Commit 6d5e6f7a authored by Fang Yuedong's avatar Fang Yuedong
Browse files

update submit script for Pukou machine

parent 53592d2e
......@@ -11,7 +11,7 @@
# can add some of the command-line arguments here as well;
# ok to pass either way or both, as long as they are consistent
work_dir: "/public/home/fangyuedong/project/workplace/"
run_name: "QSO_50sqdeg_test"
run_name: "magnification_test"
# Project cycle and run counter are used to name the outputs
project_cycle: 9
......
#!/bin/bash
#PBS -N C6_TEST
#PBS -l walltime=70:00:00
#PBS -j oe
##PBS -l nodes=wcl-1:ppn=16+wcl-2:ppn=16
#PBS -q batch
#PBS -u fangyuedong
cd $PBS_O_WORKDIR
#SBATCH -J CSSTSim
#SBATCH -N 1
#SBATCH --ntasks-per-node=40
#SBATCH -p debug
#SBATCH --mem=240G
NP=384
hostfile=wcl-1,wcl-2,wcl-3,wcl-4,wcl-5,wcl-6
module load mpi/hpcx/2.4.1/gcc-7.3.1
date
mpirun --oversubscribe -H $hostfile -np $NP python /share/home/fangyuedong/new_sim/csst-simulation/run_sim.py \
--config_file config_C6.yaml \
--catalog C6_Catalog \
-c /share/home/fangyuedong/new_sim/csst-simulation/config
# --config_file config_50sqdeg.yaml \
# --catalog C6_50sqdeg \
# -c /share/home/fangyuedong/new_sim/csst-simulation/config
#限定单节点任务数
srun hostname -s | sort -n | awk -F"-" '{print $2}' | uniq > pnodes
mpirun -mca pml ucx -x UCX_NET_DEVICES=mlx5_0:1 -machinefile pnodes -np 40 --map-by node python3 /public/home/fangyuedong/project/csst_msc_sim/run_sim.py --config_file config_overall.yaml --catalog C6_50sqdeg -c /public/home/fangyuedong/project/csst_msc_sim/config
\ No newline at end of file
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