-def]

#

#########   MAGNITUDE SHIFTS applied to libraries   ######

#

# APPLY_SYSSHIFT  0.             # Apply systematic shifts in each band

                                 # used only if number of shifts matches

                                 # with number of filters in the library    

#

#########   ADAPTIVE METHOD using Z spectro sample     ###

#

AUTO_ADAPT	NO		 # Adapting method with spectro [NO-def]

ADAPT_BAND 	4,2,4		 # Reference band, band1, band2 for color 

ADAPT_LIM       18,22.0		 # Mag limits for spectro in Ref band [18,21.5-def]

ADAPT_POLY	1		 # Number of coef in  polynom (max=4) [1-def]

ADAPT_METH      1		 # Fit as a function of

				 # 1 : Color Model  [1-def]

                                 # 2 : Redshift

	 	                 # 3 : Models

ADAPT_CONTEXT  -1                # Context for bands used for training

                                 # -1[-def] used context per object

ADAPT_ZBIN     0.01,6            # Redshift's interval used for training

                                 # [0.001,6-Def]

ADAPT_MODBIN   1,1000            # Model's interval    used for training

                                 # [1,1000-Def]

ERROR_ADAPT     NO               # [YES,NO-def]

                                 # Add error in quadrature according to

                                 # the difference between observed

                                 # and predicted apparent magnitudes 

#

#######################################

# PHOTOMETRIC REDSHIFT with OPTIONS   #

#          Input catalog              #

# CAT_IN      : /Users/zhangxin/Work/SED_PRJ/superSim//outData/lp/spec/9386/iso.cat-CAT_OUT

# CAT_LINES     :        -99        -99

# INP_TYPE    : M

# CAT_MAG     : AB

# CAT_FMT[0:MEME 1:MMEE]:      0

#          Input library              #

# FILTER_FILE : candles.filt

# AB   0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 0.00000e+00 

#     1.572   -0.080    0.091    0.403    0.436    0.537    0.651    0.908    1.084    1.270

# ZPHOTLIB    : CWW_HDF 

# using       : LIB_CWW  

# ADD_EMLINES  : YES

# Z_STEP      :    0.04  3.00  0.10

# CHI2_RM_BD  :  10000.00 10000.00

# Z_RANGE     :    0.000   99.990

# EBV_RANGE   :    0.200    0.900

# Z_INTERP    : YES

# COSMOLOGY   :   70.00  0.30  0.70

# EXTINC_LAW  :   SMC_prevot.dat  SB_calzetti.dat  SB_calzetti_bump1.dat  SB_calzetti_bump2.dat

# EB_V        :   0.000 0.100 0.200 0.300 0.400 0.500

# MOD_EXTINC  :      13     23     23     31     23     31     23     31

# FAST_MODE   : NO

# ERR_SCALE   : -1.000 -1.000 -1.000 -1.000 -1.000

# ERR_FACTOR  :  1.000

#          Options                    #

# BD_SCALE    :        0

# GLB_CONTEXT :            0

# DZ_WIN      :  0.500

# MIN_THRES   :  0.100

# MASS_SCALE  :   0.00   0.00

# MAG_ABS     :   -10.00   -26.00

# MAG_REF     :         4

# PROB_INTZ   :  0.000

# MABS_METHOD :    1

# MABS_CONTEXT:         -1

# MABS_REF    :    4

# AUTO_ADAPT  : NO

# NZ_PRIOR    :         0        0        0

# ZFIX        : YES

# SPEC_OUT    : YES

# CHI2_OUT    : NO

# PDZ_OUT     : NONE

# CAT_OUT     : /Users/zhangxin/Work/SED_PRJ/superSim/LePhare//config/zphot_1.out

# PARA_OUT    : /Users/zhangxin/Work/SED_PRJ/superSim/LePhare//config/zphot_output.para

# CREATION_DATE: Wed Mar 16 13:31:06 2022

# Output format                       #

#  IDENT   1 , Z_BEST   2 , Z_ML   3 , CHI_BEST   4 , MOD_BEST   5 , 

#  EXTLAW_BEST   6 , EBV_BEST   7 , PDZ_BEST   8 , CONTEXT   9 , ZSPEC  10 , 

#  STRING_INPUT  10 , 

#######################################

IDENT

Z_BEST

#Z_BEST68_LOW

#Z_BEST68_HIGH

Z_ML

#Z_ML68_LOW

#Z_ML68_HIGH

#Z_BEST90_LOW

#Z_BEST90_HIGH

#Z_BEST99_LOW

#Z_BEST99_HIGH

CHI_BEST

MOD_BEST

EXTLAW_BEST

EBV_BEST

#ZF_BEST

#MAG_ABS_BEST

PDZ_BEST

#SCALE_BEST

#DIST_MOD_BEST

#NBAND_USED

#NBAND_ULIM

#

####### Z-2nd GALAXY  ###########

#Z_SEC

#CHI_SEC

#MOD_SEC

#AGE_SEC

#EBV_SEC

#ZF_SEC

#MAG_ABS_SEC

#PDZ_SEC

#SCALE_SEC

#

######## Z-Best QSO #############

#Z_QSO

#CHI_QSO

#MOD_QSO

#MAG_ABS_QSO

#DIST_MOD_QSO

######## Best STAR  #############

#MOD_STAR

#CHI_STAR

#

######## OBSERVED MAGNITUDES ####

#MAG_OBS()

#ERR_MAG_OBS()

########  MODEL MAGNITUDES FOR GALAXY  ####

#MAG_MOD()

#

######## K-COR , ABSOLUTE MAG, FILTER CHOICE  FOR GALAXY ##########

#K_COR()

#MAG_ABS()

#MABS_FILT()

#

######## K-COR , ABSOLUTE MAG. FOR QSO ##########

#K_COR_QSO()

#MAG_ABS_QSO()

#

####### PROBABILITY PER Z BINS ##

#PDZ()

#

####### INPUT INFO ##############

CONTEXT

ZSPEC

STRING_INPUT

#######  Far-IR  PARAMETERS  derived from  FIR_LIB  library  ###########

#LUM_TIR_BEST

#LIB_FIR

#MOD_FIR 

#CHI2_FIR

#FSCALE_FIR

#NBAND_FIR

#LUM_TIR_MED

#LUM_TIR_INF

#LUM_TIR_SUP

#MAG_MOD_FIR()

#MAG_ABS_FIR()

#K_COR_FIR()

#########  PHYSICAL PARAMETERS derived from  ZPHOTLIB  library IF DEFINED   ######

#AGE_BEST 

#AGE_INF

#AGE_MED

#AGE_SUP

##

#LDUST_BEST

#LDUST_INF

#LDUST_MED

#LDUST_SUP

##

#MASS_BEST

#MASS_INF

#MASS_MED

#MASS_SUP

#

#SFR_BEST

#SFR_INF

#SFR_MED

#SFR_SUP

#

#SSFR_BEST

#SSFR_INF

#SSFR_MED

#SSFR_SUP

#

#LUM_NUV_BEST

#LUM_R_BEST

#LUM_K_BEST

#########  PHYSICAL PARAMETERS  derived from PHYS_LIB library  

#  best Chi^2  or median+/-68% of the ML distribution  

#  1: Lg(Age[yr])           [1]

#  2: Lg(Lnuv[Lo])          [23]    3: Lg(Lr[Lo])            [24]

#  4: Lg(Lk[Lo])            [25]       

#  5: Lg(Ldust[Lo])         [5]     6: Lg(Mass[Mo])          [6]         

#  7: Lg(SFR_1e8[Mo/yr])    [8]     8: Lg(SFR_1e9[Mo/yr])    [9]

#  9: Gamma[Gyr]            [10]   10: Metallicity           [11]   

# 11: Tauv                  [12]   12: mu                    [13] 

# 13: Lg(Age_weightmass[yr])[14]   14: Lg(Age_weightLr[yr])  [15]

# 15: Lg(Age_Tlastburst[yr])[16]

# 16: Frac_burst<1.e8[yr]   [17]   17: Frac_burst<1e9[yr]    [18]

# 18: Nb burst              [21]

# 19: Lg(SSFR_1e8 [yr-1])   [42]   20: Lg(SSFR_1e9 [yr-1])   [43]

# 21: A(1500) [mag]         [26]   22: A(2300) [mag]         [27] 

# 23: A(4500) [mag]         [29]   24: A(6000) [mag]         [30] 

# 25: A(8500) [mag]         [31]   26: A(22000)[mag]         [32]            

# 27: A(3500) [mag]         [28] 

# 28: D4000                 [34]   29: Lg(Ldust_LC00)        [39]

# 30: F_mu[Ld(ISM)/Ld_LC00] [40]   31: eta[Ld(>4000)/Ld)]    [41]

# 32: Rec_Mass[(Mt-M*)/Mt]  [7] 

#####################################################

#PHYS_CHI2_BEST

#PHYS_MOD_BEST

#PHYS_MAG_MOD()

#PHYS_MAG_ABS()

#PHYS_K_COR()

#PHYS_PARA1_BEST

#PHYS_PARA2_BEST

#PHYS_PARA3_BEST

#PHYS_PARA4_BEST

#PHYS_PARA5_BEST

#PHYS_PARA6_BEST

#PHYS_PARA7_BEST

#PHYS_PARA8_BEST

#PHYS_PARA9_BEST

#PHYS_PARA10_BEST

#PHYS_PARA11_BEST

#PHYS_PARA12_BEST

#PHYS_PARA13_BEST

#PHYS_PARA14_BEST

#PHYS_PARA15_BEST

#PHYS_PARA16_BEST

#PHYS_PARA17_BEST

#PHYS_PARA18_BEST

#PHYS_PARA19_BEST

#PHYS_PARA20_BEST

#PHYS_PARA21_BEST

#PHYS_PARA22_BEST

#PHYS_PARA23_BEST

#PHYS_PARA24_BEST

#PHYS_PARA25_BEST

#PHYS_PARA26_BEST

#PHYS_PARA27_BEST

#  based on ML analysis with MEDIAN,68p_INF,68p_SUP values 

#PHYS_PARA1_MED

#PHYS_PARA2_MED

#PHYS_PARA3_MED

#PHYS_PARA4_MED

#PHYS_PARA5_MED

#PHYS_PARA6_MED

#PHYS_PARA7_MED

#PHYS_PARA8_MED

#PHYS_PARA9_MED

#PHYS_PARA10_MED

#PHYS_PARA11_MED

#PHYS_PARA12_MED

#PHYS_PARA13_MED

#PHYS_PARA14_MED

#PHYS_PARA15_MED

#PHYS_PARA16_MED

#PHYS_PARA17_MED

#PHYS_PARA18_MED

#PHYS_PARA19_MED

#PHYS_PARA20_MED

#PHYS_PARA21_MED

#PHYS_PARA22_MED

#PHYS_PARA23_MED

#PHYS_PARA24_MED

#PHYS_PARA25_MED

#PHYS_PARA26_MED

#PHYS_PARA27_MED

#PHYS_PARA1_INF

#PHYS_PARA2_INF

#PHYS_PARA3_INF

#PHYS_PARA4_INF

#PHYS_PARA5_INF

#PHYS_PARA6_INF

#PHYS_PARA7_INF

#PHYS_PARA8_INF

#PHYS_PARA9_INF

#PHYS_PARA10_INF

#PHYS_PARA11_INF

#PHYS_PARA12_INF

#PHYS_PARA13_INF

#PHYS_PARA14_INF

#PHYS_PARA15_INF

#PHYS_PARA16_INF

#PHYS_PARA17_INF

#PHYS_PARA18_INF

#PHYS_PARA19_INF

#PHYS_PARA20_INF

#PHYS_PARA21_INF

#PHYS_PARA22_INF

#PHYS_PARA23_INF

#PHYS_PARA24_INF

#PHYS_PARA25_INF

#PHYS_PARA26_INF

#PHYS_PARA27_INF

#PHYS_PARA1_SUP

#PHYS_PARA2_SUP

#PHYS_PARA3_SUP

#PHYS_PARA4_SUP

#PHYS_PARA5_SUP

#PHYS_PARA6_SUP

#PHYS_PARA7_SUP

#PHYS_PARA8_SUP

#PHYS_PARA9_SUP

#PHYS_PARA10_SUP

#PHYS_PARA11_SUP

#PHYS_PARA12_SUP

#PHYS_PARA13_SUP

#PHYS_PARA14_SUP

#PHYS_PARA15_SUP

#PHYS_PARA16_SUP

#PHYS_PARA17_SUP

#PHYS_PARA18_SUP

#PHYS_PARA19_SUP

#PHYS_PARA20_SUP

#PHYS_PARA21_SUP

#PHYS_PARA22_SUP

#PHYS_PARA23_SUP

#PHYS_PARA24_SUP

#PHYS_PARA25_SUP

#PHYS_PARA26_SUP

#PHYS_PARA27_SUP